def run(systemlist,paralist,unparalist,pinlist):
if unparalist[3] == 0 or time.time() - systemlist[2] >= unparalist[4]:
exit(systemlist[0], systemlist[1])
unparalist[0],unparalist[1] = arduino.monitor(paralist[0], unparalist[0], unparalist[1], systemlist[2], systemlist[3], pinlist[0], pinlist[1], systemlist[1],systemlist[4])
# if the rat achieve the criterion, that actions according to the time sequence
# during this section, all actions and presses that do not lead to reward are recorded to file as well
if unparalist[0] == paralist[0]:
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[1],systemlist[2],pinlist[0],systemlist[3],systemlist[0],systemlist[1])
#record the time that it achieves the criterion
unparalist[0] = arduino.us(paralist[2],pinlist[2],pinlist[0],systemlist[2],systemlist[3],systemlist[0],systemlist[1])
# for every certain trails, the criterion need to be increased
# the trails that increase the criterion is the number that dividable by 'gap'
if unparalist[2] % paralist[4]==0:
if paralist[3]=="random":
s=randint(1,3) # if user select random as step, randomly select it from one to three
print (s) # and print this step out
paralist[0] += s
else:
paralist[0] += paralist[3]
unparalist[3] -= 1
print("current times is: " + str(paralist[0])) # print the current criterion out
print("times to go: " + str(unparalist[3]))
print("time already pass: " + str(time.time() - systemlist[2]))
# recall itself every 1milisecond in order to keep monitoring the press
systemlist[1].after(1,run,systemlist,paralist,unparalist,pinlist)
def run(systemlist, paralist, unparalist, pinlist):
if unparalist[3] == 0 or time.time() - systemlist[2] >= unparalist[4]:
exit(systemlist[0], systemlist[1])
unparalist[0], unparalist[1] = arduino.monitor(
paralist[0], unparalist[0], unparalist[1], systemlist[2],
systemlist[3], pinlist[0], pinlist[1], systemlist[1], systemlist[4])
# if the rat achieve the criterion, that actions according to the time sequence
# during this section, all actions and presses that do not lead to reward are recorded to file as well
if unparalist[0] == paralist[0]:
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[1], systemlist[2], pinlist[0], systemlist[3],
systemlist[0], systemlist[1])
#record the time that it achieves the criterion
unparalist[0] = arduino.us(paralist[2], pinlist[2], pinlist[0],
systemlist[2], systemlist[3], systemlist[0],
systemlist[1])
# for every certain trails, the criterion need to be increased
# the trails that increase the criterion is the number that dividable by 'gap'
if unparalist[2] % paralist[4] == 0:
if paralist[3] == "random":
s = randint(
1, 3
) # if user select random as step, randomly select it from one to three
print(s) # and print this step out
paralist[0] += s
else:
paralist[0] += paralist[3]
unparalist[3] -= 1
print("current times is: " +
str(paralist[0])) # print the current criterion out
print("times to go: " + str(unparalist[3]))
print("time already pass: " + str(time.time() - systemlist[2]))
# recall itself every 1milisecond in order to keep monitoring the press
systemlist[1].after(1, run, systemlist, paralist, unparalist, pinlist)
def run():
global currenttimes
global upanddown
global totaltimes
global times
global interval
global duration
global step
global gap
currenttimes,upanddown = arduino.monitor(times, currenttimes, upanddown, starttime, output, buttonPin, LEDPin, top)
# if the rat achieve the criterion, that actions according to the time sequence
# during this section, all actions and presses that do not lead to reward are recorded to file as well
if currenttimes == times:
arduino.recordtime(starttime, output, "E")
arduino.delay(interval,starttime,buttonPin,output,board,top)
#record the time that it achieves the criterion
currenttimes = arduino.us(duration,servoPin,buttonPin,starttime,output,board,top)
# for every certain trails, the criterion need to be increased
# the trails that increase the criterion is the number that dividable by 'gap'
if totaltimes % gap==0:
if step=="random":
s=randint(1,3) # if user select random as step, randomly select it from one to three
print (s) # and print this step out
times+=s
else:
times+=step
print("current times is: " + str(times)) # print the current criterion out
# recall itself every 1milisecond in order to keep monitoring the press
top.after(1,run)
def rangemode():
global interval
global duration
global rangemin
global rangemax
global timeslist
global mode
global currenttimes
global upanddown
global thistimes
currenttimes, upanddown = arduino.monitor(thistimes, currenttimes,
upanddown, starttime, output,
buttonPin, LEDPin, top)
if currenttimes == thistimes:
#record the time that it achieves the criterion
arduino.recordtime(starttime, output, "E")
arduino.delay(interval, starttime, buttonPin, output, board, top)
currenttimes = arduino.us(duration, servoPin, buttonPin, starttime,
output, board, top)
thistimes = random.randint(
rangemin, rangemax) # select another criterion for new trial
print(thistimes)
# recall itself every 1milisecond in order to keep monitoring the press
top.after(1, rangemode)
def run(systemlist,paralist,unparalist,pinlist):
if unparalist[2] == 0 or time.time() - systemlist[2] >= unparalist[3]:
exit(systemlist[0], systemlist[1])
unparalist[0],unparalist[1] = arduino.monitor(paralist[0], unparalist[0], unparalist[1], systemlist[2], systemlist[3], pinlist[0], pinlist[1], systemlist[1],systemlist[4])
if unparalist[0] == paralist[0]:
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[1],systemlist[2],pinlist[0],systemlist[3],systemlist[0],systemlist[1])
unparalist[0] = arduino.us(paralist[2],pinlist[2],pinlist[0],systemlist[2],systemlist[3],systemlist[0],systemlist[1])
unparalist[2] -= 1
print("times to go: " + str(unparalist[2]))
print("time already pass: " + str(time.time() - systemlist[2]))
# recall itself every 1milisecond in order to keep monitoring the press
systemlist[1].after(1,run,systemlist,paralist,unparalist,pinlist)
def run():
global interval
global duration
global times
global currenttimes
global upanddown
global temp
currenttimes,upanddown = arduino.monitor(times, currenttimes, upanddown, starttime, output, buttonPin, LEDPin, top)
if currenttimes == times:
arduino.recordtime(starttime, output, "E")
arduino.delay(interval,starttime,buttonPin,output,board,top)
currenttimes = arduino.us(duration,servoPin,buttonPin,starttime,output,board,top)
# recall itself every 1milisecond in order to keep monitoring the press
top.after(1,run)
def rangemode(systemlist,paralist,unparalist,pinlist):
if unparalist[2] == 0 or time.time() - systemlist[2] >= unparalist[3]:
exit(systemlist[0], systemlist[1])
unparalist[0],unparalist[1] = arduino.monitor(paralist[8], unparalist[0], unparalist[1], systemlist[2], systemlist[3], pinlist[0], pinlist[1], systemlist[1],systemlist[4])
if unparalist[0] == paralist[8]:
#record the time that it achieves the criterion
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[0],systemlist[2],pinlist[0],systemlist[3],systemlist[0],systemlist[1])
unparalist[0] = arduino.us(paralist[1],pinlist[2],pinlist[0],systemlist[2],systemlist[3],systemlist[0],systemlist[1])
paralist[8] = random.randint(paralist[2], paralist[3]) # select another criterion for new trial
print("This time is " + str(paralist[8]))
unparalist[2] -= 1
print("times to go: " + str(unparalist[2]))
print("time already pass: " + str(time.time() - systemlist[2]))
# recall itself every 1milisecond in order to keep monitoring the press
systemlist[1].after(1,rangemode,systemlist,paralist,unparalist,pinlist)
def listmode(systemlist,paralist,unparalist,pinlist):
if unparalist[2] == 0 or time.time() - systemlist[2] >= unparalist[3]:
exit(systemlist[0], systemlist[1])
unparalist[0],unparalist[1] = arduino.monitor(paralist[8], unparalist[0], unparalist[1], systemlist[2], systemlist[3], pinlist[0], pinlist[1], systemlist[1],systemlist[4])
# feed
if unparalist[0] == paralist[8]:
#record the time that it achieves the criterion
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[0],systemlist[2],pinlist[0],systemlist[3],systemlist[0],systemlist[1])
unparalist[0] = arduino.us(paralist[1],pinlist[2],pinlist[0],systemlist[2],systemlist[3],systemlist[0],systemlist[1])
paralist[8]=random.choice(paralist[4])
print("This time is " + str(paralist[8]))
unparalist[2] -= 1
print("times to go: " + str(unparalist[2]))
print("time already pass: " + str(time.time() - systemlist[2]))
systemlist[1].after(1,listmode,systemlist,paralist,unparalist,pinlist)
def run():
global interval
global duration
global times
global currenttimes
global upanddown
global temp
currenttimes, upanddown = arduino.monitor(times, currenttimes, upanddown,
starttime, output, buttonPin,
LEDPin, top)
if currenttimes == times:
arduino.recordtime(starttime, output, "E")
arduino.delay(interval, starttime, buttonPin, output, board, top)
currenttimes = arduino.us(duration, servoPin, buttonPin, starttime,
output, board, top)
# recall itself every 1milisecond in order to keep monitoring the press
top.after(1, run)
def loop():
global estado, estado2, cont
value = arduino.analogRead(13)
millivolts = 1100 * value / 1.1 #max volts for analog in is 1.1V
db = millivolts / 10
print(db, "DB")
estado2 = arduino.digitalRead(8)
if estado2: #this means high or you can write if estado2==1
estado = arduino.digitalRead(7)
if estado:
arduino.delay(500)
cont += 1
if cont==1:
arduino.digitalWrite(A, 1)
arduino.digitalWrite(B, 1)
arduino.digitalWrite(C, 1)
arduino.digitalWrite(D, 1)
arduino.digitalWrite(E, 1)
def listmode():
global interval
global duration
global rangemin
global rangemax
global timeslist
global mode
global currenttimes
global upanddown
global thistimes
currenttimes,upanddown = arduino.monitor(thistimes, currenttimes, upanddown, starttime, output, buttonPin, LEDPin, top)
# feed
if currenttimes == thistimes:
arduino.recordtime(starttime, output, "E")
arduino.delay(interval,starttime,buttonPin,output,board,top)
currenttimes = arduino.us(duration,servoPin,buttonPin,starttime,output,board,top)
thistimes=random.choice(timeslist)
print(thistimes)
top.after(1,listmode)
def listmode(systemlist, paralist, unparalist, pinlist):
if unparalist[2] == 0 or time.time() - systemlist[2] >= unparalist[3]:
exit(systemlist[0], systemlist[1])
unparalist[0], unparalist[1] = arduino.monitor(
paralist[8], unparalist[0], unparalist[1], systemlist[2],
systemlist[3], pinlist[0], pinlist[1], systemlist[1], systemlist[4])
# feed
if unparalist[0] == paralist[8]:
#record the time that it achieves the criterion
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[0], systemlist[2], pinlist[0], systemlist[3],
systemlist[0], systemlist[1])
unparalist[0] = arduino.us(paralist[1], pinlist[2], pinlist[0],
systemlist[2], systemlist[3], systemlist[0],
systemlist[1])
paralist[8] = random.choice(paralist[4])
print("This time is " + str(paralist[8]))
unparalist[2] -= 1
print("times to go: " + str(unparalist[2]))
print("time already pass: " + str(time.time() - systemlist[2]))
systemlist[1].after(1, listmode, systemlist, paralist, unparalist, pinlist)
def rangemode():
global interval
global duration
global rangemin
global rangemax
global timeslist
global mode
global currenttimes
global upanddown
global thistimes
currenttimes,upanddown = arduino.monitor(thistimes, currenttimes, upanddown, starttime, output, buttonPin, LEDPin, top)
if currenttimes == thistimes:
#record the time that it achieves the criterion
arduino.recordtime(starttime, output, "E")
arduino.delay(interval,starttime,buttonPin,output,board,top)
currenttimes = arduino.us(duration,servoPin,buttonPin,starttime,output,board,top)
thistimes = random.randint(rangemin, rangemax) # select another criterion for new trial
print(thistimes)
# recall itself every 1milisecond in order to keep monitoring the press
top.after(1,rangemode)
def run(systemlist, paralist, unparalist, pinlist):
if unparalist[3] == 0 or time.time() - systemlist[2] >= unparalist[4]:
exit(systemlist[0], systemlist[1], pinlist[1], pinlist[2])
# if the difference between current and the start point of the trial is the paralist[2] of sd
# in this statement, use very closing value to represent the equal condition
# because the loop will be called every 1ms, regarding the deviation, the range is better than exactly equal
# this means that the rat has not achieved the criterion so that the sd is not turn off
if (time.time() - unparalist[2]) > (paralist[3] - 0.001) and (
time.time() - unparalist[2]) < (paralist[3] + 0.001):
#calculate the relative time for the press
arduino.recordtime(systemlist[2], systemlist[3], "SDE")
pinlist[2].write(0) # turn off SD
# wait for paralist[4] paralist[1]
# the reason that break down the delay is in order to update the condition to GUI window
# to avoid it fall into 'No responding'
# also, during this process, useless presses can be detected and recorded
arduino.delay(paralist[4], systemlist[2], pinlist[0], systemlist[3],
systemlist[0], systemlist[1])
unparalist[0] = 0 # reset the value
arduino.recordtime(systemlist[2], systemlist[3], "SDE")
# if the count is greater than one,
# which means there remain some trails, start a new trial
arduino.recordtime(systemlist[2], systemlist[3], "SDS")
pinlist[2].write(1) # turn on SD
unparalist[2] = time.time() # get the start time of the new trial
unparalist[0], unparalist[1] = arduino.monitor(
paralist[0], unparalist[0], unparalist[1], systemlist[2],
systemlist[3], pinlist[0], pinlist[1], systemlist[1], systemlist[4])
# if the rat achieve the criterion, that actions according to the time sequence
# during this section, all actions and presses that do not lead to reward are recorded to file as well
if unparalist[0] == paralist[0]:
pinlist[2].write(0) # stop SD first
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[1], systemlist[2], pinlist[0], systemlist[3],
systemlist[0], systemlist[1])
unparalist[0] = arduino.us(paralist[2], pinlist[3], pinlist[0],
systemlist[2], systemlist[3], systemlist[0],
systemlist[1])
# after feeding
# wait for paralist[4] paralist[1] and record the useless presses
arduino.delay(paralist[4], systemlist[2], pinlist[0], systemlist[3],
systemlist[0], systemlist[1])
# if the count is greater than one,
# which means there remain some trails, start a new trial
arduino.recordtime(systemlist[2], systemlist[3], "SDS")
pinlist[2].write(1)
unparalist[3] -= 1
print("times to go: " + str(unparalist[3]))
print("time already pass: " + str(time.time() - systemlist[2]))
unparalist[2] = time.time() # get the start time of the new trial
# recall itself every 1 milisecond in order to keep monitoring the press
systemlist[1].after(1, run, systemlist, paralist, unparalist, pinlist)
def listmode():
global interval
global duration
global rangemin
global rangemax
global timeslist
global mode
global currenttimes
global upanddown
global thistimes
currenttimes, upanddown = arduino.monitor(thistimes, currenttimes,
upanddown, starttime, output,
buttonPin, LEDPin, top)
# feed
if currenttimes == thistimes:
arduino.recordtime(starttime, output, "E")
arduino.delay(interval, starttime, buttonPin, output, board, top)
currenttimes = arduino.us(duration, servoPin, buttonPin, starttime,
output, board, top)
thistimes = random.choice(timeslist)
print(thistimes)
top.after(1, listmode)
def rangemode(systemlist, paralist, unparalist, pinlist):
if unparalist[2] == 0 or time.time() - systemlist[2] >= unparalist[3]:
exit(systemlist[0], systemlist[1])
unparalist[0], unparalist[1] = arduino.monitor(
paralist[8], unparalist[0], unparalist[1], systemlist[2],
systemlist[3], pinlist[0], pinlist[1], systemlist[1], systemlist[4])
if unparalist[0] == paralist[8]:
#record the time that it achieves the criterion
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[0], systemlist[2], pinlist[0], systemlist[3],
systemlist[0], systemlist[1])
unparalist[0] = arduino.us(paralist[1], pinlist[2], pinlist[0],
systemlist[2], systemlist[3], systemlist[0],
systemlist[1])
paralist[8] = random.randint(
paralist[2], paralist[3]) # select another criterion for new trial
print("This time is " + str(paralist[8]))
unparalist[2] -= 1
print("times to go: " + str(unparalist[2]))
print("time already pass: " + str(time.time() - systemlist[2]))
# recall itself every 1milisecond in order to keep monitoring the press
systemlist[1].after(1, rangemode, systemlist, paralist, unparalist,
pinlist)
def run():
global currenttimes
global upanddown
global totaltimes
global times
global interval
global duration
global step
global gap
currenttimes, upanddown = arduino.monitor(times, currenttimes, upanddown,
starttime, output, buttonPin,
LEDPin, top)
# if the rat achieve the criterion, that actions according to the time sequence
# during this section, all actions and presses that do not lead to reward are recorded to file as well
if currenttimes == times:
arduino.recordtime(starttime, output, "E")
arduino.delay(interval, starttime, buttonPin, output, board, top)
#record the time that it achieves the criterion
currenttimes = arduino.us(duration, servoPin, buttonPin, starttime,
output, board, top)
# for every certain trails, the criterion need to be increased
# the trails that increase the criterion is the number that dividable by 'gap'
if totaltimes % gap == 0:
if step == "random":
s = randint(
1, 3
) # if user select random as step, randomly select it from one to three
print(s) # and print this step out
times += s
else:
times += step
print("current times is: " +
str(times)) # print the current criterion out
# recall itself every 1milisecond in order to keep monitoring the press
top.after(1, run)
def run(systemlist,paralist,unparalist,pinlist):
if unparalist[3] == 0 or time.time() - systemlist[2] >= unparalist[4]:
exit(systemlist[0], systemlist[1],pinlist[1],pinlist[2])
# if the difference between current and the start point of the trial is the paralist[2] of sd
# in this statement, use very closing value to represent the equal condition
# because the loop will be called every 1ms, regarding the deviation, the range is better than exactly equal
# this means that the rat has not achieved the criterion so that the sd is not turn off
if (time.time() - unparalist[2]) > (paralist[3] - 0.001) and (time.time() - unparalist[2]) < (paralist[3] + 0.001):
#calculate the relative time for the press
arduino.recordtime(systemlist[2], systemlist[3], "SDE")
pinlist[2].write(0) # turn off SD
# wait for paralist[4] paralist[1]
# the reason that break down the delay is in order to update the condition to GUI window
# to avoid it fall into 'No responding'
# also, during this process, useless presses can be detected and recorded
arduino.delay(paralist[4],systemlist[2],pinlist[0],systemlist[3],systemlist[0],systemlist[1])
unparalist[0] = 0 # reset the value
arduino.recordtime(systemlist[2], systemlist[3], "SDE")
# if the count is greater than one,
# which means there remain some trails, start a new trial
arduino.recordtime(systemlist[2], systemlist[3], "SDS")
pinlist[2].write(1) # turn on SD
unparalist[2] = time.time() # get the start time of the new trial
unparalist[0],unparalist[1] = arduino.monitor(paralist[0], unparalist[0], unparalist[1], systemlist[2], systemlist[3], pinlist[0], pinlist[1], systemlist[1],systemlist[4])
# if the rat achieve the criterion, that actions according to the time sequence
# during this section, all actions and presses that do not lead to reward are recorded to file as well
if unparalist[0] == paralist[0]:
pinlist[2].write(0) # stop SD first
arduino.recordtime(systemlist[2], systemlist[3], "E")
arduino.delay(paralist[1],systemlist[2],pinlist[0],systemlist[3],systemlist[0],systemlist[1])
unparalist[0] = arduino.us(paralist[2],pinlist[3],pinlist[0],systemlist[2],systemlist[3],systemlist[0],systemlist[1])
# after feeding
# wait for paralist[4] paralist[1] and record the useless presses
arduino.delay(paralist[4],systemlist[2],pinlist[0],systemlist[3],systemlist[0],systemlist[1])
# if the count is greater than one,
# which means there remain some trails, start a new trial
arduino.recordtime(systemlist[2], systemlist[3], "SDS")
pinlist[2].write(1)
unparalist[3] -= 1
print("times to go: " + str(unparalist[3]))
print("time already pass: " + str(time.time() - systemlist[2]))
unparalist[2] = time.time() # get the start time of the new trial
# recall itself every 1 milisecond in order to keep monitoring the press
systemlist[1].after(1,run,systemlist,paralist,unparalist,pinlist)
def run():
global trials
global times
global interval
global duration
global sdinterval
global intertrial
global upanddown
global currenttimes
global looptime
# if the difference between current and the start point of the trial is the duration of sd
# in this statement, use very closing value to represent the equal condition
# because the loop will be called every 1ms, regarding the deviation, the range is better than exactly equal
# this means that the rat has not achieved the criterion so that the sd is not turn off
if (time.time() - looptime) > (sdinterval - 0.001) and (time.time() - looptime) < (sdinterval + 0.001):
#calculate the relative time for the press
arduino.recordtime(starttime, output, "SDE")
sdPin.write(0) # turn off SD
# wait for intertrial interval
# the reason that break down the delay is in order to update the condition to GUI window
# to avoid it fall into 'No responding'
# also, during this process, useless presses can be detected and recorded
arduino.delay(intertrial,starttime,buttonPin,output,board,top)
currenttimes = 0 # reset the value
arduino.recordtime(starttime, output, "SDE")
trials -= 1 # finish a trial and decrease the count by 1
# if the count is greater than one,
# which means there remain some trails, start a new trial
if trials == 0:
exit()
arduino.recordtime(starttime, output, "SDS")
sdPin.write(1) # turn on SD
looptime = time.time() # get the start time of the new trial
currenttimes,upanddown = arduino.monitor(times, currenttimes, upanddown, starttime, output, buttonPin, LEDPin, top)
# if the rat achieve the criterion, that actions according to the time sequence
# during this section, all actions and presses that do not lead to reward are recorded to file as well
if currenttimes == times:
sdPin.write(0) # stop SD first
arduino.recordtime(starttime, output, "E")
arduino.delay(interval,starttime,buttonPin,output,board,top)
currenttimes = arduino.us(duration,servoPin,buttonPin,starttime,output,board,top)
trials -= 1 # finish a trial and decrease the trial by 1
# after feeding
# wait for intertrial interval and record the useless presses
arduino.delay(intertrial,starttime,buttonPin,output,board,top)
# if the count is greater than one,
# which means there remain some trails, start a new trial
if trials == 0:
exit()
arduino.recordtime(starttime, output, "SDS")
sdPin.write(1)
looptime = time.time() # get the start time of the new trial
# recall itself every 1 milisecond in order to keep monitoring the press
top.after(1,run)
