def _length_aware_softmax(e, l0, l1, xp):
# e: (B, T0, T1)
bs, t0, t1 = e.shape
l0 = l0.reshape((bs, 1, 1))
l1 = l1.reshape((bs, 1, 1))
mask0 = (xp.tile(xp.arange(t0).reshape(1, t0, 1),
(bs, 1, 1)) < l0).astype(e.dtype)
mask1 = (xp.tile(xp.arange(t1).reshape(1, t1, 1),
(bs, 1, 1)) < l1).astype(e.dtype)
mask = (xp.matmul(mask0, mask1.swapaxes(1, 2))).astype(np.bool)
# mask: (B, T0, T1)
mask = chainer.Variable(mask)
padding = chainer.Variable(xp.zeros(e.shape, dtype=e.dtype))
e_max = F.max(e, keepdims=True)
e_masked = F.where(mask, e, padding)
e_masked = e_masked - F.broadcast_to(e_max, e.shape)
e_sum0 = F.reshape(F.logsumexp(e_masked, axis=1), (bs, 1, t1))
e_sum1 = F.reshape(F.logsumexp(e_masked, axis=2), (bs, t0, 1))
s1 = F.exp(e_masked - F.broadcast_to(e_sum0, e.shape))
s2 = F.exp(e_masked - F.broadcast_to(e_sum1, e.shape))
s1 = F.where(mask, s1, padding)
s2 = F.where(mask, s2, padding)
return s1, s2
def compute_discriminator_loss(self, image_real, image_fake, image_labeled,
label):
# predict
prediction_real = self.discriminator(image_real)
prediction_fake = self.discriminator(image_fake)
prediction_labeled = self.discriminator(image_labeled)
# discriminator loss
prediction_real_lse = cf.logsumexp(prediction_real, axis=1)
prediction_fake_lse = cf.logsumexp(prediction_fake, axis=1)
loss_discriminator = (
0.5 * cf.sum(cf.softplus(prediction_real_lse)) /
prediction_real_lse.size +
0.5 * cf.sum(-prediction_real_lse) / prediction_real_lse.size +
0.5 * cf.sum(cf.softplus(prediction_fake_lse)) /
prediction_fake_lse.size)
# classifier loss
loss_classifier = cf.softmax_cross_entropy(prediction_labeled, label)
loss = loss_discriminator + loss_classifier
chainer.reporter.report(
{
'loss_discriminator': loss_discriminator,
'loss_classifier': loss_classifier
}, self)
return loss
def update_core(self):
gen_optimizer = self.get_optimizer('gen')
dis_optimizer = self.get_optimizer('dis')
label_batch = self.get_iterator('labeled').next()
x_labeled, true_label = zip(*label_batch)
x_labeled = self.xp.asarray(x_labeled).astype("f")
true_label = self.xp.asarray(true_label).astype("i")
unlabel_batch = self.get_iterator("unlabeled").next()
batchsize = len(unlabel_batch)
x_unlabeled = self.xp.asarray(unlabel_batch).astype("f")
y_with_label = self.dis(x_labeled)
y_with_unlabel = self.dis(x_unlabeled)
# real_feature = self.dis.feature.data
z = self.gen.make_hidden(batchsize)
x_fake = self.gen(z)
y_fake = self.dis(x_fake)
# fake_feature = self.dis.feature
log_sum_y_fake = F.logsumexp(y_fake, axis=1)
# loss_gen = F.mean(F.softplus(log_sum_y_fake))
loss_gen_softplus = F.softplus(log_sum_y_fake)
loss_gen = -F.mean(log_sum_y_fake - loss_gen_softplus)
# loss_feature = F.mean_squared_error(fake_feature, real_feature)
self.gen.cleargrads()
loss_gen.backward()
# loss_feature.backward()
gen_optimizer.update()
chainer.reporter.report({'gen/loss': loss_gen})
# chainer.reporter.report({'gen/loss_f': loss_feature})
log_sum_y_real = F.logsumexp(y_with_unlabel, axis=1)
loss_classify = self.loss_label(y_with_label, true_label)
loss_unlabel = log_sum_y_real - F.softplus(log_sum_y_real)
z = self.gen.make_hidden(batchsize)
x_fake = self.gen(z)
y_fake = self.dis(x_fake.data)
loss_from_gen = F.logsumexp(y_fake, axis=1)
loss_from_gen = F.softplus(loss_from_gen)
loss_dis = F.mean(-loss_unlabel + loss_from_gen)
self.dis.cleargrads()
loss_dis.backward()
loss_classify.backward()
dis_optimizer.update()
chainer.reporter.report({'dis/loss': loss_dis})
def __call__(self, x):
batchsize = x.shape[0]
iwae = IWAEObjective(self.encode, self.decode, self.num_zsamples)
logw = iwae.compute_logw(x) # (num_zsamples,batchsize)
obj_elbo = -iwae.compute_elbo(logw)
M = self.logB.shape[1] # number of subsets
n = self.num_zsamples
# (n,M,batchsize)
logw = F.broadcast_to(F.reshape(logw, (n, 1, batchsize)),
(n, M, batchsize))
logB = F.broadcast_to(F.reshape(self.logB, (n, M, 1)),
(n, M, batchsize))
R = F.logsumexp(logw + logB, axis=0) # (M,batchsize)
logp = F.matmul(self.A, R, transa=True) # (batchsize,)
obj_c = logp - F.broadcast_to(F.mean(logp), logp.shape)
obj_var = F.sum(obj_c * obj_c) / (batchsize - 1)
obj = -F.mean(logp)
reporter.report({
'obj': obj,
'obj_var': obj_var,
'obj_elbo': obj_elbo
}, self)
return obj
def angular_mc_loss(f, f_p, alpha=45, in_degree=True):
'''
Args:
f (chainer.Variable or xp.npdarray):
Anchor vectors. Each vectors in f must be l2 normalized.
f_p (chainer.Variable or xp.npdarray):
Positive vectors. Each vectors in f must be l2 normalized.
'''
xp = cuda.get_array_module(f)
if in_degree:
alpha = np.deg2rad(alpha)
sq_tan_alpha = np.tan(alpha)**2
n_pairs = len(f)
# first and second term of f_{a,p,n}
term1 = 4 * sq_tan_alpha + matmul(f + f_p, transpose(f_p))
term2 = 2 * (1 + sq_tan_alpha) * F.sum(f * f_p, axis=1, keepdims=True)
# term2 = 2 * (1 + sq_tan_alpha) * F.batch_matmul(f, f_p, transa=True).reshape(n_pairs, 1)
f_apn = term1 - F.broadcast_to(term2, (n_pairs, n_pairs))
# multiply zero to diagonal components of f_apn
mask = xp.ones_like(f_apn.data) - xp.eye(n_pairs, dtype=f.dtype)
f_apn = f_apn * mask
return F.average(F.logsumexp(f_apn, axis=1))
def check_forward(self, x_data, axis=None):
x = chainer.Variable(x_data)
y = functions.logsumexp(x, axis=axis)
self.assertEqual(y.data.dtype, self.dtype)
y_expect = numpy.log(numpy.exp(self.x).sum(axis=axis))
gradient_check.assert_allclose(
y_expect, y.data, **self.check_forward_option)
def check_forward(self, x_data, axis=None):
x = chainer.Variable(x_data)
y = functions.logsumexp(x, axis=axis)
self.assertEqual(y.data.dtype, self.dtype)
y_expect = numpy.log(numpy.exp(self.x).sum(axis=axis))
testing.assert_allclose(
y_expect, y.data, **self.check_forward_option)
def proxy_nca_loss(x, proxy, labels):
"""Proxy-NCA loss function.
Args:
x (:class:`~chainer.Variable`):
L2 normalized anchor points whose shape is (B, D), where B is the
batch size and D is the number of dimensions of feature vector.
proxy (:class:`~chainer.Variable` or :class:`~chainer.Parameter`):
Proxies whose shape is (K, D), where K is the number of classes
in the dataset.
labels (:class:`numpy.ndarray`):
Class labels associated to x. The shape is (B,) and dtype is int.
Note that the class IDs must be 0, 1, ..., K-1.
Returns:
:class:`~chainer.Variable`: Loss value.
See: `No Fuss Distance Metric Learning using Proxies \
<http://openaccess.thecvf.com/content_ICCV_2017/papers/\
Movshovitz-Attias_No_Fuss_Distance_ICCV_2017_paper.pdf>`_
"""
proxy = F.normalize(proxy)
distance = squared_distance_matrix(x, proxy)
d_posi = distance[np.arange(len(x)), labels]
# For each row, remove one element corresponding to the positive distance
B, K = distance.shape # batch size and the number of classes
mask = np.tile(np.arange(K), (B, 1)) != labels[:, None]
d_nega = distance[mask].reshape(B, K - 1)
log_denominator = F.logsumexp(-d_nega, axis=1)
loss = d_posi + log_denominator
return F.average(loss)
def calculate_gaussian_loss(self, y, t):
xp = chainer.cuda.get_array_module(t)
if xp != numpy:
xp.cuda.Device(t.device).use()
nr_mix = y.shape[1] // 3
logits = y[:, :nr_mix]
means = y[:, nr_mix:2 * nr_mix]
log_scales = y[:, 2 * nr_mix:3 * nr_mix]
log_scales = F.maximum(
log_scales, self.scalar_to_tensor(log_scales, self.log_scale_min))
t = F.broadcast_to(t, means.shape)
ditstribution = chainer.distributions.Normal(
means, log_scale=log_scales)
cdf_plus = ditstribution.cdf(t + 1 / (self.quantize - 1))
cdf_min = ditstribution.cdf(t - 1 / (self.quantize - 1))
probs = cdf_plus - cdf_min
probs = F.maximum(probs, self.scalar_to_tensor(probs, 1e-12))
if nr_mix == 1:
loss = -F.mean(F.log(probs))
else:
log_probs = F.log_softmax(logits) + F.log(probs)
loss = -F.mean(F.logsumexp(log_probs, axis=1))
return loss
def _elementwise_softmax_cross_entropy(x, t):
assert x.shape[:-1] == t.shape
p = F.reshape(F.select_item(F.reshape(x, (-1, x.shape[-1])), F.flatten(t)),
t.shape)
return F.logsumexp(x, axis=-1) - p
def check_double_backward(self, x_data, y_grad, x_grad_grad, axis=None):
gradient_check.check_double_backward(
lambda x: functions.logsumexp(x, axis),
x_data,
y_grad,
x_grad_grad,
dtype=numpy.float64,
**self.check_double_backward_option)
def compute(self, observations):
q_values = self.q_model(observations)
values_out = F.expand_dims(self._tau *
F.logsumexp(q_values / self._tau, axis=1),
axis=1)
values = F.broadcast_to(values_out, q_values.shape)
pi_out = (q_values - values) / self._tau
return pi_out, values_out
def __call__(self, x):
# Obtain parameters for q(z|x)
encoding_time = time.time()
self.encode(x)
encoding_time = float(time.time() - encoding_time)
decoding_time_average = 0.
xp = cuda.cupy
self.importance_weights = 0
self.w_holder = []
self.kl = 0
self.logp = 0
for j in xrange(self.num_zsamples):
# Sample z ~ q(z|x)
z = F.gaussian(self.qmu, self.qln_var)
# Compute log q(z|x)
encoder_log = gaussian_logp(z, self.qmu, self.qln_var)
# Obtain parameters for p(x|z)
decoding_time = time.time()
self.decode(z)
decoding_time = time.time() - decoding_time
decoding_time_average += decoding_time
# Compute log p(x|z)
decoder_log = gaussian_logp(x, self.pmu, self.pln_var)
# Compute log p(z). The odd notation being used is to supply a mean of 0 and covariance of 1
prior_log = gaussian_logp(z, self.qmu*0, self.qln_var/self.qln_var)
# Store the latest log weight'
current_temperature = min(self.temperature['value'],1.0)
self.w_holder.append(decoder_log + current_temperature*(prior_log - encoder_log))
# Store the KL and Logp equivalents. They are not used for computation but for recording and reporting.
self.kl += (encoder_log-prior_log)
self.logp += (decoder_log)
self.temperature['value'] += self.temperature['increment']
# Compute w' for this sample (batch)
logps = F.stack(self.w_holder)
self.obj_batch = F.logsumexp(logps, axis=0) - np.log(self.num_zsamples)
self.kl /= self.num_zsamples
self.logp /= self.num_zsamples
decoding_time_average /= self.num_zsamples
batch_size = self.obj_batch.shape[0]
self.obj = -F.sum(self.obj_batch)/batch_size
self.timing_info = np.array([encoding_time,decoding_time_average])
return self.obj
def process_batch(self,
x,
y,
one_hot,
last_joint,
return_sample=False,
return_mean=True):
xp = cuda.cupy
x = F.dropout(x, ratio=0.5)
x = F.concat((one_hot, x), axis=-1)
x = self.ln1_(x)
h0 = self.l1_(x)
h = F.dropout(h0, ratio=0.5)
h1 = self.ln2_(F.concat((x, h), axis=1))
h1 = self.l2_(h1)
h = F.dropout(h1, ratio=0.5)
h2 = self.ln3_(F.concat((x, h), axis=1))
h2 = self.l3_(h2)
final_h = F.concat((h0, h1, h2), axis=-1)
mu = self.mu_(final_h)
mu = F.reshape(mu, (-1, self.future_out_dim, self.NUM_MIXTURE))
sigma_orig = self.sigma_(final_h)
mixing_orig = self.mixing_(final_h)
sigma = F.softplus(sigma_orig)
mixing = F.softmax(mixing_orig)
y = F.expand_dims(y, axis=2)
y_broad = F.broadcast_to(y, mu.shape)
normalizer = 2 * np.pi * sigma
exponent = -0.5 * (1. / F.square(sigma)) * F.sum(
(y_broad - mu)**2, axis=1) + F.log(
mixing) - (self.future_out_dim * 0.5) * F.log(normalizer)
cost = -F.logsumexp(exponent, axis=1)
cost = F.mean(cost)
#sampling
if return_sample:
mixing = mixing_orig * (1 + self.sampling_bias)
sigma = F.softplus(sigma_orig - self.sampling_bias)
mixing = F.softmax(mixing)
argmax_mixing = F.argmax(mixing, axis=1)
mixing_one_hot = xp.zeros(mixing.shape, dtype=xp.float32)
mixing_one_hot[xp.arange(mixing.shape[0]), argmax_mixing.data] = 1
component_expanded = F.broadcast_to(
F.expand_dims(mixing_one_hot, axis=1), mu.shape)
component_mean = F.sum(mu * component_expanded, axis=2)
if return_mean:
return cost, component_mean
component_std = F.sum(sigma * component, axis=2, keepdims=True)
component_std = F.broadcast_to(component_std, component_mean.shape)
sample = xp.random.normal(component_mean.data, component_std.data)
return cost, sample
return cost, None
def log_Z(self, x, y):
A0 = self.unary_potential(
x, Variable(-np.ones_like(x.data, dtype=np.float32)))
I0 = self.site_I(x, y, -1)
A1 = self.unary_potential(
x, Variable(np.ones_like(x.data, dtype=np.float32)))
I1 = self.site_I(x, y, 1)
return F.logsumexp(F.concat((A0 + I0, A1 + I1), axis=0), axis=0)
def mixture_of_discretized_logistics_nll(x, y):
"""
Args:
x: (b, c, n, n)
y: (b, 10*n_mix, n, n)
"""
xp = get_array_module(x)
n_mix = y.shape[1] // 10
logit_prob = y[:, :n_mix, :, :]
y = F.reshape(y[:, n_mix:, :, :], x.shape + (n_mix * 3, ))
mean = y[:, :, :, :, 0:n_mix]
log_scale = y[:, :, :, :, n_mix:2 * n_mix]
log_scale = F.maximum(log_scale, -7 * xp.ones(log_scale.shape, dtype='f'))
coeff = F.tanh(y[:, :, :, :, 2 * n_mix:3 * n_mix])
x = xp.repeat(xp.expand_dims(x, 4), n_mix, 4)
m1 = F.expand_dims(mean[:, 0, :, :, :], 1)
m2 = F.expand_dims(
mean[:, 1, :, :, :] + coeff[:, 0, :, :, :] * x[:, 0, :, :, :], 1)
m3 = F.expand_dims(
(mean[:, 2, :, :, :] + coeff[:, 1, :, :, :] * x[:, 0, :, :, :] +
coeff[:, 2, :, :, :] * x[:, 1, :, :, :]), 1)
mean = F.concat([m1, m2, m3])
centered_x = x - mean
inv_std = F.exp(-log_scale)
max_in = inv_std * (centered_x + 1. / 255.)
cdf_max = F.sigmoid(max_in)
min_in = inv_std * (centered_x - 1. / 255.)
cdf_min = F.sigmoid(min_in)
log_cdf_max = max_in - F.softplus(max_in) # 0
log_one_minus_cdf_min = -F.softplus(min_in) # 255
cdf_delta = cdf_max - cdf_min # 0 ~ 255
mid_in = inv_std * centered_x
log_pdf_mid = mid_in - log_scale - 2. * F.softplus(mid_in) # mid
log_prob = F.where(
x < -0.999, log_cdf_max,
F.where(
x > 0.999, log_one_minus_cdf_min,
F.where(
cdf_delta.array > 1e-5,
F.log(
F.maximum(cdf_delta,
xp.ones(cdf_delta.shape, dtype='f') * 1e-12)),
log_pdf_mid - xp.log(127.5))))
log_prob = F.transpose(F.sum(log_prob, 1), (0, 3, 1, 2))
log_prob = log_prob + log_prob_from_logit(logit_prob)
loss = F.logsumexp(log_prob, 1)
loss = F.sum(loss, axis=(1, 2))
return -F.mean(loss)
def _instantaneousLoss(self, proj_array, input_labels, ind):
""" Instantaneous MI estimate between projected features and labels based on non-parametric density estimates
INPUT:
proj_array - Variable of projected features array [num_trials x output_dim]
input_labels - input feature labels array [num_trials x 1]
ind - index of the instantaneous feature for mutual information estimation
OUTPUT:
Variable of negated instantaneous mutual information
"""
# Empirical class prior estimates
num_classes = np.max(input_labels) + 1
num_samples = len(input_labels) - 1
obs_labels = [np.where(np.delete(input_labels, ind) == c)[0] for c in range(num_classes)]
priors = [len(obs_labels[c]) / num_samples for c in range(num_classes)]
# Class conditional kernel density estimate value components
constants, energies, lse_energies = [], [], []
for c in range(num_classes):
const, energy = self._kdeparts(proj_array[obs_labels[c]], proj_array[ind])
constants.append(const)
energies.append(energy)
lse_energies.append(F.logsumexp(energy).data)
# Use the maximum logsumexp(energy) across classes for the exp-normalize trick
max_index = lse_energies.index(max(lse_energies))
joint_prob = [priors[c] * constants[c] * F.exp(F.logsumexp(energies[c]) - F.logsumexp(energies[max_index])) for c in range(num_classes)]
# Calculate entropy and conditional entropy for the stochastic MI estimate
conditional_entropy_parts = []
entropy_parts = []
for c in range(num_classes):
c_given_y = joint_prob[c] / sum(joint_prob)
conditional_entropy_parts.append(c_given_y * (F.log(constants[c]) + F.logsumexp(energies[c])))
entropy_parts.append(priors[c] * constants[c] * F.exp(F.logsumexp(energies[c])))
conditional_entropy = sum(conditional_entropy_parts)
entropy = F.log(sum(entropy_parts))
return entropy - conditional_entropy
def __call__(self, x, y):
h = self.l1_(x)
# h2 = self.l2_(h1)
# return F.mean_squared_error(h2, y)
sigma = F.softplus(self.sigma_(h))
mixing = F.softmax(self.mixing_(h))
mu = F.reshape(self.mu_(h), (-1, self.OUT_DIM, self.NUM_MIXTURE))
mu, y = F.broadcast(mu, F.reshape(y, (-1, self.OUT_DIM, 1)))
exponent = -0.5 * (1. / sigma) * F.sum((y - mu)**2, axis=1)
normalizer = 2 * np.pi * sigma
exponent = exponent + F.log(mixing) - (self.OUT_DIM *
.5) * F.log(normalizer)
cost = -F.logsumexp(exponent)
return cost
def get_elbo(self, x, k=None, with_ll=False):
if not k:
k = self.k
q_z = self.encoder(x)
z = q_z.sample(k)
p_x = self.decoder(z, n_batch_axes=2)
p_z = self.prior()
reconstr = p_x.log_prob(F.broadcast_to(x[None, :], (k, ) + x.shape))
kl_penalty = q_z.log_prob(z) - p_z.log_prob(z)
elbo_k = reconstr - kl_penalty
elbo = F.mean(elbo_k)
if with_ll:
log_likelihood = F.mean(F.logsumexp(elbo_k, axis=0) - numpy.log(k))
return elbo, log_likelihood
else:
return elbo
def __call__(self, x):
batchsize = x.shape[0]
iwae = IWAEObjective(self.encode, self.decode, self.num_zsamples)
logw = iwae.compute_logw(x) # (num_zsamples,batchsize)
obj_elbo = -iwae.compute_elbo(logw)
# Jackknife bias corrected logp estimate
A = F.logsumexp(logw, axis=0)
logp_iwae = A - math.log(self.num_zsamples)
logp_iwae = F.sum(logp_iwae) / batchsize
k = float(self.num_zsamples)
wnorm = F.exp(logw - F.broadcast_to(A, logw.shape))
#wmax = F.max(wnorm)
#print wmax
#ess = F.sum(1.0 / F.sum(wnorm*wnorm, axis=0)) / batchsize
#B = F.sum(F.log1p(-F.exp(logw - F.broadcast_to(A, logw.shape))), axis=0)
#print logw
B = F.sum(numfun.log1mexp(logw - F.broadcast_to(A, logw.shape) -
1.0e-6),
axis=0)
#print B
logp_jk = A - (
(k - 1) / k) * B - k * math.log(k) + (k - 1) * math.log(k - 1)
logp_jk_mean = F.sum(logp_jk) / batchsize
obj = -logp_jk_mean
correction = logp_jk_mean - logp_iwae
# Variance computation
obj_c = logp_jk - F.broadcast_to(logp_jk_mean, logp_jk.shape)
obj_var = F.sum(obj_c * obj_c) / (batchsize - 1)
reporter.report(
{
'obj': obj,
'obj_var': obj_var,
'obj_elbo': obj_elbo,
'corr': correction
}, self)
return obj
def ais(decoder,
X,
M=32,
T=100,
steps=10,
stepsize=0.1,
sigma=1.0,
encoder=None):
xp = cupy.get_array_module(X)
batchsize = X.shape[0] # number of samples in X
nz = decoder.nz # number of latent dimensions
# Sample initial z and initialize log weights
if encoder == None:
print "Using p(z)"
zprior = ZPrior(nz)
else:
print "Using q(z|x)"
zprior = ZEncoder(encoder, X)
Z = zprior.sample(X, M)
#logw = xp.zeros((M*batchsize,))
logw = zprior.initial_logw(X, Z)
for t in xrange(2, T + 1):
efun_cur = EnergyFunction(zprior, decoder, X, ais_beta_sigmoid(t, T))
efun_prev = EnergyFunction(zprior, decoder, X,
ais_beta_sigmoid(t - 1, T))
accept_rate = leapfrog(efun_cur,
Z,
n=steps,
leapfrog_eps=stepsize,
moment_sigma=sigma)
if t % 100 == 0:
print "AIS t=%d accept rate %.3f" % (t, accept_rate)
logw += efun_prev(Z).data - efun_cur(Z).data
logw = F.reshape(logw, (M, batchsize))
logZ = F.logsumexp(logw, axis=0) - math.log(M)
return logZ
def mellowmax(values, omega=1., axis=1):
"""Mellowmax function.
This is a kind of softmax function that is, unlike the Boltzmann softmax,
non-expansion.
See: http://arxiv.org/abs/1612.05628
Args:
values (Variable or ndarray):
Input values. Mellowmax is taken along the second axis.
omega (float):
Parameter of mellowmax.
axis (int):
Axis along which mellowmax is taken.
Returns:
outputs (Variable)
"""
n = values.shape[axis]
return (F.logsumexp(omega * values, axis=axis) - np.log(n)) / omega
def loss(self, x_loc, x_conf, t_loc, t_conf):
xp = cuda.get_array_module(x_loc.data)
pos = (t_conf.data > 0).flatten()
if xp.logical_not(pos).all():
return 0, 0
x_loc = F.reshape(x_loc, (-1, 4))
t_loc = F.reshape(t_loc, (-1, 4))
loss_loc = F.huber_loss(x_loc, t_loc, 1)
loss_loc = F.where(pos, loss_loc, xp.zeros_like(loss_loc.data))
loss_loc = F.sum(loss_loc) / pos.sum()
hard_neg = self.mine_hard_negative(x_conf, t_conf).flatten()
x_conf = F.reshape(x_conf, (-1, self.n_class + 1))
t_conf = F.flatten(t_conf)
loss_conf = F.logsumexp(x_conf, axis=1) - F.select_item(x_conf, t_conf)
loss_conf = F.where(xp.logical_or(pos, hard_neg), loss_conf,
xp.zeros_like(loss_conf.data))
loss_conf = F.sum(loss_conf) / pos.sum()
return loss_loc, loss_conf
def get_loss(self, x_t, y_t):
x_t = Variable(x_t)
y_t = Variable(y_t)
y_t = F.reshape(y_t, (1, y_t.shape[0]))
# normalize output score to avoid divergence
y_t = F.normalize(y_t)
self.model.zerograds()
pred = self.model(x_t)
# ---- start loss calculation ----
pred = F.reshape(pred, (pred.shape[1], pred.shape[0]))
p_true = F.softmax(F.reshape(y_t, (y_t.shape[0], y_t.shape[1])))
xm = F.max(pred, axis=1, keepdims=True)
logsumexp = F.logsumexp(pred, axis=1)
#xm_broadcast = F.broadcast_to(xm,(xm.shape[0],pred.shape[1]))
#logsumexp = F.reshape(xm,(xm.shape[0],)) + F.log(F.sum(F.exp(pred-xm_broadcast),axis=1))
logsumexp = F.broadcast_to(logsumexp, (xm.shape[0], pred.shape[1]))
loss = -1 * F.sum(p_true * (pred - logsumexp))
trainres = ndcg(y_t.data, pred.data, self.n_thres_cand) #,nthres)
if np.isnan(trainres):
print y_t.data.max(), y_t.data.min()
return loss, trainres
def __call__(self, x):
# Compute q(z|x)
qmu, qln_var = self.encode(x)
batchsize = qmu.data.shape[0]
# Perform unnormalized importance sampling
logw = list()
logpxz = list()
for i in xrange(self.num_zsamples):
# z ~ q(z|x)
z = F.gaussian(qmu, qln_var)
logqz = gaussian_logp_inst(z, qmu, qln_var)
logpz = gaussian_logp01_inst(z)
# Compute p(x|z)
pxz = self.decode(z)
logpxz_i = pxz(x)
logpxz.append(logpxz_i)
logw_i = logpz + logpxz_i - logqz
logw.append(logw_i)
# Self-normalize importance weights
logw = F.stack(logw) # (num_zsamples,batchsize)
lse = F.logsumexp(logw, axis=0)
logw -= F.broadcast_to(lse, logw.shape)
w = F.exp(logw)
# Compute effective sample size
ess = F.sum(1.0 / F.sum(w * w, axis=0)) / batchsize
logpxz = F.stack(logpxz) # (num_zsamples,batchsize)
# XXX: break dependency in computational graph
w = chainer.Variable(w.data)
obj = -F.sum(w * logpxz) / batchsize
reporter.report({'obj': obj, 'ess': ess}, self)
return obj
def __call__(self, x):
batchsize = x.shape[0]
logw = self.compute_logw(x)
# IWAE = log (1/k) sum_i w_i
logp = F.logsumexp(logw, axis=0) - math.log(self.num_zsamples)
logp_mean = F.sum(logp) / batchsize
obj = -logp_mean
# Variance computation
obj_c = logp - F.broadcast_to(logp_mean, logp.shape)
obj_var = F.sum(obj_c * obj_c) / (batchsize - 1)
obj_elbo = -self.compute_elbo(logw)
reporter.report({
'obj': obj,
'obj_var': obj_var,
'obj_elbo': obj_elbo
}, self)
return obj
def forward(self, inputs, device):
x, = inputs
return functions.logsumexp(x, axis=self.axis),
def test_invalid_axis_type(self):
with self.assertRaises(TypeError):
functions.logsumexp(self.x, [0])
def check_backward(self, x_data, y_grad, axis=None):
gradient_check.check_backward(
lambda x: functions.logsumexp(x, axis), x_data, y_grad,
**self.check_backward_option)
def test_invalid_axis_type_in_tuple(self):
with self.assertRaises(TypeError):
functions.logsumexp(self.x, (1, 'x'))
def train(self,
states,
actions,
action_logprobs,
next_states,
targets,
xp,
gamma=1):
"""
Return the loss function of the discriminator to be optimized.
As in discriminator, we only want to discriminate the expert from
learner, thus this is a binary classification problem.
Unlike Discriminator used for GAIL, the discriminator in this class
take a specific form, where
exp{f(s, a)}
D(s,a) = -------------------------
exp{f(s, a)} + \pi(a|s)
"""
# Create state-action pairs. Remember that both the agent's and the expert's s-a pairs are in the same list
state_action = []
for state, action in zip(states, actions):
action = np.array([0, 1]) if action == 0 else np.array([0, 1])
array = np.append(state, action)
state_action.append(array.reshape((-1, 1)))
# Get rewards for all s-a pairs
rewards = self.reward_net(
xp.asarray([s_a.T.astype('float32') for s_a in state_action])).data
# Get values for current states
current_values = self.value_net(
xp.asarray([s.T.astype('float32') for s in states])).data
# get values for next states
next_values = self.value_net(
xp.asarray([s.T.astype('float32') for s in next_states])).data
# Define log p_tau(a|s) = r + gamma * V(s') - V(s)
log_p_tau = rewards + gamma * next_values - current_values
# log_q_tau = logprobs(pi(s)) = logprobs(a) calculated by policy net given a state
# action_logprobs contains probs for both expert and agent
log_q_tau = action_logprobs.reshape((-1, 1))
# Concatenate the rewards from discriminator and action probs from policy net to compute sum
# After concatenation, log_pq should have size N * 2
log_pq = np.concatenate((log_p_tau, log_q_tau), axis=1)
# logsumexp = softmax, i.e. for each row we take log(sum(exp(val))) so that we add together probabilities
# and then go back to logprobs
log_pq = F.logsumexp(log_pq, axis=1).data.reshape((-1, 1))
# Calculate D
discrim_output = F.exp(log_p_tau - log_pq)
# Calculate cross entropy loss
loss = F.sigmoid_cross_entropy(log_p_tau - log_pq,
np.ones_like(log_p_tau).astype(np.int))
loss += F.sigmoid_cross_entropy(
log_q_tau - log_pq,
np.zeros_like(log_q_tau).astype(np.int))
#loss = targets*(log_p_tau-log_pq) + (1-targets)*(log_q_tau-log_pq) # lång körning ozzy 3/3
#loss = -F.mean(loss)
self.reward_net.cleargrads()
self.value_net.cleargrads()
self.reward_optimizer.update(loss.backward())
self.value_optimizer.update(loss.backward())
return loss
def main():
images = load_rgb_images(args.image_dir)
# config
discriminator_config = gan.config_discriminator
generator_config = gan.config_generator
# settings
max_epoch = 1000
num_updates_per_epoch = 500
batchsize_true = 128
batchsize_fake = 128
plot_interval = 5
# seed
np.random.seed(args.seed)
if args.gpu_device != -1:
cuda.cupy.random.seed(args.seed)
# init weightnorm layers
if discriminator_config.use_weightnorm:
print "initializing weight normalization layers of the discriminator ..."
x_true = sample_from_data(images, batchsize_true)
gan.discriminate(x_true)
if generator_config.use_weightnorm:
print "initializing weight normalization layers of the generator ..."
gan.generate_x(batchsize_fake)
# training
progress = Progress()
for epoch in xrange(1, max_epoch + 1):
progress.start_epoch(epoch, max_epoch)
sum_loss_unsupervised = 0
sum_loss_adversarial = 0
sum_dx_unlabeled = 0
sum_dx_generated = 0
for t in xrange(num_updates_per_epoch):
# sample data
x_true = sample_from_data(images, batchsize_true)
x_fake = gan.generate_x(batchsize_fake)
x_fake.unchain_backward()
# unsupervised loss
# D(x) = Z(x) / {Z(x) + 1}, where Z(x) = \sum_{k=1}^K exp(l_k(x))
# softplus(x) := log(1 + exp(x))
# logD(x) = logZ(x) - log(Z(x) + 1)
# = logZ(x) - log(exp(log(Z(x))) + 1)
# = logZ(x) - softplus(logZ(x))
# 1 - D(x) = 1 / {Z(x) + 1}
# log{1 - D(x)} = log1 - log(Z(x) + 1)
# = -log(exp(log(Z(x))) + 1)
# = -softplus(logZ(x))
log_zx_u, activations_u = gan.discriminate(x_true,
apply_softmax=False)
log_dx_u = log_zx_u - F.softplus(log_zx_u)
dx_u = F.sum(F.exp(log_dx_u)) / batchsize_true
loss_unsupervised = -F.sum(
log_dx_u) / batchsize_true # minimize negative logD(x)
py_x_g, _ = gan.discriminate(x_fake, apply_softmax=False)
log_zx_g = F.logsumexp(py_x_g, axis=1)
loss_unsupervised += F.sum(F.softplus(
log_zx_g)) / batchsize_true # minimize negative log{1 - D(x)}
# update discriminator
gan.backprop_discriminator(loss_unsupervised)
sum_loss_unsupervised += float(loss_unsupervised.data)
sum_dx_unlabeled += float(dx_u.data)
# generator loss
x_fake = gan.generate_x(batchsize_fake)
log_zx_g, activations_g = gan.discriminate(x_fake,
apply_softmax=False)
log_dx_g = log_zx_g - F.softplus(log_zx_g)
dx_g = F.sum(F.exp(log_dx_g)) / batchsize_fake
loss_generator = -F.sum(
log_dx_g) / batchsize_true # minimize negative logD(x)
# feature matching
if discriminator_config.use_feature_matching:
features_true = activations_u[-1]
features_true.unchain_backward()
if batchsize_true != batchsize_fake:
x_fake = gan.generate_x(batchsize_true)
_, activations_g = gan.discriminate(x_fake,
apply_softmax=False)
features_fake = activations_g[-1]
loss_generator += F.mean_squared_error(features_true,
features_fake)
# update generator
gan.backprop_generator(loss_generator)
sum_loss_adversarial += float(loss_generator.data)
sum_dx_generated += float(dx_g.data)
if t % 10 == 0:
progress.show(t, num_updates_per_epoch, {})
gan.save(args.model_dir)
progress.show(
num_updates_per_epoch, num_updates_per_epoch, {
"loss_u": sum_loss_unsupervised / num_updates_per_epoch,
"loss_g": sum_loss_adversarial / num_updates_per_epoch,
"dx_u": sum_dx_unlabeled / num_updates_per_epoch,
"dx_g": sum_dx_generated / num_updates_per_epoch,
})
if epoch % plot_interval == 0 or epoch == 1:
plot(filename="epoch_{}_time_{}min".format(
epoch, progress.get_total_time()))
def test_duplicate_axis(self):
with self.assertRaises(ValueError):
functions.logsumexp(self.x, (0, 0))
def main():
# load MNIST images
images, labels = dataset.load_train_images()
# config
discriminator_config = gan.config_discriminator
generator_config = gan.config_generator
# settings
# _l -> labeled
# _u -> unlabeled
# _g -> generated
max_epoch = 1000
num_trains_per_epoch = 500
plot_interval = 5
batchsize_l = 100
batchsize_u = 100
batchsize_g = batchsize_u
# seed
np.random.seed(args.seed)
if args.gpu_device != -1:
cuda.cupy.random.seed(args.seed)
# save validation accuracy per epoch
csv_results = []
# create semi-supervised split
num_validation_data = 10000
num_labeled_data = args.num_labeled
if batchsize_l > num_labeled_data:
batchsize_l = num_labeled_data
training_images_l, training_labels_l, training_images_u, validation_images, validation_labels = dataset.create_semisupervised(
images,
labels,
num_validation_data,
num_labeled_data,
discriminator_config.ndim_output,
seed=args.seed)
print training_labels_l
# training
progress = Progress()
for epoch in xrange(1, max_epoch):
progress.start_epoch(epoch, max_epoch)
sum_loss_supervised = 0
sum_loss_unsupervised = 0
sum_loss_adversarial = 0
sum_dx_labeled = 0
sum_dx_unlabeled = 0
sum_dx_generated = 0
gan.update_learning_rate(get_learning_rate_for_epoch(epoch))
for t in xrange(num_trains_per_epoch):
# sample from data distribution
images_l, label_onehot_l, label_ids_l = dataset.sample_labeled_data(
training_images_l,
training_labels_l,
batchsize_l,
discriminator_config.ndim_input,
discriminator_config.ndim_output,
binarize=False)
images_u = dataset.sample_unlabeled_data(
training_images_u,
batchsize_u,
discriminator_config.ndim_input,
binarize=False)
images_g = gan.generate_x(batchsize_g)
images_g.unchain_backward()
# supervised loss
py_x_l, activations_l = gan.discriminate(images_l,
apply_softmax=False)
loss_supervised = F.softmax_cross_entropy(
py_x_l, gan.to_variable(label_ids_l))
log_zx_l = F.logsumexp(py_x_l, axis=1)
log_dx_l = log_zx_l - F.softplus(log_zx_l)
dx_l = F.sum(F.exp(log_dx_l)) / batchsize_l
# unsupervised loss
# D(x) = Z(x) / {Z(x) + 1}, where Z(x) = \sum_{k=1}^K exp(l_k(x))
# softplus(x) := log(1 + exp(x))
# logD(x) = logZ(x) - log(Z(x) + 1)
# = logZ(x) - log(exp(log(Z(x))) + 1)
# = logZ(x) - softplus(logZ(x))
# 1 - D(x) = 1 / {Z(x) + 1}
# log{1 - D(x)} = log1 - log(Z(x) + 1)
# = -log(exp(log(Z(x))) + 1)
# = -softplus(logZ(x))
py_x_u, _ = gan.discriminate(images_u, apply_softmax=False)
log_zx_u = F.logsumexp(py_x_u, axis=1)
log_dx_u = log_zx_u - F.softplus(log_zx_u)
dx_u = F.sum(F.exp(log_dx_u)) / batchsize_u
loss_unsupervised = -F.sum(
log_dx_u) / batchsize_u # minimize negative logD(x)
py_x_g, _ = gan.discriminate(images_g, apply_softmax=False)
log_zx_g = F.logsumexp(py_x_g, axis=1)
loss_unsupervised += F.sum(F.softplus(
log_zx_g)) / batchsize_u # minimize negative log{1 - D(x)}
# update discriminator
gan.backprop_discriminator(loss_supervised + loss_unsupervised)
# adversarial loss
images_g = gan.generate_x(batchsize_g)
py_x_g, activations_g = gan.discriminate(images_g,
apply_softmax=False)
log_zx_g = F.logsumexp(py_x_g, axis=1)
log_dx_g = log_zx_g - F.softplus(log_zx_g)
dx_g = F.sum(F.exp(log_dx_g)) / batchsize_g
loss_adversarial = -F.sum(
log_dx_g) / batchsize_u # minimize negative logD(x)
# feature matching
if discriminator_config.use_feature_matching:
features_true = activations_l[-1]
features_true.unchain_backward()
if batchsize_l != batchsize_g:
images_g = gan.generate_x(batchsize_l)
_, activations_g = gan.discriminate(images_g,
apply_softmax=False)
features_fake = activations_g[-1]
loss_adversarial += F.mean_squared_error(
features_true, features_fake)
# update generator
gan.backprop_generator(loss_adversarial)
sum_loss_supervised += float(loss_supervised.data)
sum_loss_unsupervised += float(loss_unsupervised.data)
sum_loss_adversarial += float(loss_adversarial.data)
sum_dx_labeled += float(dx_l.data)
sum_dx_unlabeled += float(dx_u.data)
sum_dx_generated += float(dx_g.data)
if t % 10 == 0:
progress.show(t, num_trains_per_epoch, {})
gan.save(args.model_dir)
# validation
images_l, _, label_ids_l = dataset.sample_labeled_data(
validation_images,
validation_labels,
num_validation_data,
discriminator_config.ndim_input,
discriminator_config.ndim_output,
binarize=False)
images_l_segments = np.split(images_l, num_validation_data // 500)
label_ids_l_segments = np.split(label_ids_l,
num_validation_data // 500)
sum_accuracy = 0
for images_l, label_ids_l in zip(images_l_segments,
label_ids_l_segments):
y_distribution, _ = gan.discriminate(images_l,
apply_softmax=True,
test=True)
accuracy = F.accuracy(y_distribution, gan.to_variable(label_ids_l))
sum_accuracy += float(accuracy.data)
validation_accuracy = sum_accuracy / len(images_l_segments)
progress.show(
num_trains_per_epoch, num_trains_per_epoch, {
"loss_l": sum_loss_supervised / num_trains_per_epoch,
"loss_u": sum_loss_unsupervised / num_trains_per_epoch,
"loss_g": sum_loss_adversarial / num_trains_per_epoch,
"dx_l": sum_dx_labeled / num_trains_per_epoch,
"dx_u": sum_dx_unlabeled / num_trains_per_epoch,
"dx_g": sum_dx_generated / num_trains_per_epoch,
"accuracy": validation_accuracy,
})
# write accuracy to csv
csv_results.append(
[epoch, validation_accuracy,
progress.get_total_time()])
data = pd.DataFrame(csv_results)
data.columns = ["epoch", "accuracy", "min"]
data.to_csv("{}/result.csv".format(args.model_dir))
if epoch % plot_interval == 0 or epoch == 1:
plot(filename="epoch_{}_time_{}min".format(
epoch, progress.get_total_time()))
def test_pos_neg_duplicate_axis(self):
with self.assertRaises(ValueError):
functions.logsumexp(self.x, (1, -2))
def check_backward(self, x_data, y_grad, axis=None):
gradient_check.check_backward(lambda x: functions.logsumexp(x, axis),
x_data, y_grad,
**self.check_backward_option)
def check_double_backward(self, x_data, y_grad, x_grad_grad, axis=None):
gradient_check.check_double_backward(
lambda x: functions.logsumexp(x, axis), x_data, y_grad,
x_grad_grad, dtype=numpy.float64,
**self.check_double_backward_option)
def calculate_logistic_loss(self, y, t):
xp = chainer.cuda.get_array_module(t)
if xp != numpy:
xp.cuda.Device(t.device).use()
nr_mix = y.shape[1] // 3
logit_probs = y[:, :nr_mix]
means = y[:, nr_mix:2 * nr_mix]
log_scales = y[:, 2 * nr_mix:3 * nr_mix]
log_scales = F.maximum(
log_scales, self.scalar_to_tensor(log_scales, self.log_scale_min))
t = F.broadcast_to(t, means.shape)
centered_t = t - means
inv_std = F.exp(-log_scales)
plus_in = inv_std * (centered_t + 1 / (self.quantize - 1))
cdf_plus = F.sigmoid(plus_in)
min_in = inv_std * (centered_t - 1 / (self.quantize - 1))
cdf_min = F.sigmoid(min_in)
log_cdf_plus = plus_in - F.softplus(plus_in)
log_one_minus_cdf_min = -F.softplus(min_in)
cdf_delta = cdf_plus - cdf_min
# mid_in = inv_std * centered_t
# log_pdf_mid = mid_in - log_scales - 2 * F.softplus(mid_in)
log_probs = F.where(
# condition
t.array < self.scalar_to_tensor(t, -0.999),
# true
log_cdf_plus,
# false
F.where(
# condition
t.array > self.scalar_to_tensor(t, 0.999),
# true
log_one_minus_cdf_min,
# false
F.log(F.maximum(
cdf_delta, self.scalar_to_tensor(cdf_delta, 1e-12)))
# F.where(
# # condition
# cdf_delta.array > self.scalar_to_tensor(cdf_delta, 1e-5),
# # true
# F.log(F.maximum(
# cdf_delta, self.scalar_to_tensor(cdf_delta, 1e-12))),
# # false
# log_pdf_mid - self.xp.log((self.quantize - 1) / 2))
))
log_probs = log_probs + F.log_softmax(logit_probs)
loss = -F.mean(F.logsumexp(log_probs, axis=1))
return loss