def __init__(self, id, session, managerlocation, **kwargs):
node.Node.__init__(self, id, session, managerlocation, **kwargs)
self.instrument = instrument.Proxy(self.objectservice, self.session,
self.panel)
self.calclients = ordereddict.OrderedDict()
self.calclients[
'image shift'] = calibrationclient.ImageShiftCalibrationClient(
self)
self.calclients[
'stage position'] = calibrationclient.StageCalibrationClient(self)
self.calclients[
'modeled stage position'] = calibrationclient.ModeledStageCalibrationClient(
self)
self.calclients[
'beam shift'] = calibrationclient.BeamShiftCalibrationClient(self)
self.calclients[
'image beam shift'] = calibrationclient.ImageBeamShiftCalibrationClient(
self)
self.pcal = calibrationclient.PixelSizeCalibrationClient(self)
self.presetsclient = presets.PresetsClient(self)
self.stagelocations = []
self.getLocationsFromDB()
self.correlator = correlator.Correlator()
self.peakfinder = peakfinder.PeakFinder()
self.oldimagedata = None
self.newimagedata = None
self.oldstate = None
self.newstate = None
self.addEventInput(event.MoveToTargetEvent, self.handleMoveEvent)
self.start()
def __init__(self, id, session, managerlocation, **kwargs): TargetMaker.__init__(self, id, session, managerlocation, **kwargs) self.pixelsizecalclient = calibrationclient.PixelSizeCalibrationClient(self) self.addEventInput(event.MakeTargetListEvent, self._makeAtlas) self.presetsclient = presets.PresetsClient(self) self.publishargs = None self.start()
def __init__(self, id, session, managerlocation, **kwargs):
calibrator.Calibrator.__init__(self, id, session, managerlocation,
**kwargs)
self.mag = None
self.bin = None
self.imagepixelsize = None
self.pixeldistance = None
self.calclient = calibrationclient.PixelSizeCalibrationClient(self)
self.shape = None
self.start()
def __init__(self, id, session, managerlocation, **kwargs):
holefinder.HoleFinder.__init__(self, id, session, managerlocation,
**kwargs)
self.hf = holedepthback.HoleFinder()
self.pclient = calclient.PixelSizeCalibrationClient(self)
self.hdimagedata = {
'Hole Untilt filename': None,
'Hole Tilt filename': None,
'I filename': None,
'I0 filename': None,
}
def __init__(self, id, session, managerlocation, **kwargs): self.correlator = correlator.Correlator() self.peakfinder = peakfinder.PeakFinder() self.settle = 5.0 self.threadstop = threading.Event() self.threadlock = threading.Lock() calibrator.Calibrator.__init__(self, id, session, managerlocation, **kwargs) self.calclient = calibrationclient.ModeledStageCalibrationClient(self) self.pcal = calibrationclient.PixelSizeCalibrationClient(self) self.corchannel = None self.axes = ['x', 'y'] self.start()
def __init__(self, id, session, managerlocation, **kwargs):
watchfor = [event.DriftMonitorRequestEvent]
watcher.Watcher.__init__(self, id, session, managerlocation, watchfor,
**kwargs)
self.correlator = correlator.Correlator()
self.peakfinder = peakfinder.PeakFinder()
self.instrument = instrument.Proxy(self.objectservice, self.session,
self.panel)
self.pixsizeclient = calibrationclient.PixelSizeCalibrationClient(self)
self.presetsclient = presets.PresetsClient(self)
self.abortevent = threading.Event()
self.start()
def __init__(self, id, session, managerlocation, **kwargs):
node.Node.__init__(self, id, session, managerlocation, **kwargs)
TargetTransformer.__init__(self)
self.correlator = correlator.Correlator()
self.peakfinder = peakfinder.PeakFinder()
self.instrument = instrument.Proxy(self.objectservice, self.session,
self.panel)
self.calclients = ordereddict.OrderedDict()
self.calclients[
'image shift'] = calibrationclient.ImageShiftCalibrationClient(
self)
self.calclients[
'stage position'] = calibrationclient.StageCalibrationClient(self)
self.calclients[
'modeled stage position'] = calibrationclient.ModeledStageCalibrationClient(
self)
self.calclients[
'image beam shift'] = calibrationclient.ImageBeamShiftCalibrationClient(
self)
self.calclients[
'beam shift'] = calibrationclient.BeamShiftCalibrationClient(self)
self.pixsizeclient = calibrationclient.PixelSizeCalibrationClient(self)
self.presetsclient = presets.PresetsClient(self)
self.navclient = navigator.NavigatorClient(self)
self.target_to_transform = None
self.addEventInput(event.TransformTargetEvent,
self.handleTransformTargetEvent)
self.registrations = {
'correlation': transformregistration.CorrelationRegistration(self),
}
if not hide_incomplete:
self.registrations.update({
'keypoints':
transformregistration.KeyPointsRegistration(self),
'logpolar':
transformregistration.LogPolarRegistration(self),
'identity':
transformregistration.IdentityRegistration(self),
})
self.abortevent = threading.Event()
self.player = player.Player(callback=self.onPlayer)
self.panel.playerEvent(self.player.state())
self.start()
def __init__(self, id, session, managerlocation, **kwargs):
self.loopstop = threading.Event()
self.loopstop.set()
node.Node.__init__(self, id, session, managerlocation, **kwargs)
self.defocus = None
self.instrument = instrument.Proxy(self.objectservice, self.session,
self.panel)
self.calclient = calibrationclient.PixelSizeCalibrationClient(self)
self.manualplayer = player.Player(callback=self.onManualPlayer)
self.comment = ''
self.published_images = []
self.viewstatus = None
self.grid = None
self.start()
def __init__(self, id, session, managerlocation, **kwargs):
calibrator.Calibrator.__init__(self, id, session, managerlocation,
**kwargs)
self.parameters = {
'image shift': calibrationclient.ImageShiftCalibrationClient(self),
'beam shift': calibrationclient.BeamShiftCalibrationClient(self),
}
self.parameter = 'beam shift'
self.pixsizeclient = calibrationclient.PixelSizeCalibrationClient(self)
self.settle = {
'image shift': 5.0,
'beam shift': 1.0,
}
self.axislist = ['x', 'y']
self.aborted = threading.Event()
self.start()
