def _pi_results(view_slug, startdate, enddate, clinic_id):
# keys is a list of start/end key dicts, for all of them,
# get the results and chain into one big single list
return itertools.chain(*[get_db().view\
(const.get_view_name(view_slug), group=True,
group_level=4, **keys).all() \
for keys in _get_keys(startdate, enddate, clinic_id)])
def testHivPi(self):
folder_name = os.path.join(os.path.dirname(__file__), "testpatients", "hiv_pitest")
patient = export.import_patient_json_file(os.path.join(folder_name, "patient.json"))
# first visit has a recent test so it doesn't count to denominator
updated_patient, form_doc1 = export.add_form_file_to_patient(patient.get_id, os.path.join(folder_name, "001_general.xml"))
[res] = get_db().view(const.get_view_name("adult_pi"), group=True, group_level=4,
key=[2011,4, "9999999", "hiv_test"]).all()
num, denom = res["value"]
self.assertEqual(0, num)
self.assertEqual(0, denom)
updated_patient, form_doc2 = export.add_form_file_to_patient(patient.get_id, os.path.join(folder_name, "002_general.xml"))
# second visit has no recent test so it counts
[res] = get_db().view(const.get_view_name("adult_pi"), group=True, group_level=4,
key=[2011,5, "9999999", "hiv_test"]).all()
num, denom = res["value"]
self.assertEqual(0, num)
self.assertEqual(1, denom)
def pi_details(request):
year = int(request.GET["year"])
month = int(request.GET["month"])
clinic = request.GET["clinic"]
report_slug = request.GET["report"]
col_slug = request.GET["col"]
results = get_db().view(const.get_view_name(report_slug), reduce=False,
key=[year, month -1, clinic, col_slug], include_docs=True)
forms = []
for row in results:
num, denom = row["value"]
# only count forms for now, and make sure they have a patient id
# and contributed to the report denominator
if row["doc"]["doc_type"] == "CXFormInstance" and denom > 0:
form = CXFormInstance.wrap(row["doc"])
try:
form.patient_id = form.xpath("case/patient_id")
form.bhoma_patient_id = CPatient.get(form.patient_id).formatted_id
except ResourceNotFound:
form.patient = form.patient_id = form.bhoma_patient_id = None
form.num = num
form.denom = denom
form.good = num == denom
forms.append(form)
elif row["doc"]["doc_type"] == "PregnancyReportRecord" and denom > 0:
# for the pregnancy PI force the aggregated pregnancy docs
# to look like forms
preg = PregnancyReportRecord.wrap(row["doc"])
try:
preg.bhoma_patient_id = CPatient.get(preg.patient_id).formatted_id
except ResourceNotFound:
form.patient = form.patient_id = form.bhoma_patient_id = None
preg.num = num
preg.denom = denom
preg.good = num == denom
preg.encounter_date = preg.first_visit_date
forms.append(preg)
title = "PI Details - %s: %s (%s, %s)" % (const.get_name(report_slug),
const.get_display_name(report_slug, col_slug),
datetime(year, month, 1).strftime("%B %Y"),
clinic_display_name(clinic))
return render_to_response(request, "reports/pi_details.html",
{"report": {"name": title},
"forms": forms})
def disease_details(request):
year = int(request.GET["year"])
month = int(request.GET["month"])
clinic = request.GET["clinic"]
report_slug = request.GET["report"]
col_slug = request.GET["col"]
results = get_db().view(const.get_view_name(report_slug), reduce=True,
startkey=[year, month -1, clinic, col_slug],
endkey=[year, month -1, clinic, col_slug, {}],
group=True, group_level=5)
results_dict = dict([(row["key"][4], row["value"]) for row in results])
title = "Clinic: %s, Category: %s, %s" % \
(clinic_display_name(clinic),
const.get_display_name(report_slug, col_slug),
datetime(year, month, 1).strftime("%B, %Y"))
return render_to_response(request, "reports/disease_details.html",
{"report": {"name": title},
"values": results_dict})
