def __init__(self, filterbank, targetvar, *args, **kwds):
self.targetvar = targetvar
self.filterbank = filterbank
self.buffer = None
filterbank.buffer_init()
# Sanitize the clock - does it have the right dt value?
if 'clock' in kwds:
if int(1/kwds['clock'].dt)!=int(filterbank.samplerate):
raise ValueError('Clock should have 1/dt=samplerate')
kwds['clock'] = Clock(dt=float(kwds['clock'].dt)*second)
else:
kwds['clock'] = Clock(dt=1*second/float(filterbank.samplerate))
buffersize = kwds.pop('buffersize', 32)
if not isinstance(buffersize, int):
buffersize = int(buffersize*self.samplerate)
self.buffersize = buffersize
self.buffer_pointer = buffersize
self.buffer_start = -buffersize
NeuronGroup.__init__(self, filterbank.nchannels, *args, **kwds)
@network_operation(clock=self.clock, when='start')
def apply_filterbank_output():
if self.buffer_pointer>=self.buffersize:
self.buffer_pointer = 0
self.buffer_start += self.buffersize
self.buffer = self.filterbank.buffer_fetch(self.buffer_start, self.buffer_start+self.buffersize)
setattr(self, targetvar, self.buffer[self.buffer_pointer, :])
self.buffer_pointer += 1
self.contained_objects.append(apply_filterbank_output)
def __init__(self,
dt=None,
clock=None,
when='start',
order=0,
name='brianobject*'):
if dt is not None and clock is not None:
raise ValueError(
'Can only specify either a dt or a clock, not both.')
if not isinstance(when, basestring):
# Give some helpful error messages for users coming from the alpha
# version
if isinstance(when, Clock):
raise TypeError(("Do not use the 'when' argument for "
"specifying a clock, either provide a "
"timestep for the 'dt' argument or a Clock "
"object for 'clock'."))
if isinstance(when, tuple):
raise TypeError("Use the separate keyword arguments, 'dt' (or "
"'clock'), 'when', and 'order' instead of "
"providing a tuple for 'when'. Only use the "
"'when' argument for the scheduling slot.")
# General error
raise TypeError("The 'when' argument has to be a string "
"specifying the scheduling slot (e.g. 'start').")
Nameable.__init__(self, name)
#: The clock used for simulating this object
self._clock = clock
if clock is None:
if dt is not None:
self._clock = Clock(dt=dt, name=self.name + '_clock*')
else:
self._clock = defaultclock
#: Used to remember the `Network` in which this object has been included
#: before, to raise an error if it is included in a new `Network`
self._network = None
#: The ID string determining when the object should be updated in `Network.run`.
self.when = when
#: The order in which objects with the same clock and ``when`` should be updated
self.order = order
self._dependencies = set()
self._contained_objects = []
self._code_objects = []
self._active = True
#: The scope key is used to determine which objects are collected by magic
self._scope_key = self._scope_current_key
logger.debug("Created BrianObject with name {self.name}, "
"clock={self._clock}, "
"when={self.when}, order={self.order}".format(self=self))
def activate(self, build_on_run, **kwargs):
'''
Called when this device is set as the current device.
'''
if self.defaultclock is None:
self.defaultclock = Clock(dt=0.1 * ms, name='defaultclock')
self._set_maximum_run_time(None)
self.build_on_run = build_on_run
self.build_options = dict(kwargs)
def activate(self, build_on_run=True, **kwargs):
'''
Called when this device is set as the current device.
'''
from brian2.core.clocks import Clock # avoid import issues
if self.defaultclock is None:
self.defaultclock = Clock(dt=0.1*ms, name='defaultclock')
self._set_maximum_run_time(None)
self.build_on_run = build_on_run
self.build_options = dict(kwargs)
def __init__(self,
dt=None,
clock=None,
when='start',
order=0,
name='brianobject*'):
# Setup traceback information for this object
creation_stack = []
bases = []
for modulename in ['brian2']:
if modulename in sys.modules:
base, _ = os.path.split(sys.modules[modulename].__file__)
bases.append(base)
for fname, linenum, funcname, line in traceback.extract_stack():
if all(base not in fname for base in bases):
s = ' File "{fname}", line {linenum}, in {funcname}\n {line}'.format(
fname=fname, linenum=linenum, funcname=funcname, line=line)
creation_stack.append(s)
creation_stack = [''] + creation_stack
#: A string indicating where this object was created (traceback with any parts of Brian code removed)
self._creation_stack = (
'Object was created here (most recent call only, full details in '
'debug log):\n' + creation_stack[-1])
self._full_creation_stack = 'Object was created here:\n' + '\n'.join(
creation_stack)
if dt is not None and clock is not None:
raise ValueError(
'Can only specify either a dt or a clock, not both.')
if not isinstance(when, basestring):
from brian2.core.clocks import Clock
# Give some helpful error messages for users coming from the alpha
# version
if isinstance(when, Clock):
raise TypeError(("Do not use the 'when' argument for "
"specifying a clock, either provide a "
"timestep for the 'dt' argument or a Clock "
"object for 'clock'."))
if isinstance(when, tuple):
raise TypeError("Use the separate keyword arguments, 'dt' (or "
"'clock'), 'when', and 'order' instead of "
"providing a tuple for 'when'. Only use the "
"'when' argument for the scheduling slot.")
# General error
raise TypeError("The 'when' argument has to be a string "
"specifying the scheduling slot (e.g. 'start').")
Nameable.__init__(self, name)
#: The clock used for simulating this object
self._clock = clock
if clock is None:
from brian2.core.clocks import Clock, defaultclock
if dt is not None:
self._clock = Clock(dt=dt, name=self.name + '_clock*')
else:
self._clock = defaultclock
if getattr(self._clock, '_is_proxy', False):
from brian2.devices.device import get_device
self._clock = get_device().defaultclock
#: Used to remember the `Network` in which this object has been included
#: before, to raise an error if it is included in a new `Network`
self._network = None
#: The ID string determining when the object should be updated in `Network.run`.
self.when = when
#: The order in which objects with the same clock and ``when`` should be updated
self.order = order
self._dependencies = set()
self._contained_objects = []
self._code_objects = []
self._active = True
#: The scope key is used to determine which objects are collected by magic
self._scope_key = self._scope_current_key
logger.diagnostic(
"Created BrianObject with name {self.name}, "
"clock={self._clock}, "
"when={self.when}, order={self.order}".format(self=self))