Python PandasPDB._read_pdb Examples

Example #1

File: test_read_pdb.py Project: smopart/biopandas

def test__read_pdb_gz():
    """Test public _read_pdb with gzip files"""
    ppdb = PandasPDB()
    txt = ppdb._read_pdb(TESTDATA_FILENAME_GZ)
    assert txt == three_eiy

Example #2

File: test_read_pdb.py Project: rasbt/biopandas

def test__read_pdb_gz():
    """Test public _read_pdb with gzip files"""
    ppdb = PandasPDB()
    txt = ppdb._read_pdb(TESTDATA_FILENAME_GZ)
    assert txt == three_eiy

Example #3

File: test_read_pdb.py Project: smopart/biopandas

def test__read_pdb():
    """Test private _read_pdb"""
    ppdb = PandasPDB()
    txt = ppdb._read_pdb(TESTDATA_FILENAME)
    print(txt)
    assert txt == three_eiy

Example #4

File: test_read_pdb.py Project: rasbt/biopandas

def test__read_pdb():
    """Test private _read_pdb"""
    ppdb = PandasPDB()
    txt = ppdb._read_pdb(TESTDATA_FILENAME)
    print(txt)
    assert txt == three_eiy