def init(cls):
if 'GardenPlugin' in pluginmgr.plugins:
species_context_menu.insert(1, add_accession_action)
vernname_context_menu.insert(1, add_accession_action)
mapper_search = search.get_strategy('MapperSearch')
mapper_search.add_meta(('family', 'fam'), Family, ['family'])
SearchView.row_meta[Family].set(children="genera",
infobox=FamilyInfoBox,
context_menu=family_context_menu)
mapper_search.add_meta(('genus', 'gen'), Genus, ['genus'])
SearchView.row_meta[Genus].set(children="species",
infobox=GenusInfoBox,
context_menu=genus_context_menu)
from functools import partial
search.add_strategy(SynonymSearch)
mapper_search.add_meta(
('species', 'sp'), Species,
['sp', 'sp2', 'infrasp1', 'infrasp2', 'infrasp3', 'infrasp4'])
SearchView.row_meta[Species].set(children=partial(
db.natsort, 'accessions'),
infobox=SpeciesInfoBox,
context_menu=species_context_menu)
mapper_search.add_meta(('vernacular', 'vern', 'common'),
VernacularName, ['name'])
SearchView.row_meta[VernacularName].set(
children=partial(db.natsort, 'species.accessions'),
infobox=VernacularNameInfoBox,
context_menu=vernname_context_menu)
mapper_search.add_meta(('geography', 'geo'), Geography, ['name'])
SearchView.row_meta[Geography].set(children=get_species_in_geography)
## now it's the turn of the DefaultView
logger.debug('PlantsPlugin::init, registering splash info box')
DefaultView.infoboxclass = SplashInfoBox
if bauble.gui is not None:
bauble.gui.add_to_insert_menu(FamilyEditor, _('Family'))
bauble.gui.add_to_insert_menu(GenusEditor, _('Genus'))
bauble.gui.add_to_insert_menu(SpeciesEditorMenuItem, _('Species'))
if sys.platform == 'win32':
# TODO: for some reason using the cross as the hybrid
# character doesn't work on windows
Species.hybrid_char = 'x'
def init(cls):
if 'GardenPlugin' in pluginmgr.plugins:
species_context_menu.insert(1, add_accession_action)
vernname_context_menu.insert(1, add_accession_action)
mapper_search = search.get_strategy('MapperSearch')
mapper_search.add_meta(('family', 'fam'), Family, ['family'])
SearchView.row_meta[Family].set(children="genera",
infobox=FamilyInfoBox,
context_menu=family_context_menu)
mapper_search.add_meta(('genus', 'gen'), Genus, ['genus'])
SearchView.row_meta[Genus].set(children="species",
infobox=GenusInfoBox,
context_menu=genus_context_menu)
from functools import partial
search.add_strategy(SynonymSearch)
mapper_search.add_meta(('species', 'sp'), Species,
['sp', 'sp2', 'infrasp1', 'infrasp2',
'infrasp3', 'infrasp4'])
SearchView.row_meta[Species].set(
children=partial(db.natsort, 'accessions'),
infobox=SpeciesInfoBox,
context_menu=species_context_menu)
mapper_search.add_meta(('vernacular', 'vern', 'common'),
VernacularName, ['name'])
SearchView.row_meta[VernacularName].set(
children=partial(db.natsort, 'species.accessions'),
infobox=VernacularNameInfoBox,
context_menu=vernname_context_menu)
mapper_search.add_meta(('geography', 'geo'), Geography, ['name'])
SearchView.row_meta[Geography].set(children=get_species_in_geography)
## now it's the turn of the DefaultView
logger.debug('PlantsPlugin::init, registering splash info box')
DefaultView.infoboxclass = SplashInfoBox
if bauble.gui is not None:
bauble.gui.add_to_insert_menu(FamilyEditor, _('Family'))
bauble.gui.add_to_insert_menu(GenusEditor, _('Genus'))
bauble.gui.add_to_insert_menu(SpeciesEditorMenuItem, _('Species'))
if sys.platform == 'win32':
# TODO: for some reason using the cross as the hybrid
# character doesn't work on windows
Species.hybrid_char = 'x'
def init(cls):
if 'GardenPlugin' in pluginmgr.plugins:
species_context_menu.insert(1, add_accession_action)
vernname_context_menu.insert(1, add_accession_action)
mapper_search = search.get_strategy('MapperSearch')
mapper_search.add_meta(('family', 'fam'), Family, ['family'])
SearchView.view_meta[Family].set(children="genera",
infobox=FamilyInfoBox,
context_menu=family_context_menu,
markup_func=family_markup_func)
mapper_search.add_meta(('genus', 'gen'), Genus, ['genus'])
SearchView.view_meta[Genus].set(children="species",
infobox=GenusInfoBox,
context_menu=genus_context_menu,
markup_func=genus_markup_func)
search.add_strategy(SynonymSearch)
mapper_search.add_meta(('species', 'sp'), Species,
['sp', 'sp2', 'infrasp1', 'infrasp2',
'infrasp3', 'infrasp4'])
SearchView.view_meta[Species].set(children=species_get_kids,
infobox=SpeciesInfoBox,
context_menu=species_context_menu,
markup_func=species_markup_func)
mapper_search.add_meta(('vernacular', 'vern', 'common'),
VernacularName, ['name'])
SearchView.view_meta[VernacularName].set(
children=vernname_get_kids,
infobox=VernacularNameInfoBox,
context_menu=vernname_context_menu,
markup_func=vernname_markup_func)
mapper_search.add_meta(('geography', 'geo'), Geography, ['name'])
SearchView.view_meta[Geography].set(children=get_species_in_geography)
if bauble.gui is not None:
bauble.gui.add_to_insert_menu(FamilyEditor, _('Family'))
bauble.gui.add_to_insert_menu(GenusEditor, _('Genus'))
bauble.gui.add_to_insert_menu(SpeciesEditorMenuItem, _('Species'))
if sys.platform == 'win32':
# TODO: for some reason using the cross as the hybrid
# character doesn't work on windows
Species.hybrid_char = 'x'
def init(cls):
if 'GardenPlugin' in pluginmgr.plugins:
species_context_menu.insert(1, add_accession_action)
vernname_context_menu.insert(1, add_accession_action)
mapper_search = search.get_strategy('MapperSearch')
mapper_search.add_meta(('family', 'fam'), Family, ['family'])
SearchView.view_meta[Family].set(children="genera",
infobox=FamilyInfoBox,
context_menu=family_context_menu,
markup_func=family_markup_func)
mapper_search.add_meta(('genus', 'gen'), Genus, ['genus'])
SearchView.view_meta[Genus].set(children="species",
infobox=GenusInfoBox,
context_menu=genus_context_menu,
markup_func=genus_markup_func)
search.add_strategy(SynonymSearch)
mapper_search.add_meta(
('species', 'sp'), Species,
['sp', 'sp2', 'infrasp1', 'infrasp2', 'infrasp3', 'infrasp4'])
SearchView.view_meta[Species].set(children=species_get_kids,
infobox=SpeciesInfoBox,
context_menu=species_context_menu,
markup_func=species_markup_func)
mapper_search.add_meta(('vernacular', 'vern', 'common'),
VernacularName, ['name'])
SearchView.view_meta[VernacularName].set(
children=vernname_get_kids,
infobox=VernacularNameInfoBox,
context_menu=vernname_context_menu,
markup_func=vernname_markup_func)
mapper_search.add_meta(('geography', 'geo'), Geography, ['name'])
SearchView.view_meta[Geography].set(children=get_species_in_geography)
if bauble.gui is not None:
bauble.gui.add_to_insert_menu(FamilyEditor, _('Family'))
bauble.gui.add_to_insert_menu(GenusEditor, _('Genus'))
bauble.gui.add_to_insert_menu(SpeciesEditorMenuItem, _('Species'))
if sys.platform == 'win32':
# TODO: for some reason using the cross as the hybrid
# character doesn't work on windows
Species.hybrid_char = 'x'
def init(cls):
from bauble.plugins.plants import Species
mapper_search = search.get_strategy('MapperSearch')
from functools import partial
mapper_search.add_meta(('accession', 'acc'), Accession, ['code'])
SearchView.row_meta[Accession].set(
children=partial(db.natsort, "plants"),
infobox=AccessionInfoBox,
context_menu=acc_context_menu)
mapper_search.add_meta(('location', 'loc'), Location, ['name', 'code'])
SearchView.row_meta[Location].set(
children=partial(db.natsort, 'plants'),
infobox=LocationInfoBox,
context_menu=loc_context_menu)
mapper_search.add_meta(('plant', 'plants'), Plant, ['code'])
search.add_strategy(PlantSearch) # special search value strategy
#search.add_strategy(SpeciesSearch) # special search value strategy
SearchView.row_meta[Plant].set(
infobox=PlantInfoBox,
context_menu=plant_context_menu)
mapper_search.add_meta(('contact', 'contacts', 'person', 'org',
'source'), SourceDetail, ['name'])
def sd_kids(detail):
session = object_session(detail)
results = session.query(Accession).join(Source).\
join(SourceDetail).options(eagerload('species')).\
filter(SourceDetail.id == detail.id).all()
return results
SearchView.row_meta[SourceDetail].set(
children=sd_kids,
infobox=SourceDetailInfoBox,
context_menu=source_detail_context_menu)
mapper_search.add_meta(('collection', 'col', 'coll'),
Collection, ['locale'])
coll_kids = lambda coll: sorted(coll.source.accession.plants,
key=utils.natsort_key)
SearchView.row_meta[Collection].set(
children=coll_kids,
infobox=AccessionInfoBox,
context_menu=collection_context_menu)
# done here b/c the Species table is not part of this plugin
SearchView.row_meta[Species].child = "accessions"
if bauble.gui is not None:
bauble.gui.add_to_insert_menu(AccessionEditor, _('Accession'))
bauble.gui.add_to_insert_menu(PlantEditor, _('Plant'))
bauble.gui.add_to_insert_menu(LocationEditor, _('Location'))
bauble.gui.add_to_insert_menu(SourceDetailEditor, _('Contact'))
# if the plant delimiter isn't in the bauble meta then add the default
import bauble.meta as meta
meta.get_default(plant_delimiter_key, default_plant_delimiter)
institution = Institution()
if not institution.name:
start_institution_editor()
def init(cls):
from bauble.plugins.plants import Species
mapper_search = search.get_strategy('MapperSearch')
from functools import partial
mapper_search.add_meta(('accession', 'acc'), Accession, ['code'])
SearchView.row_meta[Accession].set(children=partial(
db.natsort, "plants"),
infobox=AccessionInfoBox,
context_menu=acc_context_menu)
mapper_search.add_meta(('location', 'loc'), Location, ['name', 'code'])
SearchView.row_meta[Location].set(children=partial(
db.natsort, 'plants'),
infobox=LocationInfoBox,
context_menu=loc_context_menu)
mapper_search.add_meta(('plant', 'plants'), Plant, ['code'])
search.add_strategy(PlantSearch) # special search value strategy
#search.add_strategy(SpeciesSearch) # special search value strategy
SearchView.row_meta[Plant].set(infobox=PlantInfoBox,
context_menu=plant_context_menu)
mapper_search.add_meta(
('contact', 'contacts', 'person', 'org', 'source'), SourceDetail,
['name'])
def sd_kids(detail):
session = object_session(detail)
results = session.query(Accession).join(Source).\
join(SourceDetail).options(eagerload('species')).\
filter(SourceDetail.id == detail.id).all()
return results
SearchView.row_meta[SourceDetail].set(
children=sd_kids,
infobox=SourceDetailInfoBox,
context_menu=source_detail_context_menu)
mapper_search.add_meta(('collection', 'col', 'coll'), Collection,
['locale'])
coll_kids = lambda coll: sorted(coll.source.accession.plants,
key=utils.natsort_key)
SearchView.row_meta[Collection].set(
children=coll_kids,
infobox=AccessionInfoBox,
context_menu=collection_context_menu)
# done here b/c the Species table is not part of this plugin
SearchView.row_meta[Species].child = "accessions"
if bauble.gui is not None:
bauble.gui.add_to_insert_menu(AccessionEditor, _('Accession'))
bauble.gui.add_to_insert_menu(PlantEditor, _('Plant'))
bauble.gui.add_to_insert_menu(LocationEditor, _('Location'))
#bauble.gui.add_to_insert_menu(ContactEditor, _('Contact'))
# if the plant delimiter isn't in the bauble meta then add the default
import bauble.meta as meta
meta.get_default(plant_delimiter_key, default_plant_delimiter)
institution = Institution()
if not institution.name:
start_institution_editor()
