Example #1
0
def decode_bittools(bseq):
    """ Decompress Lempel-Ziv-Welch encoded sequence.

    Parameters
    ----------
    bseq : numpy.ndarray

    Returns
    -------
    seq : str

    See also
    --------
    encode_bittools
    """
    init_invtable = [(code, chr(code)) for code in range(256)]
    table = [chr(code) for code in range(256)] + ['CODECLEAR', 'CODEEOI']
    table_append = table.append
    table_len = table.__len__

    bits = 9
    max_code2 = (1 << bits) - 2
    i = 0
    seq = []
    seq_append = seq.append

    while True:
        code, i = getword(bseq, i, bits)
        if code == CODEEOI:
            break
        elif code == CODECLEAR:
            del table[CODESTART:]
            bits = 9
            max_code2 = (1 << bits) - 2
            code, i = getword(bseq, i, bits)
            old_str = table[code]
            seq_append(old_str)
            old_code = code
        else:
            l = table_len()
            if code < l:
                s = table[code]
                table_append(old_str + s[0])
                old_str = s
            else:
                old_str = old_str + old_str[0]
                table_append(old_str)

            seq_append(old_str)
            old_code = code

            if l == max_code2:
                bits += 1
                max_code2 = (1 << bits) - 2
    return ''.join(seq)
Example #2
0
def decode_bittools(bseq):
    """ Decompress Lempel-Ziv-Welch encoded sequence.

    Parameters
    ----------
    bseq : numpy.ndarray

    Returns
    -------
    seq : str

    See also
    --------
    encode_bittools
    """
    init_invtable = [(code, chr(code)) for code in range (256)]
    table = [chr(code) for code in range(256)] + ['CODECLEAR', 'CODEEOI']
    table_append = table.append
    table_len = table.__len__

    bits = 9
    max_code2 = (1<<bits) - 2
    i = 0
    seq = []
    seq_append = seq.append

    while True:
        code, i = getword(bseq, i, bits)
        if code==CODEEOI:
            break
        elif code==CODECLEAR:
            del table[CODESTART:]
            bits = 9
            max_code2 = (1<<bits) - 2
            code, i = getword(bseq, i, bits)
            old_str = table[code]
            seq_append(old_str)
            old_code = code
        else:
            l = table_len()
            if code < l:
                s = table[code]
                table_append(old_str + s[0])
                old_str = s
            else:
                old_str = old_str + old_str[0]
                table_append(old_str)

            seq_append(old_str)
            old_code = code

            if l==max_code2:
                bits += 1
                max_code2 = (1<<bits) - 2
    return ''.join(seq)
Example #3
0
def test_wordbits ():
    for width in range (1,64+1):
        arr = numpy.array([131,17,235], dtype=numpy.int64)
        arr2 = numpy.zeros((1+width//8), dtype=arr.dtype)
        bstr = tobinary(arr)
        word, next = bittools.getword(arr, 0, width)
        if width > 7:
            assert word==arr[0],repr((word, arr[0], bstr))
        bittools.setword (arr2, 0, width, word)
        assert bittools.getword (arr2, 0, width)[0]==word
        assert tobinary(arr2)[:width] == bstr[:width],repr((tobinary(arr2)[:width], bstr[:width]))
Example #4
0
def test_wordbits():
    for width in range(1, 64 + 1):
        arr = numpy.array([131, 17, 235], dtype=numpy.int64)
        arr2 = numpy.zeros((1 + width // 8), dtype=arr.dtype)
        bstr = tobinary(arr)
        word, next = bittools.getword(arr, 0, width)
        if width > 7:
            assert word == arr[0], ` word, arr[0], bstr `
        bittools.setword(arr2, 0, width, word)
        assert bittools.getword(arr2, 0, width)[0] == word
        assert tobinary(arr2)[:width] == bstr[:width], ` tobinary(
            arr2)[:width], bstr[:width] `
Example #5
0
def test_setgetword():
    for dtype in [numpy.ubyte, numpy.int32, numpy.float64]:
        arr = numpy.array(range(-256, 256), dtype=dtype)
        arr2 = numpy.zeros(arr.shape, dtype=arr.dtype)
        for i in range(arr.nbytes):
            word, next = bittools.getword(arr, i * 8, 8)
            bittools.setword(arr2, i * 8, 8, word)
        assert (arr == arr2).all(), ` arr, arr2 `
    print 'ok'
Example #6
0
def test_setgetword():
    for dtype in [numpy.ubyte, numpy.int32, numpy.float64]:
        arr = numpy.array(list(range(-256,256)), dtype=dtype)
        arr2 = numpy.zeros(arr.shape, dtype=arr.dtype)
        for i in range (arr.nbytes):
            word, next = bittools.getword (arr,i*8,8)
            bittools.setword (arr2,i*8,8,word)
        assert (arr==arr2).all(),repr((arr,arr2))
    print('ok')