Example #1
0
class WebSocketServiceTest(unittest.TestCase):
    def setUp(self):
        self.service = WebSocketService(FSWorkspaceManager())

    @unittest.skipIf(os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1', 'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_stores(self):
        data_stores = self.service.get_data_stores()
        self.assertIsInstance(data_stores, list)
        self.assertGreater(len(data_stores), 1)
        self.assertIn('local', [ds['id'] for ds in data_stores])

    @unittest.skipIf(os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1', 'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_sources(self):
        data_stores = self.service.get_data_stores()
        for ds in data_stores:
            data_sources = self.service.get_data_sources(ds['id'], monitor=Monitor.NONE)
            self.assertIsInstance(data_sources, list)

    def test_get_operations(self):
        ops = self.service.get_operations()
        self.assertIsInstance(ops, list)
        self.assertGreater(len(ops), 20)
        self.assertIn('open_dataset', [op['name'] for op in ops])
        open_dataset_op = [op for op in ops if op['name'] == 'open_dataset'][0]
        keys = sorted(list(open_dataset_op.keys()))
        self.assertEqual(keys, ['header', 'input', 'name', 'output', 'qualified_name'])
        keys = sorted(list(open_dataset_op['header'].keys()))
        self.assertEqual(keys, ['description', 'tags'])
        names = [props['name'] for props in open_dataset_op['input']]
        self.assertEqual(names, ['ds_name', 'time_range', 'region', 'var_names', 'harmonize'])
        names = [props['name'] for props in open_dataset_op['output']]
        self.assertEqual(names, ['return'])
Example #2
0
 def setUp(self):
     manager = FSWorkspaceManager(root_path=self.get_root_path())
     self.service = WebSocketService(manager)
     self._workspace_dir = manager.resolve_path(self.get_workspace_path())
     if os.path.exists(self._workspace_dir):
         shutil.rmtree(self._workspace_dir)
Example #3
0
class WebSocketServiceTest(unittest.TestCase):
    def get_root_path(self):
        return None

    def get_workspace_path(self):
        return os.path.join(os.path.dirname(__file__), 'WebSocketServiceTest')

    def setUp(self):
        manager = FSWorkspaceManager(root_path=self.get_root_path())
        self.service = WebSocketService(manager)
        self._workspace_dir = manager.resolve_path(self.get_workspace_path())
        if os.path.exists(self._workspace_dir):
            shutil.rmtree(self._workspace_dir)

    def tearDown(self):
        if os.path.exists(self._workspace_dir):
            shutil.rmtree(self._workspace_dir)

    @unittest.skipIf(
        os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1',
        'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_stores(self):
        data_stores = self.service.get_data_stores()
        self.assertIsInstance(data_stores, list)
        self.assertGreater(len(data_stores), 1)
        for ds in data_stores:
            self.assertIn('id', ds)
            self.assertIsInstance(ds['id'], str)
            self.assertIn('isLocal', ds)
            self.assertIsInstance(ds['isLocal'], bool)
            self.assertIn('description', ds)
            self.assertIn('notices', ds)
            self.assertIsInstance(ds['notices'], list)
        self.assertIn('local', [ds['id'] for ds in data_stores])

    @unittest.skipIf(
        os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1',
        'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_sources(self):
        data_stores = self.service.get_data_stores()
        for ds in data_stores:
            data_sources = self.service.get_data_sources(ds['id'],
                                                         monitor=Monitor.NONE)
            self.assertIsInstance(data_sources, list)

    def test_get_operations(self):
        ops = self.service.get_operations()
        self.assertIsInstance(ops, list)
        self.assertGreater(len(ops), 20)

        self.assertIn('open_dataset', [op['name'] for op in ops])
        open_dataset_op = [op for op in ops if op['name'] == 'open_dataset'][0]
        keys = sorted(list(open_dataset_op.keys()))
        self.assertEqual(keys, [
            'has_monitor', 'header', 'inputs', 'name', 'outputs',
            'qualified_name'
        ])
        keys = sorted(list(open_dataset_op['header'].keys()))
        self.assertEqual(keys, ['description', 'res_pattern', 'tags'])
        names = [props['name'] for props in open_dataset_op['inputs']]
        self.assertEqual(names, [
            'ds_id', 'time_range', 'region', 'var_names', 'normalize',
            'force_local', 'local_ds_id'
        ])
        names = [props['name'] for props in open_dataset_op['outputs']]
        self.assertEqual(names, ['return'])

    def test_get_operations_with_deprecations(self):
        from cate.core.op import op, op_input, op_output, OpRegistry

        registry = OpRegistry()

        @op(registry=registry, deprecated=True)
        def my_deprecated_op():
            pass

        # noinspection PyUnusedLocal
        @op_input('a', registry=registry)
        @op_input('b', registry=registry, deprecated=True)
        @op_output('u', registry=registry, deprecated=True)
        @op_output('v', registry=registry)
        def my_op_with_deprecated_io(a, b=None):
            pass

        self.assertIsNotNone(
            registry.get_op(my_deprecated_op, fail_if_not_exists=True))
        self.assertIsNotNone(
            registry.get_op(my_op_with_deprecated_io, fail_if_not_exists=True))

        ops = self.service.get_operations(registry=registry)
        op_names = {op['name'] for op in ops}
        self.assertIn('tests.webapi.test_websocket.my_op_with_deprecated_io',
                      op_names)
        self.assertNotIn('tests.webapi.test_websocket.my_deprecated_op',
                         op_names)

        op = [
            op for op in ops if op['name'] ==
            'tests.webapi.test_websocket.my_op_with_deprecated_io'
        ][0]
        self.assertEqual(len(op['inputs']), 1)
        self.assertEqual(op['inputs'][0]['name'], 'a')
        self.assertEqual(len(op['outputs']), 1)
        self.assertEqual(op['outputs'][0]['name'], 'v')

    def test_get_workspace_variable_statistics(self):
        self._load_precip_dataset_in_workspace()
        stat = self.service.get_workspace_variable_statistics(
            self.get_workspace_path(),
            res_name='ds',
            var_name='temperature',
            var_index=[0])
        self.assertAlmostEqual(stat['min'], 5.1)
        self.assertAlmostEqual(stat['max'], 26.2)

    def test_get_resource_values(self):
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(workspaces, [])
        self._load_precip_dataset_in_workspace()
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(1, len(workspaces))
        self.assertEqual(1, len(workspaces[0]['workflow']['steps']))

        values = self.service.extract_pixel_values(self.get_workspace_path(),
                                                   'ds', (10.22, 34.52),
                                                   dict(time='2014-09-11'))

        self.assertAlmostEqual(values['lat'], 34.5)
        self.assertAlmostEqual(values['lon'], 10.2)
        self.assertAlmostEqual(values['precipitation'], 5.5)
        self.assertAlmostEqual(values['temperature'], 32.9)

        self.service.clean_workspace(self.get_workspace_path())
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(1, len(workspaces))
        self.assertEqual(0, len(workspaces[0]['workflow']['steps']))

        self.service.close_workspace(self.get_workspace_path())
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(workspaces, [])

    def test_workspace_json(self):
        workspace_json = self._load_precip_dataset_in_workspace()
        self.assertIn('base_dir', workspace_json)
        self.assertEqual(self.get_workspace_path(), workspace_json['base_dir'])

    def _load_precip_dataset_in_workspace(self) -> dict:
        file = os.path.join(os.path.dirname(__file__), '..', 'data',
                            'precip_and_temp.nc')
        workspace_json = self.service.new_workspace(self.get_workspace_path())
        self.service.save_workspace(self.get_workspace_path(),
                                    monitor=Monitor.NONE)
        self.service.set_workspace_resource(self.get_workspace_path(),
                                            'cate.ops.io.read_netcdf',
                                            dict(file=dict(value=file)),
                                            res_name='ds',
                                            overwrite=False,
                                            monitor=Monitor.NONE)
        return workspace_json

    def test_update_file_node(self):
        path = ''
        node = self.service.update_file_node(path)
        self._assert_dir_node_props(node, '', no_stats=True)

        path = __file__
        node = self.service.update_file_node(path)
        self._assert_file_node_props(node, os.path.basename(path))

        if platform.system() == 'Windows':
            # Test with just drive letter prefix
            path = os.path.abspath('.')[0:2]
            node = self.service.update_file_node(path)
            self._assert_dir_node_props(node, path)

        path = os.path.normpath(
            os.path.join(os.path.dirname(__file__), '..', '..'))
        node = self.service.update_file_node(path)
        self._assert_dir_node_props(node, os.path.basename(path))

    def _assert_file_node_props(self, file_node: Dict, name: str):
        self._assert_file_node_props_base(file_node, name)
        self.assertIn('isDir', file_node)
        self.assertEqual(file_node['isDir'], False)
        self.assertNotIn('childNodes', file_node)

    def _assert_dir_node_props(self,
                               file_node: Dict,
                               name: str,
                               no_stats=False):
        self._assert_file_node_props_base(file_node, name, no_stats=no_stats)
        self.assertIn('isDir', file_node)
        self.assertEqual(file_node['isDir'], True)
        self.assertIn('childNodes', file_node)
        self.assertIsNotNone(file_node['childNodes'])

    def _assert_file_node_props_base(self,
                                     file_node: Dict,
                                     name: str,
                                     no_stats=False):
        self.assertIsNotNone(file_node)
        self.assertIn('name', file_node)
        self.assertEqual(file_node['name'], name)
        if not no_stats:
            self.assertIn('size', file_node)
            self.assertIn('lastModified', file_node)
        self.assertIn('isDir', file_node)
Example #4
0
def service_factory(application):
    return WebSocketService(application.workspace_manager)
Example #5
0
class WebSocketServiceTest(unittest.TestCase):
    def setUp(self):
        self.service = WebSocketService(FSWorkspaceManager())
        self.base_dir = base_dir = os.path.abspath('WebSocketServiceTest')
        if os.path.exists(self.base_dir):
            shutil.rmtree(base_dir)
        os.mkdir(self.base_dir)

    def tearDown(self):
        if os.path.exists(self.base_dir):
            shutil.rmtree(self.base_dir)

    @unittest.skipIf(
        os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1',
        'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_stores(self):
        data_stores = self.service.get_data_stores()
        self.assertIsInstance(data_stores, list)
        self.assertGreater(len(data_stores), 1)
        for ds in data_stores:
            self.assertIn('id', ds)
            self.assertIsInstance(ds['id'], str)
            self.assertIn('isLocal', ds)
            self.assertIsInstance(ds['isLocal'], bool)
            self.assertIn('description', ds)
            self.assertIn('notices', ds)
            self.assertIsInstance(ds['notices'], list)
        self.assertIn('local', [ds['id'] for ds in data_stores])

    @unittest.skipIf(
        os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1',
        'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_sources(self):
        data_stores = self.service.get_data_stores()
        for ds in data_stores:
            data_sources = self.service.get_data_sources(ds['id'],
                                                         monitor=Monitor.NONE)
            self.assertIsInstance(data_sources, list)

    def test_get_operations(self):
        ops = self.service.get_operations()
        self.assertIsInstance(ops, list)
        self.assertGreater(len(ops), 20)

        self.assertIn('open_dataset', [op['name'] for op in ops])
        open_dataset_op = [op for op in ops if op['name'] == 'open_dataset'][0]
        keys = sorted(list(open_dataset_op.keys()))
        self.assertEqual(keys, [
            'has_monitor', 'header', 'inputs', 'name', 'outputs',
            'qualified_name'
        ])
        keys = sorted(list(open_dataset_op['header'].keys()))
        self.assertEqual(keys, ['description', 'res_pattern', 'tags'])
        names = [props['name'] for props in open_dataset_op['inputs']]
        self.assertEqual(names, [
            'ds_id', 'time_range', 'region', 'var_names', 'normalize',
            'force_local', 'local_ds_id'
        ])
        names = [props['name'] for props in open_dataset_op['outputs']]
        self.assertEqual(names, ['return'])

    def test_get_operations_with_deprecations(self):
        from cate.core.op import op, op_input, op_output, OpRegistry

        registry = OpRegistry()

        @op(registry=registry, deprecated=True)
        def my_deprecated_op():
            pass

        @op_input('a', registry=registry)
        @op_input('b', registry=registry, deprecated=True)
        @op_output('u', registry=registry, deprecated=True)
        @op_output('v', registry=registry)
        def my_op_with_deprecated_io(a, b=None):
            pass

        self.assertIsNotNone(
            registry.get_op(my_deprecated_op, fail_if_not_exists=True))
        self.assertIsNotNone(
            registry.get_op(my_op_with_deprecated_io, fail_if_not_exists=True))

        ops = self.service.get_operations(registry=registry)
        op_names = {op['name'] for op in ops}
        self.assertIn('test.webapi.test_websocket.my_op_with_deprecated_io',
                      op_names)
        self.assertNotIn('test.webapi.test_websocket.my_deprecated_op',
                         op_names)

        op = [
            op for op in ops if op['name'] ==
            'test.webapi.test_websocket.my_op_with_deprecated_io'
        ][0]
        self.assertEqual(len(op['inputs']), 1)
        self.assertEqual(op['inputs'][0]['name'], 'a')
        self.assertEqual(len(op['outputs']), 1)
        self.assertEqual(op['outputs'][0]['name'], 'v')

    def test_get_workspace_variable_statistics(self):
        self.load_precip_dataset()
        stat = self.service.get_workspace_variable_statistics(
            self.base_dir,
            res_name='ds',
            var_name='temperature',
            var_index=[0])
        self.assertAlmostEqual(stat['min'], 5.1)
        self.assertAlmostEqual(stat['max'], 26.2)

    def test_get_resource_values(self):
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(workspaces, [])
        self.load_precip_dataset()
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(1, len(workspaces))
        self.assertEqual(1, len(workspaces[0]['workflow']['steps']))

        values = self.service.extract_pixel_values(self.base_dir, 'ds',
                                                   (10.22, 34.52),
                                                   dict(time='2014-09-11'))

        self.assertAlmostEqual(values['lat'], 34.5)
        self.assertAlmostEqual(values['lon'], 10.2)
        self.assertAlmostEqual(values['precipitation'], 5.5)
        self.assertAlmostEqual(values['temperature'], 32.9)

        self.service.clean_workspace(self.base_dir)
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(1, len(workspaces))
        self.assertEqual(0, len(workspaces[0]['workflow']['steps']))

        self.service.close_workspace(self.base_dir)
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(workspaces, [])

    def load_precip_dataset(self):
        file = os.path.join(os.path.dirname(__file__), '..', 'data',
                            'precip_and_temp.nc')
        self.service.new_workspace(self.base_dir)
        self.service.set_workspace_resource(self.base_dir,
                                            'cate.ops.io.read_netcdf',
                                            dict(file=dict(value=file)),
                                            res_name='ds',
                                            overwrite=False,
                                            monitor=Monitor.NONE)
Example #6
0
 def setUp(self):
     self.service = WebSocketService(FSWorkspaceManager())
     self.base_dir = base_dir = os.path.abspath('WebSocketServiceTest')
     if os.path.exists(self.base_dir):
         shutil.rmtree(base_dir)
     os.mkdir(self.base_dir)
Example #7
0
class WebSocketServiceTest(unittest.TestCase):
    def setUp(self):
        self.service = WebSocketService(FSWorkspaceManager())
        self.base_dir = base_dir = os.path.abspath('WebSocketServiceTest')
        if os.path.exists(self.base_dir):
            shutil.rmtree(base_dir)
        os.mkdir(self.base_dir)

    def tearDown(self):
        if os.path.exists(self.base_dir):
            shutil.rmtree(self.base_dir)

    @unittest.skipIf(os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1', 'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_stores(self):
        data_stores = self.service.get_data_stores()
        self.assertIsInstance(data_stores, list)
        self.assertGreater(len(data_stores), 1)
        for ds in data_stores:
            self.assertIn('id', ds)
            self.assertIsInstance(ds['id'], str)
            self.assertIn('isLocal', ds)
            self.assertIsInstance(ds['isLocal'], bool)
            self.assertIn('description', ds)
            self.assertIn('notices', ds)
            self.assertIsInstance(ds['notices'], list)
        self.assertIn('local', [ds['id'] for ds in data_stores])

    @unittest.skipIf(os.environ.get('CATE_DISABLE_WEB_TESTS', None) == '1', 'CATE_DISABLE_WEB_TESTS = 1')
    def test_get_data_sources(self):
        data_stores = self.service.get_data_stores()
        for ds in data_stores:
            data_sources = self.service.get_data_sources(ds['id'], monitor=Monitor.NONE)
            self.assertIsInstance(data_sources, list)

    def test_get_operations(self):
        ops = self.service.get_operations()
        self.assertIsInstance(ops, list)
        self.assertGreater(len(ops), 20)

        self.assertIn('open_dataset', [op['name'] for op in ops])
        open_dataset_op = [op for op in ops if op['name'] == 'open_dataset'][0]
        keys = sorted(list(open_dataset_op.keys()))
        self.assertEqual(keys, ['has_monitor', 'header', 'inputs', 'name', 'outputs', 'qualified_name'])
        keys = sorted(list(open_dataset_op['header'].keys()))
        self.assertEqual(keys, ['description', 'res_pattern', 'tags'])
        names = [props['name'] for props in open_dataset_op['inputs']]
        self.assertEqual(names, ['ds_id', 'time_range', 'region', 'var_names', 'normalize',
                                 'force_local', 'local_ds_id'])
        names = [props['name'] for props in open_dataset_op['outputs']]
        self.assertEqual(names, ['return'])

    def test_get_operations_with_deprecations(self):
        from cate.core.op import op, op_input, op_output, OpRegistry

        registry = OpRegistry()

        @op(registry=registry, deprecated=True)
        def my_deprecated_op():
            pass

        @op_input('a', registry=registry)
        @op_input('b', registry=registry, deprecated=True)
        @op_output('u', registry=registry, deprecated=True)
        @op_output('v', registry=registry)
        def my_op_with_deprecated_io(a, b=None):
            pass

        self.assertIsNotNone(registry.get_op(my_deprecated_op, fail_if_not_exists=True))
        self.assertIsNotNone(registry.get_op(my_op_with_deprecated_io, fail_if_not_exists=True))

        ops = self.service.get_operations(registry=registry)
        op_names = {op['name'] for op in ops}
        self.assertIn('test.webapi.test_websocket.my_op_with_deprecated_io', op_names)
        self.assertNotIn('test.webapi.test_websocket.my_deprecated_op', op_names)

        op = [op for op in ops if op['name'] == 'test.webapi.test_websocket.my_op_with_deprecated_io'][0]
        self.assertEqual(len(op['inputs']), 1)
        self.assertEqual(op['inputs'][0]['name'], 'a')
        self.assertEqual(len(op['outputs']), 1)
        self.assertEqual(op['outputs'][0]['name'], 'v')

    def test_get_workspace_variable_statistics(self):
        self.load_precip_dataset()
        stat = self.service.get_workspace_variable_statistics(self.base_dir,
                                                              res_name='ds',
                                                              var_name='temperature',
                                                              var_index=[0])
        self.assertAlmostEqual(stat['min'], 5.1)
        self.assertAlmostEqual(stat['max'], 26.2)

    def test_get_resource_values(self):
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(workspaces, [])
        self.load_precip_dataset()
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(1, len(workspaces))
        self.assertEqual(1, len(workspaces[0]['workflow']['steps']))

        values = self.service.extract_pixel_values(self.base_dir, 'ds', (10.22, 34.52), dict(time='2014-09-11'))

        self.assertAlmostEqual(values['lat'], 34.5)
        self.assertAlmostEqual(values['lon'], 10.2)
        self.assertAlmostEqual(values['precipitation'], 5.5)
        self.assertAlmostEqual(values['temperature'], 32.9)

        self.service.clean_workspace(self.base_dir)
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(1, len(workspaces))
        self.assertEqual(0, len(workspaces[0]['workflow']['steps']))

        self.service.close_workspace(self.base_dir)
        workspaces = self.service.get_open_workspaces()
        self.assertEqual(workspaces, [])

    def load_precip_dataset(self):
        file = os.path.join(os.path.dirname(__file__), '..', 'data', 'precip_and_temp.nc')
        self.service.new_workspace(self.base_dir)
        self.service.set_workspace_resource(self.base_dir,
                                            'cate.ops.io.read_netcdf',
                                            dict(file=dict(value=file)),
                                            res_name='ds',
                                            overwrite=False,
                                            monitor=Monitor.NONE)
Example #8
0
 def setUp(self):
     self.service = WebSocketService(FSWorkspaceManager())
     self.base_dir = base_dir = os.path.abspath('WebSocketServiceTest')
     if os.path.exists(self.base_dir):
         shutil.rmtree(base_dir)
     os.mkdir(self.base_dir)
Example #9
0
 def setUp(self):
     self.service = WebSocketService(FSWorkspaceManager())