def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
axis_min = -0.5
axis_max = 10.5
hlines = [0, 5, 10]
axis_label = "Progress towards goal (0-10)"
title_start = "GBO Goal Rating Sheet – Goal "
return [
TrackerInfo(
value=self.goal_1_progress if self.rate_goal_1 else None,
plot_label=title_start + "1",
axis_label=axis_label,
axis_min=axis_min,
axis_max=axis_max,
horizontal_lines=hlines,
),
TrackerInfo(
value=self.goal_2_progress if self.rate_goal_2 else None,
plot_label=title_start + "2",
axis_label=axis_label,
axis_min=axis_min,
axis_max=axis_max,
horizontal_lines=hlines,
),
TrackerInfo(
value=self.goal_3_progress if self.rate_goal_3 else None,
plot_label=title_start + "3",
axis_label=axis_label,
axis_min=axis_min,
axis_max=axis_max,
horizontal_lines=hlines,
),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.total_score(),
plot_label="PANSS total score",
axis_label="Total score ({}-{})".format(
self.MIN_TOTAL, self.MAX_TOTAL),
axis_min=self.MIN_TOTAL - 0.5,
axis_max=self.MAX_TOTAL + 0.5),
TrackerInfo(value=self.score_p(),
plot_label="PANSS P score",
axis_label="P score ({}-{})".format(
self.MIN_P, self.MAX_P),
axis_min=self.MIN_P - 0.5,
axis_max=self.MAX_P + 0.5),
TrackerInfo(value=self.score_n(),
plot_label="PANSS N score",
axis_label="N score ({}-{})".format(
self.MIN_N, self.MAX_N),
axis_min=self.MIN_N - 0.5,
axis_max=self.MAX_N + 0.5),
TrackerInfo(value=self.score_g(),
plot_label="PANSS G score",
axis_label="G score ({}-{})".format(
self.MIN_G, self.MAX_G),
axis_min=self.MIN_G - 0.5,
axis_max=self.MAX_G + 0.5),
TrackerInfo(value=self.composite(),
plot_label="PANSS composite score ({} to {})".format(
self.MIN_P_MINUS_N, self.MAX_P_MINUS_N),
axis_label="P - N"),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(
value=self.total_score(),
plot_label="IES-R total score (lower is better)",
axis_label=f"Total score (out of {self.MAX_TOTAL})",
axis_min=-0.5,
axis_max=self.MAX_TOTAL + 0.5,
),
TrackerInfo(
value=self.avoidance_score(),
plot_label="IES-R avoidance score",
axis_label=f"Avoidance score (out of {self.MAX_AVOIDANCE})",
axis_min=-0.5,
axis_max=self.MAX_AVOIDANCE + 0.5,
),
TrackerInfo(
value=self.intrusion_score(),
plot_label="IES-R intrusion score",
axis_label=f"Intrusion score (out of {self.MAX_INTRUSION})",
axis_min=-0.5,
axis_max=self.MAX_INTRUSION + 0.5,
),
TrackerInfo(
value=self.hyperarousal_score(),
plot_label="IES-R hyperarousal score",
axis_label=
f"Hyperarousal score (out of {self.MAX_HYPERAROUSAL})", # noqa
axis_min=-0.5,
axis_max=self.MAX_HYPERAROUSAL + 0.5,
),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
# $ signs enable TEX mode for matplotlib, e.g. "$BMI (kg/m^2)$"
return [
TrackerInfo(
value=self.bmi(),
plot_label="Body mass index",
axis_label="BMI (kg/m^2)",
axis_min=10,
axis_max=42,
horizontal_lines=[13, 15, 16, 17, 17.5, 18.5, 25, 30, 35, 40],
horizontal_labels=[
# positioned near the mid-range for some:
TrackerLabel(
12.5,
self.wxstring(req, "underweight_under_13"),
LabelAlignment.top,
),
TrackerLabel(14, self.wxstring(req, "underweight_13_15")),
TrackerLabel(
15.5, self.wxstring(req, "underweight_15_16")
),
TrackerLabel(
16.5, self.wxstring(req, "underweight_16_17")
),
TrackerLabel(
17.25, self.wxstring(req, "underweight_17_17.5")
),
TrackerLabel(
18, self.wxstring(req, "underweight_17.5_18.5")
),
TrackerLabel(21.75, self.wxstring(req, "normal")),
TrackerLabel(27.5, self.wxstring(req, "overweight")),
TrackerLabel(32.5, self.wxstring(req, "obese_1")),
TrackerLabel(37.6, self.wxstring(req, "obese_2")),
TrackerLabel(
40.5,
self.wxstring(req, "obese_3"),
LabelAlignment.bottom,
),
],
aspect_ratio=1.0,
),
TrackerInfo(
value=self.mass_kg,
plot_label="Mass (kg)",
axis_label="Mass (kg)",
),
TrackerInfo(
value=self.waist_cm,
plot_label="Waist circumference (cm)",
axis_label="Waist circumference (cm)",
),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.get_tto_qol(),
plot_label="Quality of life: time trade-off",
axis_label="TTO QoL (0-1)",
axis_min=0,
axis_max=1),
TrackerInfo(value=self.get_rs_qol(),
plot_label="Quality of life: rating scale",
axis_label="RS QoL (0-1)",
axis_min=0,
axis_max=1),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(
value=self.total_score(),
plot_label="PHQ-9 total score (rating depressive symptoms)",
axis_label="Score for Q1-9 (out of {})".format(
self.MAX_SCORE_MAIN),
axis_min=-0.5,
axis_max=self.MAX_SCORE_MAIN + 0.5,
axis_ticks=[
TrackerAxisTick(27, "27"),
TrackerAxisTick(25, "25"),
TrackerAxisTick(20, "20"),
TrackerAxisTick(15, "15"),
TrackerAxisTick(10, "10"),
TrackerAxisTick(5, "5"),
TrackerAxisTick(0, "0"),
],
horizontal_lines=[19.5, 14.5, 9.5, 4.5],
horizontal_labels=[
TrackerLabel(23, req.wappstring("severe")),
TrackerLabel(17, req.wappstring("moderately_severe")),
TrackerLabel(12, req.wappstring("moderate")),
TrackerLabel(7, req.wappstring("mild")),
TrackerLabel(2.25, req.wappstring("none")),
])
]
def get_crp_tracker(self, req: CamcopsRequest) -> TrackerInfo:
axis_min = -0.5
axis_max = 9.0
axis_ticks = [
TrackerAxisTick(n, str(n)) for n in range(0,
int(axis_max) + 1)
]
horizontal_lines = [
self.CRP_MODERATE_HIGH_CUTOFF,
self.CRP_LOW_MODERATE_CUTOFF,
self.CRP_REMISSION_LOW_CUTOFF,
0,
]
horizontal_labels = [
TrackerLabel(6.8, self.wxstring(req, "high")),
TrackerLabel(3.75, self.wxstring(req, "moderate")),
TrackerLabel(2.65, self.wxstring(req, "low")),
TrackerLabel(1.2, self.wxstring(req, "remission")),
]
return TrackerInfo(
value=self.das28_crp(),
plot_label="DAS28-CRP",
axis_label="DAS28-CRP",
axis_min=axis_min,
axis_max=axis_max,
axis_ticks=axis_ticks,
horizontal_lines=horizontal_lines,
horizontal_labels=horizontal_labels,
)
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(
value=self.clinical_score(),
plot_label="CORE-10 clinical score (rating distress)",
axis_label="Clinical score (out of {})".format(self.MAX_SCORE),
axis_min=-0.5,
axis_max=self.MAX_SCORE + 0.5,
axis_ticks=[
TrackerAxisTick(40, "40"),
TrackerAxisTick(35, "35"),
TrackerAxisTick(30, "30"),
TrackerAxisTick(25, "25"),
TrackerAxisTick(20, "20"),
TrackerAxisTick(15, "15"),
TrackerAxisTick(10, "10"),
TrackerAxisTick(5, "5"),
TrackerAxisTick(0, "0"),
],
horizontal_lines=[
30,
20,
10,
],
)
]
def get_esr_tracker(self, req: CamcopsRequest) -> TrackerInfo:
axis_min = -0.5
axis_max = 10.0
axis_ticks = [
TrackerAxisTick(n, str(n)) for n in range(0,
int(axis_max) + 1)
]
horizontal_lines = [
self.ESR_MODERATE_HIGH_CUTOFF,
self.ESR_LOW_MODERATE_CUTOFF,
self.ESR_REMISSION_LOW_CUTOFF,
0,
]
horizontal_labels = [
TrackerLabel(7.55, self.wxstring(req, "high")),
TrackerLabel(4.15, self.wxstring(req, "moderate")),
TrackerLabel(2.9, self.wxstring(req, "low")),
TrackerLabel(1.3, self.wxstring(req, "remission")),
]
return TrackerInfo(
value=self.das28_esr(),
plot_label="DAS28-ESR",
axis_label="DAS28-ESR",
axis_min=axis_min,
axis_max=axis_max,
axis_ticks=axis_ticks,
horizontal_lines=horizontal_lines,
horizontal_labels=horizontal_labels,
)
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
line_step = 20
preliminary_cutoff = 33
return [
TrackerInfo(
value=self.total_score(),
plot_label="PCL-5 total score",
axis_label=f"Total score ({self.MIN_SCORE}-{self.MAX_SCORE})",
axis_min=self.MIN_SCORE - 0.5,
axis_max=self.MAX_SCORE + 0.5,
axis_ticks=regular_tracker_axis_ticks_int(self.MIN_SCORE,
self.MAX_SCORE,
step=line_step),
horizontal_lines=equally_spaced_int(
self.MIN_SCORE + line_step,
self.MAX_SCORE - line_step,
step=line_step,
) + [preliminary_cutoff],
horizontal_labels=[
TrackerLabel(
preliminary_cutoff,
self.wxstring(req, "preliminary_cutoff"),
)
],
)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
line_step = 20
threshold_line = self.DEPRESSION_RISK_THRESHOLD - 0.5
# noinspection PyTypeChecker
return [
TrackerInfo(
value=self.total_score(),
plot_label="CESD total score",
axis_label=f"Total score ({self.MIN_SCORE}-{self.MAX_SCORE})",
axis_min=self.MIN_SCORE - 0.5,
axis_max=self.MAX_SCORE + 0.5,
axis_ticks=regular_tracker_axis_ticks_int(self.MIN_SCORE,
self.MAX_SCORE,
step=line_step),
horizontal_lines=equally_spaced_int(
self.MIN_SCORE + line_step,
self.MAX_SCORE - line_step,
step=line_step,
) + [threshold_line],
horizontal_labels=[
TrackerLabel(
threshold_line,
self.wxstring(req, "depression_or_risk_of"),
)
],
)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
axis_min = self.MINIMUM - 0.5
axis_max = self.MAXIMUM + 0.5
axis_ticks = [
TrackerAxisTick(n, str(n)) for n in range(0,
int(axis_max) + 1)
]
horizontal_lines = [self.MAXIMUM, self.ACTIVE_CUTOFF, self.MINIMUM]
horizontal_labels = [
TrackerLabel(self.ACTIVE_CUTOFF + 0.5,
self.wxstring(req, "active")),
TrackerLabel(self.ACTIVE_CUTOFF - 0.5,
self.wxstring(req, "inactive")),
]
return [
TrackerInfo(
value=self.basdai(),
plot_label="BASDAI",
axis_label="BASDAI",
axis_min=axis_min,
axis_max=axis_max,
axis_ticks=axis_ticks,
horizontal_lines=horizontal_lines,
horizontal_labels=horizontal_labels,
)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(
value=self.total_score(),
plot_label="PHQ-9 total score (rating depressive symptoms)",
axis_label=f"Score for Q1-9 (out of {self.MAX_SCORE_MAIN})",
axis_min=-0.5,
axis_max=self.MAX_SCORE_MAIN + 0.5,
axis_ticks=[
TrackerAxisTick(27, "27"),
TrackerAxisTick(25, "25"),
TrackerAxisTick(20, "20"),
TrackerAxisTick(15, "15"),
TrackerAxisTick(10, "10"),
TrackerAxisTick(5, "5"),
TrackerAxisTick(0, "0"),
],
horizontal_lines=[19.5, 14.5, 9.5, 4.5],
horizontal_labels=[
TrackerLabel(23, req.sstring(SS.SEVERE)),
TrackerLabel(17, req.sstring(SS.MODERATELY_SEVERE)),
TrackerLabel(12, req.sstring(SS.MODERATE)),
TrackerLabel(7, req.sstring(SS.MILD)),
TrackerLabel(2.25, req.sstring(SS.NONE)),
],
)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(
value=self.anxiety_score(),
plot_label="HADS anxiety score",
axis_label=f"Anxiety score (out of {self.MAX_ANX_SCORE})",
axis_min=-0.5,
axis_max=self.MAX_ANX_SCORE + 0.5,
),
TrackerInfo(
value=self.depression_score(),
plot_label="HADS depression score",
axis_label=f"Depression score (out of {self.MAX_DEP_SCORE})",
axis_min=-0.5,
axis_max=self.MAX_DEP_SCORE + 0.5,
),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [TrackerInfo(
value=self.total_score(),
plot_label="CGI total score",
axis_label="Total score (out of {})".format(self.MAX_SCORE),
axis_min=-0.5,
axis_max=self.MAX_SCORE + 0.5
)]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [TrackerInfo(
value=self.total_score(),
plot_label="BDI total score (rating depressive symptoms)",
axis_label="Score for Q1-21 (out of {})".format(MAX_SCORE),
axis_min=-0.5,
axis_max=MAX_SCORE + 0.5
)]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.total_score(),
plot_label="GAF score (rating overall functioning)",
axis_label="Score (1-100)",
axis_min=0.5,
axis_max=100.5)
]
def tracker_element(cls, value: float, plot_label: str) -> TrackerInfo:
return TrackerInfo(
value=value,
plot_label="RAND-36: " + plot_label,
axis_label="Scale score (out of 100)",
axis_min=-0.5,
axis_max=100.5,
)
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.utility,
plot_label="Quality of life: standard gamble",
axis_label="QoL (0-1)",
axis_min=0,
axis_max=1)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.total_score(),
plot_label="CAPS total score",
axis_label="Total score (out of 32)",
axis_min=-0.5,
axis_max=32.5)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
scoredict = self.get_score()
return [
TrackerInfo(
value=scoredict['total'],
plot_label="IFS total score (higher is better)",
axis_label="Total score (out of {})".format(self.MAX_TOTAL),
axis_min=-0.5,
axis_max=self.MAX_TOTAL + 0.5
),
TrackerInfo(
value=scoredict['wm'],
plot_label="IFS working memory index (higher is better)",
axis_label="Total score (out of {})".format(self.MAX_WM),
axis_min=-0.5,
axis_max=self.MAX_WM + 0.5
),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [TrackerInfo(
value=self.total_score(),
plot_label="SWEMWBS total score (rating mental well-being)",
axis_label="Total score ({}-{})".format(
self.MINTOTALSCORE, self.MAXTOTALSCORE),
axis_min=self.MINTOTALSCORE - 0.5,
axis_max=self.MAXTOTALSCORE + 0.5
)]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.total_score(),
plot_label="PDSS total score (lower is better)",
axis_label="Total score (out of {})".format(
self.MAX_TOTAL),
axis_min=-0.5,
axis_max=self.MAX_TOTAL + 0.5)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.total_score(),
plot_label="WSAS total score (lower is better)",
axis_label="Total score (out of {}–{})".format(
self.MAX_IF_RETIRED, self.MAX_IF_WORKING),
axis_min=-0.5,
axis_max=self.MAX_IF_WORKING + 0.5)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.total_score(),
plot_label="ACE-III total score",
axis_label="Total score (out of 100)",
axis_min=-0.5,
axis_max=100.5,
horizontal_lines=[82.5, 88.5])
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [TrackerInfo(
value=self.total_score(),
plot_label="DAST total score",
axis_label="Total score (out of {})".format(self.NQUESTIONS),
axis_min=-0.5,
axis_max=self.NQUESTIONS + 0.5,
horizontal_lines=[10.5, 5.5]
)]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(value=self.total_score(),
plot_label="AUDIT total score",
axis_label="Total score (out of 40)",
axis_min=-0.5,
axis_max=40.5,
horizontal_lines=[7.5])
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
scoredict = self.get_score()
return [
TrackerInfo(
value=scoredict["total"],
plot_label="IFS total score (higher is better)",
axis_label=f"Total score (out of {self.MAX_TOTAL})",
axis_min=-0.5,
axis_max=self.MAX_TOTAL + 0.5,
),
TrackerInfo(
value=scoredict["wm"],
plot_label="IFS working memory index (higher is better)",
axis_label=f"Total score (out of {self.MAX_WM})",
axis_min=-0.5,
axis_max=self.MAX_WM + 0.5,
),
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
return [
TrackerInfo(
value=self.total_score(),
plot_label="PSWQ total score (lower is better)",
axis_label=f"Total score ({self.MIN_TOTAL}–{self.MAX_TOTAL})",
axis_min=self.MIN_TOTAL - 0.5,
axis_max=self.MAX_TOTAL + 0.5,
)
]
def get_trackers(self, req: CamcopsRequest) -> List[TrackerInfo]:
axis_min = -0.5
axis_max = 7.5
axis_ticks = [
TrackerAxisTick(n, str(n)) for n in range(0, int(axis_max) + 1)
]
horizontal_lines = [
self.HIGH_VERY_HIGH_CUTOFF,
self.MODERATE_HIGH_CUTOFF,
self.INACTIVE_MODERATE_CUTOFF,
0,
]
horizontal_labels = [
TrackerLabel(5.25, self.wxstring(req, "very_high")),
TrackerLabel(2.8, self.wxstring(req, "high")),
TrackerLabel(1.7, self.wxstring(req, "moderate")),
TrackerLabel(0.65, self.wxstring(req, "inactive")),
]
return [
TrackerInfo(
value=self.asdas_crp(),
plot_label="ASDAS-CRP",
axis_label="ASDAS-CRP",
axis_min=axis_min,
axis_max=axis_max,
axis_ticks=axis_ticks,
horizontal_lines=horizontal_lines,
horizontal_labels=horizontal_labels,
),
TrackerInfo(
value=self.asdas_esr(),
plot_label="ASDAS-ESR",
axis_label="ASDAS-ESR",
axis_min=axis_min,
axis_max=axis_max,
axis_ticks=axis_ticks,
horizontal_lines=horizontal_lines,
horizontal_labels=horizontal_labels,
),
]
