Example #1
0
def test_bloom():
    hashes = [os.urandom(20) for i in range(100)]

    class Idx:
        pass

    ix = Idx()
    ix.name = 'dummy.idx'
    ix.shatable = ''.join(hashes)
    for k in (4, 5):
        b = bloom.create('pybuptest.bloom', expected=100, k=k)
        b.add_idx(ix)
        WVPASSLT(b.pfalse_positive(), .1)
        b.close()
        b = bloom.ShaBloom('pybuptest.bloom')
        all_present = True
        for h in hashes:
            all_present &= b.exists(h)
        WVPASS(all_present)
        false_positives = 0
        for h in [os.urandom(20) for i in range(1000)]:
            if b.exists(h):
                false_positives += 1
        WVPASSLT(false_positives, 5)
        os.unlink('pybuptest.bloom')

    tf = tempfile.TemporaryFile()
    b = bloom.create('bup.bloom', f=tf, expected=100)
    WVPASSEQ(b.rwfile, tf)
    WVPASSEQ(b.k, 5)
    tf = tempfile.TemporaryFile()
    b = bloom.create('bup.bloom', f=tf, expected=2**28, delaywrite=False)
    WVPASSEQ(b.k, 4)
Example #2
0
File: bloom.py Project: jmberg/bup
def ruin_bloom(bloomfilename):
    rbloomfilename = git.repo_rel(bloomfilename)
    if not os.path.exists(bloomfilename):
        log(path_msg(bloomfilename) + '\n')
        add_error('bloom: %s not found to ruin\n' % path_msg(rbloomfilename))
        return
    b = bloom.ShaBloom(bloomfilename, readwrite=True, expected=1)
    b.map[16:16 + 2**b.bits] = b'\0' * 2**b.bits
Example #3
0
def ruin_bloom(bloomfilename):
    rbloomfilename = git.repo_rel(bloomfilename)
    if not os.path.exists(bloomfilename):
        log("%s\n" % bloomfilename)
        add_error("bloom: %s not found to ruin\n" % rbloomfilename)
        return
    b = bloom.ShaBloom(bloomfilename, readwrite=True, expected=1)
    b.map[16:16+2**b.bits] = '\0' * 2**b.bits
Example #4
0
def test_bloom():
    with no_lingering_errors():
        with test_tempdir('bup-tbloom-') as tmpdir:
            hashes = [os.urandom(20) for i in range(100)]

            class Idx:
                pass

            ix = Idx()
            ix.name = 'dummy.idx'
            ix.shatable = ''.join(hashes)
            for k in (4, 5):
                b = bloom.create(tmpdir + '/pybuptest.bloom',
                                 expected=100,
                                 k=k)
                b.add_idx(ix)
                WVPASSLT(b.pfalse_positive(), .1)
                b.close()
                b = bloom.ShaBloom(tmpdir + '/pybuptest.bloom')
                all_present = True
                for h in hashes:
                    all_present &= b.exists(h)
                WVPASS(all_present)
                false_positives = 0
                for h in [os.urandom(20) for i in range(1000)]:
                    if b.exists(h):
                        false_positives += 1
                WVPASSLT(false_positives, 5)
                os.unlink(tmpdir + '/pybuptest.bloom')

            tf = tempfile.TemporaryFile(dir=tmpdir)
            b = bloom.create('bup.bloom', f=tf, expected=100)
            WVPASSEQ(b.rwfile, tf)
            WVPASSEQ(b.k, 5)

            # Test large (~1GiB) filter.  This may fail on s390 (31-bit
            # architecture), and anywhere else where the address space is
            # sufficiently limited.
            tf = tempfile.TemporaryFile(dir=tmpdir)
            skip_test = False
            try:
                b = bloom.create('bup.bloom',
                                 f=tf,
                                 expected=2**28,
                                 delaywrite=False)
            except EnvironmentError as ex:
                (ptr_width, linkage) = platform.architecture()
                if ptr_width == '32bit' and ex.errno == errno.ENOMEM:
                    WVMSG(
                        'skipping large bloom filter test (mmap probably failed) '
                        + str(ex))
                    skip_test = True
                else:
                    raise
            if not skip_test:
                WVPASSEQ(b.k, 4)
Example #5
0
def test_bloom(tmpdir):
    hashes = [os.urandom(20) for i in range(100)]

    class Idx:
        pass

    ix = Idx()
    ix.name = b'dummy.idx'
    ix.shatable = b''.join(hashes)
    for k in (4, 5):
        with bloom.create(tmpdir + b'/pybuptest.bloom', expected=100,
                          k=k) as b:
            b.add_idx(ix)
            assert b.pfalse_positive() < .1
        with bloom.ShaBloom(tmpdir + b'/pybuptest.bloom') as b:
            all_present = True
            for h in hashes:
                all_present &= (b.exists(h) or False)
            assert all_present
            false_positives = 0
            for h in [os.urandom(20) for i in range(1000)]:
                if b.exists(h):
                    false_positives += 1
            assert false_positives < 5
        os.unlink(tmpdir + b'/pybuptest.bloom')

    tf = tempfile.TemporaryFile(dir=tmpdir)
    with bloom.create(b'bup.bloom', f=tf, expected=100) as b:
        assert b.file == tf
        assert b.k == 5

    # Test large (~1GiB) filter.  This may fail on s390 (31-bit
    # architecture), and anywhere else where the address space is
    # sufficiently limited.
    tf = tempfile.TemporaryFile(dir=tmpdir)
    skip_test = False
    try:
        with bloom.create(b'bup.bloom', f=tf, expected=2**28,
                          delaywrite=False) as b:
            assert b.k == 4
    except EnvironmentError as ex:
        (ptr_width, linkage) = platform.architecture()
        if ptr_width == '32bit' and ex.errno == errno.ENOMEM:
            logging.getLogger().info(
                'skipping large bloom filter test (mmap probably failed) ' +
                str(ex))
        else:
            raise
Example #6
0
File: bloom.py Project: jmberg/bup
def check_bloom(path, bloomfilename, idx):
    rbloomfilename = git.repo_rel(bloomfilename)
    ridx = git.repo_rel(idx)
    if not os.path.exists(bloomfilename):
        log('bloom: %s: does not exist.\n' % path_msg(rbloomfilename))
        return
    b = bloom.ShaBloom(bloomfilename)
    if not b.valid():
        add_error('bloom: %r is invalid.\n' % path_msg(rbloomfilename))
        return
    base = os.path.basename(idx)
    if base not in b.idxnames:
        log('bloom: %s does not contain the idx.\n' % path_msg(rbloomfilename))
        return
    if base == idx:
        idx = os.path.join(path, idx)
    log('bloom: bloom file: %s\n' % path_msg(rbloomfilename))
    log('bloom:   checking %s\n' % path_msg(ridx))
    for objsha in git.open_idx(idx):
        if not b.exists(objsha):
            add_error('bloom: ERROR: object %s missing' % hexstr(objsha))
Example #7
0
File: git.py Project: zzmjohn/bup
    def refresh(self, skip_midx=False):
        """Refresh the index list.
        This method verifies if .midx files were superseded (e.g. all of its
        contents are in another, bigger .midx file) and removes the superseded
        files.

        If skip_midx is True, all work on .midx files will be skipped and .midx
        files will be removed from the list.

        The instance variable 'ignore_midx' can force this function to
        always act as if skip_midx was True.
        """
        if self.bloom is not None:
            self.bloom.close()
        self.bloom = None  # Always reopen the bloom as it may have been relaced
        self.do_bloom = False
        skip_midx = skip_midx or self.ignore_midx
        d = dict((p.name, p) for p in self.packs
                 if not skip_midx or not isinstance(p, midx.PackMidx))
        if os.path.exists(self.dir):
            if not skip_midx:
                midxl = []
                midxes = set(glob.glob(os.path.join(self.dir, b'*.midx')))
                # remove any *.midx files from our list that no longer exist
                for ix in list(d.values()):
                    if not isinstance(ix, midx.PackMidx):
                        continue
                    if ix.name in midxes:
                        continue
                    # remove the midx
                    del d[ix.name]
                    ix.close()
                    self.packs.remove(ix)
                for ix in self.packs:
                    if isinstance(ix, midx.PackMidx):
                        for name in ix.idxnames:
                            d[os.path.join(self.dir, name)] = ix
                for full in midxes:
                    if not d.get(full):
                        mx = midx.PackMidx(full)
                        (mxd, mxf) = os.path.split(mx.name)
                        broken = False
                        for n in mx.idxnames:
                            if not os.path.exists(os.path.join(mxd, n)):
                                log(('warning: index %s missing\n'
                                     '  used by %s\n') %
                                    (path_msg(n), path_msg(mxf)))
                                broken = True
                        if broken:
                            mx.close()
                            del mx
                            unlink(full)
                        else:
                            midxl.append(mx)
                midxl.sort(
                    key=lambda ix: (-len(ix), -xstat.stat(ix.name).st_mtime))
                for ix in midxl:
                    any_needed = False
                    for sub in ix.idxnames:
                        found = d.get(os.path.join(self.dir, sub))
                        if not found or isinstance(found, PackIdx):
                            # doesn't exist, or exists but not in a midx
                            any_needed = True
                            break
                    if any_needed:
                        d[ix.name] = ix
                        for name in ix.idxnames:
                            d[os.path.join(self.dir, name)] = ix
                    elif not ix.force_keep:
                        debug1('midx: removing redundant: %s\n' %
                               path_msg(os.path.basename(ix.name)))
                        ix.close()
                        unlink(ix.name)
            for full in glob.glob(os.path.join(self.dir, b'*.idx')):
                if not d.get(full):
                    try:
                        ix = open_idx(full)
                    except GitError as e:
                        add_error(e)
                        continue
                    d[full] = ix
            bfull = os.path.join(self.dir, b'bup.bloom')
            if self.bloom is None and os.path.exists(bfull):
                self.bloom = bloom.ShaBloom(bfull)
            self.packs = list(set(d.values()))
            self.packs.sort(reverse=True, key=lambda x: len(x))
            if self.bloom and self.bloom.valid() and len(
                    self.bloom) >= len(self):
                self.do_bloom = True
            else:
                self.bloom = None
        debug1('PackIdxList: using %d index%s.\n' %
               (len(self.packs), len(self.packs) != 1 and 'es' or ''))
Example #8
0
File: bloom.py Project: jmberg/bup
def do_bloom(path, outfilename, k, force):
    global _first
    assert k in (None, 4, 5)
    b = None
    if os.path.exists(outfilename) and not force:
        b = bloom.ShaBloom(outfilename)
        if not b.valid():
            debug1("bloom: Existing invalid bloom found, regenerating.\n")
            b = None

    add = []
    rest = []
    add_count = 0
    rest_count = 0
    for i, name in enumerate(glob.glob(b'%s/*.idx' % path)):
        progress('bloom: counting: %d\r' % i)
        ix = git.open_idx(name)
        ixbase = os.path.basename(name)
        if b and (ixbase in b.idxnames):
            rest.append(name)
            rest_count += len(ix)
        else:
            add.append(name)
            add_count += len(ix)

    if not add:
        debug1("bloom: nothing to do.\n")
        return

    if b:
        if len(b) != rest_count:
            debug1("bloom: size %d != idx total %d, regenerating\n" %
                   (len(b), rest_count))
            b = None
        elif k is not None and k != b.k:
            debug1("bloom: new k %d != existing k %d, regenerating\n" %
                   (k, b.k))
            b = None
        elif (b.bits < bloom.MAX_BLOOM_BITS[b.k]
              and b.pfalse_positive(add_count) > bloom.MAX_PFALSE_POSITIVE):
            debug1("bloom: regenerating: adding %d entries gives "
                   "%.2f%% false positives.\n" %
                   (add_count, b.pfalse_positive(add_count)))
            b = None
        else:
            b = bloom.ShaBloom(outfilename, readwrite=True, expected=add_count)
    if not b:  # Need all idxs to build from scratch
        add += rest
        add_count += rest_count
    del rest
    del rest_count

    msg = b is None and 'creating from' or 'adding'
    if not _first: _first = path
    dirprefix = (_first != path) and git.repo_rel(path) + b': ' or b''
    progress('bloom: %s%s %d file%s (%d object%s).\r' %
             (path_msg(dirprefix), msg, len(add), len(add) != 1 and 's'
              or '', add_count, add_count != 1 and 's' or ''))

    tfname = None
    if b is None:
        tfname = os.path.join(path, b'bup.tmp.bloom')
        b = bloom.create(tfname, expected=add_count, k=k)
    count = 0
    icount = 0
    for name in add:
        ix = git.open_idx(name)
        qprogress('bloom: writing %.2f%% (%d/%d objects)\r' %
                  (icount * 100.0 / add_count, icount, add_count))
        b.add_idx(ix)
        count += 1
        icount += len(ix)

    # Currently, there's an open file object for tfname inside b.
    # Make sure it's closed before rename.
    b.close()

    if tfname:
        os.rename(tfname, outfilename)
Example #9
0
def do_bloom(path, outfilename):
    global _first
    b = None
    if os.path.exists(outfilename) and not opt.force:
        b = bloom.ShaBloom(outfilename)
        if not b.valid():
            debug1("bloom: Existing invalid bloom found, regenerating.\n")
            b = None

    add = []
    rest = []
    add_count = 0
    rest_count = 0
    for i, name in enumerate(glob.glob('%s/*.idx' % path)):
        progress('bloom: counting: %d\r' % i)
        ix = git.open_idx(name)
        ixbase = os.path.basename(name)
        if b and (ixbase in b.idxnames):
            rest.append(name)
            rest_count += len(ix)
        else:
            add.append(name)
            add_count += len(ix)
    total = add_count + rest_count

    if not add:
        debug1("bloom: nothing to do.\n")
        return

    if b:
        if len(b) != rest_count:
            debug1("bloom: size %d != idx total %d, regenerating\n" %
                   (len(b), rest_count))
            b = None
        elif (b.bits < bloom.MAX_BLOOM_BITS
              and b.pfalse_positive(add_count) > bloom.MAX_PFALSE_POSITIVE):
            debug1("bloom: regenerating: adding %d entries gives "
                   "%.2f%% false positives.\n" %
                   (add_count, b.pfalse_positive(add_count)))
            b = None
        else:
            b = bloom.ShaBloom(outfilename, readwrite=True, expected=add_count)
    if not b:  # Need all idxs to build from scratch
        add += rest
        add_count += rest_count
    del rest
    del rest_count

    msg = b is None and 'creating from' or 'adding'
    if not _first: _first = path
    dirprefix = (_first != path) and git.repo_rel(path) + ': ' or ''
    progress('bloom: %s%s %d file%s (%d object%s).\n' %
             (dirprefix, msg, len(add), len(add) != 1 and 's'
              or '', add_count, add_count != 1 and 's' or ''))

    tfname = None
    if b is None:
        tfname = os.path.join(path, 'bup.tmp.bloom')
        tf = open(tfname, 'w+')
        b = bloom.create(tfname, f=tf, expected=add_count, k=opt.k)
    count = 0
    icount = 0
    for name in add:
        ix = git.open_idx(name)
        qprogress('bloom: writing %.2f%% (%d/%d objects)\r' %
                  (icount * 100.0 / add_count, icount, add_count))
        b.add_idx(ix)
        count += 1
        icount += len(ix)

    if tfname:
        os.rename(tfname, outfilename)