def find_files(info_dict, filename_cache=None):
# searches for the raw data files and the cellpyfile-name
for run_name in info_dict["filenames"]:
logger.debug(f"checking for {run_name}")
if prms._use_filename_cache:
raw_files, cellpyfile, filename_cache = filefinder.search_for_files(
run_name, cache=filename_cache)
else:
raw_files, cellpyfile = filefinder.search_for_files(run_name)
if not raw_files:
raw_files = None
info_dict["raw_file_names"].append(raw_files)
info_dict["cellpy_file_names"].append(cellpyfile)
return info_dict
def test_search_for_files_with_dirs():
import os
raw_files, cellpy_file = filefinder.search_for_files(
fdv.run_name,
raw_file_dir=fdv.raw_data_dir,
cellpy_file_dir=fdv.output_dir)
assert fdv.res_file_path in raw_files
assert os.path.basename(cellpy_file) == fdv.cellpy_file_name
def test_search_for_strange_files():
raw_files, cellpy_file = filefinder.search_for_files(
fdv.run_name,
raw_extension="STRANGE-FILE-THAT-DOES-NOT-EXIST",
cellpy_file_extension=None,
raw_file_dir=fdv.raw_data_dir,
cellpy_file_dir=fdv.output_dir,
prm_filename=None,
file_name_format=None,
cache=None,
)
assert len(raw_files) == 0
def test_search_for_res_files():
raw_files, cellpy_file = filefinder.search_for_files(
fdv.run_name,
raw_extension="res",
cellpy_file_extension=None,
raw_file_dir=fdv.raw_data_dir,
cellpy_file_dir=fdv.output_dir,
prm_filename=None,
file_name_format=None,
cache=None,
)
assert fdv.res_file_path in raw_files
def test_search_for_files_using_custom_prms_file():
# this is not enabled
raw_files, cellpy_file = filefinder.search_for_files(
fdv.run_name,
prm_filename=fdv.default_prm_file,
)
def test_search_for_files_default_dirs():
raw_files, cellpy_file = filefinder.search_for_files(fdv.run_name, )
assert fdv.res_file_path in raw_files
