def OnPharmDiff(self, e):
timestamp = mainQuery.getTime()
self.dirname = ''
self.filelist = []
dlg = wx.FileDialog(self, "Choose a file", "", "", "*.*", wx.FD_MULTIPLE)
if dlg.ShowModal() == wx.ID_OK:
self.filelist = dlg.GetPaths()
self.dirname = dlg.GetDirectory()
if os.path.isfile(self.filelist[0]) and os.path.isfile(self.filelist[1]):
dlg2 = wx.MessageDialog(self, "Proceed with file differentiation?\n\nFiles will be written to:\n"+str(self.dirname)+r"\pharmDiffResults"+timestamp+".csv", "Pharm Differential Analysis", wx.YES_NO)
if dlg2.ShowModal() == wx.ID_YES:
drugPharmAssoc.pharmDiff(self.filelist[0], self.filelist[1], str(self.dirname)+r"\pharmDiffResults"+timestamp+".csv")
dlg2.Destroy()
dlg.Destroy()
def OnGetPharm(self, e):
self.downdir = '\\pharmacologic_class_indexing_spl_files'+mainQuery.getTime()
dlg = wx.DirDialog(self, "Choose a directory", "", wx.DD_DIR_MUST_EXIST)
if dlg.ShowModal() == wx.ID_OK:
self.downdir = dlg.GetPath()+self.downdir
if os.path.isfile(self.downdir+".zip") == True:
if os.path.isdir(self.downdir) == True:
return()
else:
if os.path.isdir(r"c:\cygwin64") == True or os.path.isdir(r"C:\cygwin") == True:
dlg4 = wx.MessageDialog(self, "Download Complete\n\nWould you like to extract the files using cygwin? (Windows only)", "Download Status", wx.YES_NO)
if dlg4.ShowModal() == wx.ID_YES:
drugPharmAssoc.extractPharmData(self.downdir+".zip")
dlg4.Destroy()
return()
else:
dlg4.Destroy()
return()
else:
dlg4 = wx.MessageDialog(self, "Download Complete", "Download Status", wx.OK)
dlg4.ShowModal()
dlg4.Destroy()
return()
dlg2 = wx.MessageDialog(self, "Click OK to download data to "+self.downdir+".zip"+"\n\nIt may take a few minutes for the file to appear", "Download In Progress", wx.OK | wx.CANCEL)
if dlg2.ShowModal() == wx.ID_OK:
print('Beginning download of pharmocologic index files...\n\n')
drugPharmAssoc.getPharmData(self.downdir+".zip")
print('Download complete\n\n')
dlg2.Destroy()
if os.path.isdir(r"c:\cygwin64") == True or os.path.isdir(r"C:\cygwin") == True:
dlg3 = wx.MessageDialog(self, "Download Complete\n\nWould you like to extract the files using cygwin? (Windows only)", "Download Status", wx.YES_NO)
if os.path.isfile(self.downdir+".zip") == True:
if dlg3.ShowModal() == wx.ID_YES:
drugPharmAssoc.extractPharmData(self.downdir+".zip")
dlg3.Destroy()
else:
dlg3 = wx.MessageDialog(self, "Download Complete", "Download Status", wx.OK)
dlg3.ShowModal()
dlg3.Destroy()
dlg.Destroy()
