Python GeneProf.get_targets_tf Examples

Example #1

File: test_geneprof.py Project: schryer/bioservices

def test_gettargets():
    g = GeneProf(verbose=False)
    g.get_targets_tf("mouse", "9885")
    g.get_targets_tf("human", "36958", include_unbound=True)
    g.get_targets_tf("mouse", "14899", ats="C_NAME,C_ENSG")
    g.get_targets_tf("human", "36958", frmt="rdata")
    g.get_targets_by_experiment_sample("mouse", "541")
    g.get_targets_by_experiment_sample("human", "784", include_unbound=True)
    g.get_targets_by_experiment_sample("mouse", "541", ats="C_NAME,C_ENSG")
    g.get_targets_by_experiment_sample("human", "784", frmt="rdata")

Example #2

File: test_geneprof.py Project: cxhernandez/bioservices

def test_gettargets():
    g = GeneProf(verbose=False)
    g.get_targets_tf("mouse", "9885")
    g.get_targets_tf("human", "36958", include_unbound=True)
    g.get_targets_tf("mouse", "14899", ats="C_NAME,C_ENSG")
    g.get_targets_tf("human", "36958", frmt="rdata")
    g.get_targets_by_experiment_sample("mouse", "541")
    g.get_targets_by_experiment_sample("human", "784", include_unbound=True)
    g.get_targets_by_experiment_sample("mouse", "541", ats="C_NAME,C_ENSG")
    g.get_targets_by_experiment_sample("human", "784", frmt="rdata")