Python Component Examples

Example #1

File: server.py Project: jflozanor/python-astm-1

__all__ = [
    'RecordsDispatcher', 'Header', 'Patient', 'Order', 'Result', 'Query',
    'Terminator', 'Instrument', 'Test', 'Specimen', 'TestType', 'Sample',
    'QcInfo', 'ResultValue', 'ResultRange'
]

#: Specimen information structure.
#:
#: :param patient_id: 病人ID. Length: 30
#: :type patient_id: str
#:
#: :param barcode: 样本条码. Length: 27
#: :type barcode: str
#:

Specimen = Component.build(TextField(name='patient_id', length=30),
                           TextField(name='barcode', length=27))

#: Instrument (analyser) information structure.
#:
#: :param name: 消息发送者. Length: 16
#: :type name: str
#:
#: :param device_id: 设备ID. Length: 10
#: :type device_id: integer
#:
Instrument = Component.build(TextField(name='name', length=16),
                             IntegerField(name='device_id', length=10))

#: Test :class:`~astm.mapping.Component`
#:
#: :param assay_code: 项目通道号 Required. Length: 10

Example #2

__all__ = [
    'Header', 'Patient', 'Order', 'Result', 'Comment', 'Terminator',
    'CommentData', 'PatientAge', 'Sender', 'Test'
]

#: Patient age structure.
#:
#: :param value: Age value.
#: :type value: int
#:
#: :param unit: Age unit. One of: ``years``, ``months``, ``days``.
#: :type unit: str
#:
PatientAge = Component.build(
    IntegerField(name='value'),
    SetField(name='unit', values=('years', 'months', 'days')))

#: Test :class:`~astm.mapping.Component` also known as Universal Test ID.
#:
#: :param _: Reserved. Not used.
#: :type _: None
#:
#: :param __: Reserved. Not used.
#: :type __: None
#:
#: :param ___: Reserved. Not used.
#: :type ___: None
#:
#: :param assay_code: Assay code. Required. Length: 20.
#: :type assay_code: str

Example #3

File: sofia.py Project: hofstaetter/windoc-sofia-server

from astm.mapping import (Component, ConstantField, ComponentField, DateField,
                          DateTimeField, IntegerField, SetField, TextField,
                          NotUsedField)
from astm.records import (HeaderRecord, PatientRecord, OrderRecord,
                          ResultRecord, CommentRecord, TerminatorRecord)

Sender = Component.build(TextField(name='name'), TextField(name='version'))
Test = Component.build(NotUsedField(name='_'), NotUsedField(name='__'),
                       NotUsedField(name='___'),
                       TextField(name='analyte_name', required=True))


class Header(HeaderRecord):
    sender = ComponentField(Sender)
    processing_id = ConstantField(default='P')
    version = TextField(name='version', default='E 1394-97')


class Patient(PatientRecord):
    practice_id = TextField(name='practice_id', required=True)
    location = TextField(name='location')


class Order(OrderRecord):
    sample_id = TextField(name='sample_id')
    test = TextField(name='test')
    collector = TextField(name='collector')
    biomaterial = TextField(name='biomaterial')


class Comment(CommentRecord):

Example #4

from astm.mapping import (Component, ConstantField, ComponentField, DateField,
                          DateTimeField, IntegerField, SetField, TextField,
                          NotUsedField, Record)
from astm.records import (HeaderRecord, PatientRecord, OrderRecord,
                          ResultRecord, CommentRecord, TerminatorRecord)

#: Information about sender.
#:
#: :param name: Name.
#: :type name: str
#:
#: :param version: Sender software version.
#: :type version: str
#:
Sender = Component.build(
    TextField(name='name', default='lianyang-LIS', length=40),
    TextField(name='version', default=__version__, length=20),
    TextField(name='serial', length=20))

#: Patient name structure.
#:
#: :param last: Last name. Length: 50.
#: :type last: str
#:
#: :param first: First name. Length: 50.
#: :type first: str
#:
PatientName = Component.build(TextField(name='last', length=50),
                              TextField(name='first', length=50))

#: User name structure.
#:

Example #5

from astm import __version__
from astm.mapping import (Component, ConstantField, ComponentField, DateField,
                          DateTimeField, IntegerField, SetField, TextField)
from astm.records import (HeaderRecord, PatientRecord, OrderRecord,
                          ResultRecord, CommentRecord, TerminatorRecord)

#: Information about sender.
#:
#: :param name: Name.
#: :type name: str
#:
#: :param version: Sender software version.
#: :type version: str
#:
Sender = Component.build(TextField(name='name', default='python-astm'),
                         TextField(name='version', default=__version__))

#: Patient name structure.
#:
#: :param last: Last name. Length: 50.
#: :type last: str
#:
#: :param first: First name. Length: 50.
#: :type first: str
#:
PatientName = Component.build(TextField(name='last', length=50),
                              TextField(name='first', length=50))


class Header(HeaderRecord):
    """ASTM header record.

Example #6

#: :param __: Reserved. Not used.
#: :type __: None
#:
#: :param ___: Reserved. Not used.
#: :type ___: None
#:
#: :param assay_code: Assay code. Required. Length: 20.
#: :type assay_code: str
#:
#: :param assay_name: Assay name. Length: 8.
#: :type assay_name: str
#:
Test = Component.build(
    NotUsedField(name='_'),
    NotUsedField(name='__'),
    NotUsedField(name='___'),
    TextField(name='assay_code', required=True, length=20),
    TextField(name='assay_name', length=8),
)

#: Comment control data structure.
#:
CommentData = Component.build(
    SetField(name='code', values=('PC', 'RC', 'SC', 'TC')),
    TextField(name='value'))


class Patient(CommonPatient):
    """ASTM patient record.

    :param type: Record Type ID. Always ``P``.

Example #7

File: common.py Project: gomsun2/python-astm

)
from astm.records import (
    HeaderRecord, PatientRecord, OrderRecord, ResultRecord, CommentRecord,
    TerminatorRecord
)

#: Information about sender.
#:
#: :param name: Name.
#: :type name: str
#:
#: :param version: Sender software version.
#: :type version: str
#:
Sender = Component.build(
    TextField(name='name', default='python-astm'),
    TextField(name='version', default=__version__)
)


#: Patient name structure.
#:
#: :param last: Last name. Length: 50.
#: :type last: str
#:
#: :param first: First name. Length: 50.
#: :type first: str
#:
PatientName = Component.build(
    TextField(name='last', length=50),
    TextField(name='first', length=50)
)

Example #8

]

#: Instrument (analyser) information structure.
#:
#: :param _: Reserved. Not used.
#: :type _: None
#:
#: :param rack: Rack number. Length: 5.
#: :type rack: str
#:
#: :param position: Position number. Length: 3.
#: :type position: str
#:
Instrument = Component.build(
    TextField(name='_'),
    TextField(name='rack', length=5),
    TextField(name='position', length=3),
)

#: Test :class:`~astm.mapping.Component` also known as Universal Test ID.
#:
#: :param _: Reserved. Not used.
#: :type _: None
#:
#: :param __: Reserved. Not used.
#: :type __: None
#:
#: :param ___: Reserved. Not used.
#: :type ___: None
#:
#: :param assay_code: Assay code. Required. Length: 20.

Example #9

File: server.py Project: gomsun2/python-astm

           'Sender', 'Test']

#: Instrument (analyser) information structure.
#:
#: :param _: Reserved. Not used.
#: :type _: None
#:
#: :param rack: Rack number. Length: 5.
#: :type rack: str
#:
#: :param position: Position number. Length: 3.
#: :type position: str
#:
Instrument = Component.build(
    TextField(name='_'),
    TextField(name='rack', length=5),
    TextField(name='position', length=3),
)


#: Test :class:`~astm.mapping.Component` also known as Universal Test ID.
#:
#: :param _: Reserved. Not used.
#: :type _: None
#:
#: :param __: Reserved. Not used.
#: :type __: None
#:
#: :param ___: Reserved. Not used.
#: :type ___: None
#:

Example #10

File: client.py Project: gomsun2/python-astm

    Sender
)

__all__ = ['Header', 'Patient', 'Order', 'Result', 'Comment', 'Terminator',
           'CommentData', 'PatientAge', 'Sender', 'Test']

#: Patient age structure.
#:
#: :param value: Age value.
#: :type value: int
#:
#: :param unit: Age unit. One of: ``years``, ``months``, ``days``.
#: :type unit: str
#:
PatientAge = Component.build(
    IntegerField(name='value'),
    SetField(name='unit', values=('years', 'months', 'days'))
)

#: Test :class:`~astm.mapping.Component` also known as Universal Test ID.
#:
#: :param _: Reserved. Not used.
#: :type _: None
#:
#: :param __: Reserved. Not used.
#: :type __: None
#:
#: :param ___: Reserved. Not used.
#: :type ___: None
#:
#: :param assay_code: Assay code. Required. Length: 20.
#: :type assay_code: str