def build_coeff_tables():
"""
Use the latest throughput values to build Table 2. Requires LSST stack installed and
syseng_throughputs setup
"""
from calcM5 import calcM5
import bandpassUtils as bu
from lsst.utils import getPackageDir
defaultDirs = bu.setDefaultDirs(
rootDir=getPackageDir('syseng_throughputs'))
addLosses = True
atmosphere = bu.readAtmosphere(defaultDirs['atmosphere'],
atmosFile='atmos_10_aerosol.dat')
hardware, system = bu.buildHardwareAndSystem(defaultDirs,
addLosses,
atmosphereOverride=atmosphere)
m5_vals = calcM5(hardware,
system,
atmosphere,
title='',
return_t2_values=True)
np.savez('m5_vals.npz', m5_vals=m5_vals)
plt.ylim(0, 1)
plt.xlim(300, 1100)
plt.xlabel('Wavelength (nm)')
plt.ylabel('Fractional Throughput Response')
plt.title('System total response curves %s' %(title))
return m5
if __name__ == '__main__':
# Set the directories for each component.
# Note that this sets the detector to be the 'generic detector' (minimum of each vendor).
throughputDir = os.getenv('LSST_THROUGHPUTS_DEFAULT')
defaultDirs = bu.setDefaultDirs()
# Build the system and hardware throughput curves (without aerosols, with X=1.0).
atmosphere = bu.readAtmosphere(defaultDirs['atmosphere'], atmosFile='atmos_10_aerosol.dat')
hardware = {}
system = {}
for f in ['u', 'g', 'r', 'i', 'z', 'y']:
hardware[f] = Bandpass()
system[f] = Bandpass()
hardware[f].readThroughputList(componentList=['detector.dat', 'filter_'+f+'.dat','lens1.dat', 'lens2.dat', 'lens3.dat', 'm1.dat', 'm2.dat', 'm3.dat'],
rootDir=throughputDir)
system[f].wavelen, system[f].sb = hardware[f].multiplyThroughputs(atmosphere.wavelen, atmosphere.sb)
m5 = calcM5(hardware, system, atmosphere, title='')
plt.show()
fwhm_eff = 1.16 * np.sqrt(fwhm_system**2 + 1.04 * fwhm_atmo**2)
# Translate to FWHMgeom.
fwhm_geom = 0.822 * fwhm_eff + 0.052
return fwhm_eff, fwhm_geom
if __name__ == '__main__':
# Set the directories for each component.
# Note that this sets the detector to be the 'generic detector' (minimum of each vendor).
defaultDirs = bu.setDefaultDirs(rootDir = '..')
# To use a particular vendor, uncomment one of the following lines or edit as necessary.
# defaultDirs['detector'] = 'vendor1'
# defaultDirs['detector'] = 'vendor2'
# Add losses to each component?
addLosses = True
# Build the system and hardware throughput curves (without aerosols, with X=1.0).
#atmosphere = bu.readAtmosphere(defaultDirs['atmosphere'], atmosFile='atmos_10.dat')
#hardware, system = bu.buildHardwareAndSystem(defaultDirs, addLosses, atmosphereOverride=atmosphere)
#m5 = calcM5(hardware, system, atmosphere, title='')
atmosphere = bu.readAtmosphere(defaultDirs['atmosphere'], atmosFile='atmos_10_aerosol.dat')
hardware, system = bu.buildHardwareAndSystem(defaultDirs, addLosses, atmosphereOverride=atmosphere)
m5 = calcM5(hardware, system, atmosphere, title='')
plt.show()
if title == "Vendor combo":
title = ""
plt.title("System total response curves %s" % (title))
plt.savefig("../plots/system+sky" + title + ".png", format="png", dpi=600)
return m5
if __name__ == "__main__":
defaultDirs = bu.setDefaultDirs(rootDir="..")
addLosses = True
hardware = {}
system = {}
m5 = {}
atmosphere = bu.readAtmosphere(defaultDirs["atmosphere"], atmosFile="atmos_10_aerosol.dat")
hardware["combo"], system["combo"] = bu.buildHardwareAndSystem(defaultDirs, atmosphereOverride=atmosphere)
m5["combo"] = calcM5(hardware["combo"], system["combo"], atmosphere, title="combo")
genericDetector = defaultDirs["detector"]
for det in [1, 2]:
defaultDirs["detector"] = os.path.join(genericDetector, "vendor%d" % det)
hardware[det], system[det] = bu.buildHardwareAndSystem(defaultDirs, atmosphereOverride=atmosphere)
m5[det] = calcM5(hardware[det], system[det], atmosphere, title="vendor%d" % (det))
# Show what these look like (print m5 limits on throughput curves)
plt.figure()
for f in filterlist:
for det in [1, 2]:
if det == 1:
linestyle = ":"
spacer = " "
# total_[ugrizy].dat
# hardware_[ugrizy].dat
# Read the data needed from the syseng_throughput repo.
defaultDirs = bu.setDefaultDirs()
addLosses = True
detector = bu.buildDetector(defaultDirs['detector'], addLosses)
filters = bu.buildFilters(defaultDirs['filters'], addLosses)
lens1 = bu.buildLens(defaultDirs['lens1'], addLosses)
lens2 = bu.buildLens(defaultDirs['lens2'], addLosses)
lens3 = bu.buildLens(defaultDirs['lens3'], addLosses)
m1 = bu.buildMirror(defaultDirs['mirror1'], addLosses)
m2 = bu.buildMirror(defaultDirs['mirror2'], addLosses)
m3 = bu.buildMirror(defaultDirs['mirror3'], addLosses)
atmos_std = bu.readAtmosphere(defaultDirs['atmosphere'],
atmosFile='pachonModtranAtm_12_aerosol.dat')
atmos_10 = bu.readAtmosphere(defaultDirs['atmosphere'],
atmosFile='atmos_10_aerosol.dat')
darksky = Sed()
darksky.readSED_flambda(os.path.join(defaultDirs['atmosphere'], 'darksky.dat'))
hardware, system = bu.buildHardwareAndSystem(defaultDirs,
addLosses=addLosses,
atmosphereOverride=atmos_std)
# Write the data to disk.
outDir = 'baseline'
if not os.path.isdir(outDir):
os.makedirs(outDir)
shutil.copy('../README.md', os.path.join(outDir, 'README.md'))
bu.plotBandpasses(atmodict)
return atmosphere_aerosol
if __name__ == '__main__':
parser = argparse.ArgumentParser(
description=
'Add a standard aerosol component to an atmosphere without aerosols')
parser.add_argument('atmosphereFile',
type=str,
default=None,
help='The atmosphere file to add aerosols to.')
parser.add_argument('airmass',
type=float,
default=None,
help='The airmass of the atmosphere file.')
args = parser.parse_args()
atmosDir, atmosFile = os.path.split(args.atmosphereFile)
defaultDirs = bu.setDefaultDirs()
atmosphere = bu.readAtmosphere(atmosDir, atmosFile)
atmosphere_aerosol = addAerosol(atmosphere, args.airmass)
outfile = atmosphere.bandpassname.replace('.dat', '') + '_aerosol.dat'
atmosphere_aerosol.writeThroughput(outfile,
print_header='Added aerosol component')
plt.show()
# total_[ugrizy].dat
# hardware_[ugrizy].dat
# Read the data needed from the syseng_throughput repo.
defaultDirs = bu.setDefaultDirs()
addLosses = True
detector = bu.buildDetector(defaultDirs['detector'], addLosses)
filters = bu.buildFilters(defaultDirs['filters'], addLosses)
lens1 = bu.buildLens(defaultDirs['lens1'], addLosses)
lens2 = bu.buildLens(defaultDirs['lens2'], addLosses)
lens3 = bu.buildLens(defaultDirs['lens3'], addLosses)
m1 = bu.buildMirror(defaultDirs['mirror1'], addLosses)
m2 = bu.buildMirror(defaultDirs['mirror2'], addLosses)
m3 = bu.buildMirror(defaultDirs['mirror3'], addLosses)
atmos_std = bu.readAtmosphere(defaultDirs['atmosphere'], atmosFile='pachonModtranAtm_12_aerosol.dat')
atmos_10 = bu.readAtmosphere(defaultDirs['atmosphere'], atmosFile='atmos_10_aerosol.dat')
darksky = Sed()
darksky.readSED_flambda(os.path.join(defaultDirs['atmosphere'], 'darksky.dat'))
hardware, system = bu.buildHardwareAndSystem(defaultDirs, addLosses=addLosses, atmosphereOverride=atmos_std)
# Write the data to disk.
outDir = 'baseline'
if not os.path.isdir(outDir):
os.makedirs(outDir)
version = subprocess.check_output(['git', 'describe']).strip()
sha1 = subprocess.check_output(["git", "rev-parse", "HEAD"]).strip()
print "version", version, "sha1", sha1
versioninfo = '# Version %s\n'%(version)
versioninfo += '# sha1 %s\n' %(sha1)
tau = tau0 * np.power((wavelen0/atmosphere.wavelen), alpha)
# Generate new atmosphere bandpass with aerosols.
atmosphere_aerosol = Bandpass()
atmosphere_aerosol.setBandpass(wavelen = atmosphere.wavelen,
sb = atmosphere.sb * np.exp(-tau*X))
if plotAtmosphere:
# Plot for a check:
atmodict = {'Original atmosphere':atmosphere,
'With aerosols': atmosphere_aerosol}
bu.plotBandpasses(atmodict)
return atmosphere_aerosol
if __name__=='__main__':
parser = argparse.ArgumentParser(description='Add a standard aerosol component to an atmosphere without aerosols')
parser.add_argument('atmosphereFile', type=str, default=None, help='The atmosphere file to add aerosols to.')
parser.add_argument('airmass', type=float, default=None, help='The airmass of the atmosphere file.')
args = parser.parse_args()
atmosDir, atmosFile = os.path.split(args.atmosphereFile)
defaultDirs = bu.setDefaultDirs()
atmosphere = bu.readAtmosphere(atmosDir, atmosFile)
atmosphere_aerosol = addAerosol(atmosphere, args.airmass)
outfile = atmosphere.bandpassname.replace('.dat', '') + '_aerosol.dat'
atmosphere_aerosol.writeThroughput(outfile, print_header='Added aerosol component')
plt.show()
bu.plotBandpasses(oldfilters, newfig=False, linestyle=':', title='Compare filters')
# Put the individual filter bandpasses straight into 'throughputs', for easier use below.
for f in filters:
throughputs[f] = filters[f]
# Build and compare the mirror curves, for mirrors 1/2/3.
for mirror in ('mirror1', 'mirror2', 'mirror3'):
throughputs[mirror] = bu.buildMirror(defaultDirs[mirror], addLosses)
mfile = ('../intermediateFiles/components/telescope/' + mirror[0] + mirror[-1] +
'Throughput.dat')
comparison.readThroughput(mfile)
plotDict = {'New %s' %(mirror):throughputs[mirror], 'Old %s' %(mirror):comparison}
bu.plotBandpasses(plotDict, title='Compare %s' %(mirror))
# Read the atmosphere file.
throughputs['atmosphere'] = bu.readAtmosphere(defaultDirs['atmosphere'])
# Plot all components.
bu.plotBandpasses(throughputs, title='All components')
# Combine components by hand. Compare to combination returned from bandpassUtils.
core_sb = (throughputs['detector'].sb * throughputs['lens1'].sb * throughputs['lens2'].sb
* throughputs['lens3'].sb * throughputs['mirror1'].sb
* throughputs['mirror2'].sb * throughputs['mirror3'].sb)
hardware = {}
system = {}
for f in filters:
hardware[f] = Bandpass()
system[f] = Bandpass()
wavelen = filters[f].wavelen
hw_sb = core_sb * filters[f].sb
throughputs[f] = filters[f]
# Build and compare the mirror curves, for mirrors 1/2/3.
for mirror in ('mirror1', 'mirror2', 'mirror3'):
throughputs[mirror] = bu.buildMirror(defaultDirs[mirror], addLosses)
mfile = ('../intermediateFiles/components/telescope/' + mirror[0] +
mirror[-1] + 'Throughput.dat')
comparison.readThroughput(mfile)
plotDict = {
'New %s' % (mirror): throughputs[mirror],
'Old %s' % (mirror): comparison
}
bu.plotBandpasses(plotDict, title='Compare %s' % (mirror))
# Read the atmosphere file.
throughputs['atmosphere'] = bu.readAtmosphere(defaultDirs['atmosphere'])
# Plot all components.
bu.plotBandpasses(throughputs, title='All components')
# Combine components by hand. Compare to combination returned from bandpassUtils.
core_sb = (throughputs['detector'].sb * throughputs['lens1'].sb *
throughputs['lens2'].sb * throughputs['lens3'].sb *
throughputs['mirror1'].sb * throughputs['mirror2'].sb *
throughputs['mirror3'].sb)
hardware = {}
system = {}
for f in filters:
hardware[f] = Bandpass()
system[f] = Bandpass()
wavelen = filters[f].wavelen