def testTime():
sqlite_file = "/home/dhvani/python-sources.sqlite3"
conn = sqlite3.connect(sqlite_file)
c = conn.cursor()
print "Success Connection to database..."
c.execute(
"SELECT source FROM source_file INNER JOIN eligible_source ON source_file.hash = eligible_source.hash"
)
print "Executed SELECT..."
print "Fetching all rows..."
all_rows = c.fetchmany(size=10)[0]
print all_rows[0]
#for row in all_rows:
#row = all_rows[0]
#print row[0], str(row[1]).encode('hex')
print "Got Em..."
print "Running PyPy test..."
tokenize.tokenize(StringIO.StringIO(all_rows[0]).readline, handle_token)
toTest = checkPyPySyntax(all_rows[0])
print "DONE"
if toTest == None:
#output = ''
#print output
print "SUCCESS"
else:
print "Try again..."
def test_syntax_error(self):
toTest = checkPyPySyntax(ERROR_TEST)
self.assertTrue(isinstance(toTest[0], CompileError))
self.assertEqual(toTest[0].filename, 'toCheck.py'.encode())
self.assertEqual(toTest[0].line, 1)
self.assertEqual(toTest[0].column, None)
self.assertEqual(toTest[0].functionname, None)
self.assertEqual(toTest[0].text, 'unmatched \')\':if(true)):'.encode())
self.assertEqual(toTest[0].errorname, 'SyntaxError'.encode())
def test_syntax_error(self): toTest = checkPyPySyntax(ERROR_TEST) self.assertTrue(isinstance (toTest[0], CompileError)) self.assertEqual(toTest[0].filename, 'toCheck.py'.encode()) self.assertEqual(toTest[0].line, 1) self.assertEqual(toTest[0].column, None) self.assertEqual(toTest[0].functionname, None) self.assertEqual(toTest[0].text, 'unmatched \')\':if(true)):'.encode()) self.assertEqual(toTest[0].errorname, 'SyntaxError'.encode())
def testTime():
sqlite_file = "/home/dhvani/python-sources.sqlite3"
conn = sqlite3.connect(sqlite_file)
c = conn.cursor()
print "Success Connection to database..."
c.execute("SELECT source FROM source_file INNER JOIN eligible_source ON source_file.hash = eligible_source.hash")
print "Executed SELECT..."
print "Fetching all rows..."
all_rows = c.fetchmany(size=10)[0]
print all_rows[0]
#for row in all_rows:
#row = all_rows[0]
#print row[0], str(row[1]).encode('hex')
print "Got Em..."
print "Running PyPy test..."
toTest = checkPyPySyntax(all_rows[0])
print "DONE"
if toTest == None:
#output = ''
#print output
tokenStream = tokenize.tokenize(StringIO.StringIO(all_rows[0]).readline, handle_token)
#print all_tokens
vocabularize_tokens(all_tokens)
raw_tokens = tokenize.generate_tokens(StringIO.StringIO(all_rows[0]).readline)
raw_tokens_pass = []
# TO DO: REMOVE COMMENTS FROM SOURCE FOR MUTATIONS
# for token in raw_tokens:
# print token
# if token[0] != 53:
# raw_tokens_pass.append(list(token))
# source_code = tokenize.untokenize(raw_tokens_pass)
insertMut(all_rows[0])
print "SUCCESS"
else:
print "Try again..."
def insertTokMutS(raw_tokens, all_tokens, raw_text):
new_text = raw_text
with open('vocabulary_mutate.json') as data_file:
data = json.load(data_file)
#pprint(data)
#print "HI"
#print len(data["indexes_m"])
#print chosenToken
#print tokenize.tok_name
#insTok = Token(
out_tokens_loc = []
raw_tokens_pass = []
actual_token_len = []
orig = []
for token in all_tokens:
token_use = token
#orig.append(token_use)
actual_token_len.append(token_use)
for token in raw_tokens:
token_use = token
orig.append(token_use)
raw_tokens_pass.append(token_use)
#from py_mutations_hub import getRid
#print "OKAY"
#print len(raw_tokens_pass)
#test = getRid(raw_tokens_pass, True)
#print len(test)
#print len(actual_token_len)
#print type(radha)
num_lines = len(actual_token_len)
num_encode = len(orig)
if (num_lines % 10 == 0):
numTokensNeeded = int((num_lines / 10))
else:
numTokensNeeded = int((num_lines / 10))
insToks = []
chosens = []
#print numTokensNeeded
#print "import num"
haha = -1
radOut = 0
curr = 0
while radOut < numTokensNeeded:
#chosen = raw_tokens_pass[chosenLineInd]
chosenInd = randint(0, 84)
chosenToken = data["indexes_m"][chosenInd]
#print "RAD S"
#print radOut
#print len(chosens)
#print len(insToks)
#print "RAD O"
global new_token
new_token = []
try:
toksG = tokenize.tokenize(
StringIO.StringIO(chosenToken).readline, handle_token)
except tokenize.TokenError:
pass
#print type(toksG)
#print len(new_token)
insEdTok = new_token[0]
insTok = insEdTok
insToks.append(insTok)
#print num_lines
if radOut == (numTokensNeeded - 1):
param_start = haha
param_end = num_lines - 1
else:
param_start = radOut * 10
param_end = param_start + 9
haha = param_end
chosenLineInd = randint(param_start, param_end) #num_lines-1
#print "inds"
#print chosenLineInd
#print "stop"
#chosen = raw_tokens_pass[chosenLineInd]
chosen = actual_token_len[chosenLineInd]
#chosen = Token(tokenize.tok_name[raw_tokens_pass[chosenLineInd][0]], raw_tokens_pass[chosenLineInd][1], raw_tokens_pass[chosenLineInd][2][0], raw_tokens_pass[chosenLineInd][2][1], raw_tokens_pass[chosenLineInd][3][0], raw_tokens_pass[chosenLineInd][3][1], raw_tokens_pass[chosenLineInd][4])
chosens.append(chosen)
source_code = raw_text
#print len(source_code)
#print raw_tokens_pass[chosenLineInd][0]
#print all_tokens[chosenLineInd].value
#print num_lines - 1
#print len(raw_tokens_pass)
#print len(actual_token_len)
#print raw_tokens_pass[50][4]
#print actual_token_len[chosenLineInd].line
#print raw_text
toAddBeforeInd = source_code.index(
actual_token_len[chosenLineInd].line)
#print toAddBeforeInd
temp = source_code[toAddBeforeInd:toAddBeforeInd +
len(actual_token_len[chosenLineInd].line)]
#print temp
#print actual_token_len[chosenLineInd].value
#print "kobe"
#print raw_tokens_pass[chosenLineInd][1]
shotInd = temp.index(raw_tokens_pass[chosenLineInd][1])
change = temp.strip()
check = temp.index(change)
#print check
#print len(temp)
#print shotInd
if shotInd + 1 == len(temp):
shotInd = shotInd - 1
actual_target_ind = toAddBeforeInd + shotInd
before = source_code[:actual_target_ind +
len(raw_tokens_pass[chosenLineInd][1])]
#print "B"
#print before
after = source_code[actual_target_ind +
len(raw_tokens_pass[chosenLineInd][1]):]
#print "A"
#print after
#print raw_tokens_pass[chosenLineInd][0]
if raw_tokens_pass[chosenLineInd][0] == 53:
chosenToken = '\n' + chosenToken
if shotInd == 0:
if raw_tokens_pass[chosenLineInd][0] == 4:
new_text = before + chosenToken.encode() + after
else:
new_text = before + ' ' + chosenToken.encode() + ' ' + after
else:
if raw_tokens_pass[chosenLineInd][0] == 54:
new_text = before + chosenToken.encode() + after
elif chosenInd == data["indexes_m"].index('\n'):
#print "shiz"
if after[0] == ' ':
space = ' ' * (check - 1)
else:
space = ' ' * (check)
new_text = before + chosenToken.encode() + space + after
else:
new_text = before + ' ' + chosenToken.encode() + ' ' + after
toTest = checkPyPySyntax(new_text)
print radOut
if toTest == None:
#print radOut
#if radOut != 0:
# radOut = radOut-1
#else:
# radOut = 0
#print radOut
curr = curr + 1
if curr > 10:
radOut = radOut + 1
else:
radOut = radOut
insToks.remove(insTok)
chosens.remove(chosen)
#print "test_t"
else:
curr = 0
radOut = radOut + 1
'''
print "Overthink"
print len(orig)
print numTokensNeeded
print len(insToks)
print insToks[0].value
print len(chosens)
print chosens[0].value
print "relax"
'''
#print NAH
#print "NAH"
#print ".___."
#print len(chosens)
#print len(insToks)
#print "NAH"
return new_text, NO_TOKEN, INSERTION, out_tokens_loc, chosens, insToks
def insertTokMut(raw_tokens, raw_text):
with open('vocabulary_mutate.json') as data_file:
data = json.load(data_file)
#pprint(data)
#print "HI"
#print len(data["indexes_m"])
#print chosenToken
#print tokenize.tok_name
#insTok = Token(
out_tokens_loc = []
raw_tokens_pass = []
orig = []
for token in raw_tokens:
token_use = token
orig.append(token_use)
if token[0] != 5:
if token[0] != 6:
if token[0] != 4:
if token[0] != 0:
raw_tokens_pass.append(token_use)
#print token
#print "OKAY"
num_lines = len(raw_tokens_pass)
num_encode = len(orig)
numTokensNeeded = int((num_lines / 10)) + 1
insToks = []
chosens = []
#print numTokensNeeded
#print "import num"
for rad in range(numTokensNeeded):
#chosen = raw_tokens_pass[chosenLineInd]
chosenInd = randint(0, 84)
chosenToken = data["indexes_m"][chosenInd]
global new_token
new_token = []
try:
toksG = tokenize.tokenize(
StringIO.StringIO(chosenToken).readline, handle_token)
except tokenize.TokenError:
pass
#print type(toksG)
#print len(new_token)
insEdTok = new_token[0]
insTok = insEdTok
insToks.append(insTok)
#print num_lines
if rad == (numTokensNeeded - 1):
param_start = param_end
param_end = num_lines - 1
else:
param_start = rad * 10
param_end = param_start + 9
chosenLineInd = randint(param_start, param_end) #num_lines-1
#print "inds"
#print chosenLineInd
#print "stop"
chosen = Token(tokenize.tok_name[raw_tokens_pass[chosenLineInd][0]],
raw_tokens_pass[chosenLineInd][1],
raw_tokens_pass[chosenLineInd][2][0],
raw_tokens_pass[chosenLineInd][2][1],
raw_tokens_pass[chosenLineInd][3][0],
raw_tokens_pass[chosenLineInd][3][1],
raw_tokens_pass[chosenLineInd][4])
chosens.append(chosen)
'''
print "Overthink"
print len(orig)
print numTokensNeeded
print len(insToks)
print insToks[0].value
print len(chosens)
print chosens[0].value
print "relax"
'''
#print NAH
#print "NAH"
chosenTrueLineInd = -1
indI = 0
for x in orig:
if raw_tokens_pass[chosenLineInd] == x:
#print "<3"
chosenTrueLineInd = indI
break
indI = indI + 1
#print chosenTrueLineInd
toIter = num_encode + (num_encode + 1)
for _ in range(toIter):
out_tokens_loc.extend('0')
lenD = len(out_tokens_loc)
for indI in range(toIter):
indLook = ((chosenTrueLineInd) * 2) + 1
if indI == indLook + 1:
out_tokens_loc[indI] = ('1')
source_code = raw_text
#print len(source_code)
#print raw_tokens_pass[chosenLineInd][0]
#print raw_tokens_pass[chosenLineInd][4]
#print raw_text
toAddBeforeInd = source_code.index(raw_tokens_pass[chosenLineInd][4])
temp = source_code[toAddBeforeInd:toAddBeforeInd +
len(raw_tokens_pass[chosenLineInd][4])]
#print temp
#print "kobe"
#print raw_tokens_pass[chosenLineInd][1]
shotInd = temp.index(raw_tokens_pass[chosenLineInd][1])
change = temp.strip()
check = temp.index(change)
#print check
#print len(temp)
#print shotInd
if shotInd + 1 == len(temp):
shotInd = shotInd - 1
actual_target_ind = toAddBeforeInd + shotInd
before = source_code[:actual_target_ind +
len(raw_tokens_pass[chosenLineInd][1])]
#print "B"
#print before
after = source_code[actual_target_ind +
len(raw_tokens_pass[chosenLineInd][1]):]
#print "A"
#print after
#print raw_tokens_pass[chosenLineInd][0]
if shotInd == 0:
if raw_tokens_pass[chosenLineInd][0] == 4:
new_text = before + chosenToken.encode() + after
else:
new_text = before + ' ' + chosenToken.encode() + ' ' + after
else:
if raw_tokens_pass[chosenLineInd][0] == 54:
new_text = before + chosenToken.encode() + after
elif chosenInd == data["indexes_m"].index('\n'):
#print "shiz"
if after[0] == ' ':
space = ' ' * (check - 1)
else:
space = ' ' * (check)
new_text = before + chosenToken.encode() + space + after
else:
new_text = before + ' ' + chosenToken.encode() + ' ' + after
toTest = checkPyPySyntax(new_text)
if toTest == None:
print rad
rad = rad - 1
print rad
insToks.remove(insTok)
chosens.remove(chosen)
print "test_t"
#print '------------------------------------'
#print new_text
toTest = checkPyPySyntax(new_text)
if toTest == None:
#print "Try again..."
#print "-----------FINISHED-------------------"
#insertTokMut(raw_tokens_pass, raw_text)
#print "-----------FINISHED-------------------"
#print "shit man"
lenR = 2
lenK = 2
return lenR, raw_tokens_pass, raw_text, actual_token_len, chosens, insToks
else:
#print "-----------FINISHED-------------------"
#print toTest[0]
#print toTest[0].filename
#print toTest[0].line
#print toTest[0].column
#print toTest[0].functionname
#print toTest[0].text
#print toTest[0].errorname
#print type(out_tokens_loc)
#print len(new_text)
#print NO_TOKEN
#print INSERTION
#print len(out_tokens_loc)
return new_text, NO_TOKEN, INSERTION, out_tokens_loc, chosens, insToks
def subTokMutS(raw_tokens, all_tokens, raw_text):
new_text = raw_text
with open('vocabulary_mutate.json') as data_file:
data = json.load(data_file)
#pprint(data)
#print "HI"
out_tokens_loc = []
raw_tokens_pass = []
actual_token_len = []
orig = []
for token in all_tokens:
token_use = token
#orig.append(token_use)
actual_token_len.append(token_use)
for token in raw_tokens:
token_use = token
orig.append(token_use)
raw_tokens_pass.append(token_use)
num_lines = len(actual_token_len)
num_encode = len(orig)
if (num_lines % 10 == 0):
numTokensNeeded = int((num_lines / 10))
else:
numTokensNeeded = int((num_lines / 10))
insToks = []
fixToks = []
chosens = []
#print numTokensNeeded
#print "import num"
inds = []
for i in actual_token_len:
if i.type != 'COMMENT':
if i.type != 'INDENT':
if i.type != 'DEDENT':
if i.type != 'NEWLINE':
if i.type != 'NL':
if i.type != 'ENDMARKER':
inds.append(actual_token_len.index(i))
allInds = []
for nah in range(numTokensNeeded+1):
temp = []
#print nah
for nahHoi in range(len(inds)):
if nah != 0:
flag = nah * 10
pastFlag = (nah-1)*10
#print "inds"
#print inds[nahHoi]
#print "indsSSS"
if pastFlag < inds[nahHoi] <= flag:
temp.append(inds[nahHoi])
if len(temp) != 0:
allInds.append(temp)
curr = 0
new_text = ''
haha = -1
radOut = 0
while radOut < len(allInds):
if radOut == (numTokensNeeded-1):
param_start = haha
param_end = num_lines-1
else:
param_start = radOut * 10
param_end = param_start + 9
haha = param_end
toChooseArr = allInds[radOut]
chosenLineIndTemp = randint(0, len(toChooseArr)-1) #num_lines-1
chosenLineInd = toChooseArr[chosenLineIndTemp]
#print "ok"
#print chosenLineInd
chosens.append(chosenLineInd)
#print radOut
source_code = raw_text
send = actual_token_len[chosenLineInd]
fixToks.append(send)
chosenInd = randint(0,84)
chosenToken = data["indexes_m"][chosenInd]
global new_token
new_token = []
try:
toksG = tokenize.tokenize(StringIO.StringIO(chosenToken).readline, handle_token)
except tokenize.TokenError:
pass
insEdTok = new_token[0]
insTok = insEdTok
insToks.append(insTok)
indexToRemove = source_code.index(actual_token_len[chosenLineInd].line)
temp = source_code[indexToRemove:indexToRemove+len(actual_token_len[chosenLineInd].line)+1]
change = temp.strip()
check = change.find(raw_tokens_pass[chosenLineInd][1])
shotInd = temp.index(raw_tokens_pass[chosenLineInd][1])
change = temp.strip()
check = temp.index(change)
#print "WHAT"
#print change
#print "TEMP"
#print temp
#print shotInd
actual_target_ind = indexToRemove + shotInd
#print raw_tokens_pass[chosenLineInd][1]
#print len(raw_tokens_pass[chosenLineInd][1])
#print len(change)
if check == 0 and len(raw_tokens_pass[chosenLineInd][1]) == len(change):
before = source_code[:indexToRemove]
else:
before = source_code[:actual_target_ind]
#print "B"
#print before
after = source_code[actual_target_ind+len(raw_tokens_pass[chosenLineInd][1]):]
#print "A"
#print after
#print chosenToken.encode()
if check == 0:
#print "GOT EM"
if len(after) > 0:
if after[0] == ' ':
new_text = before + chosenToken.encode() + after
else:
new_text = before + chosenToken.encode() + after
else:
new_text = before + chosenToken.encode() + after
else:
if chosenInd == data["indexes_m"].index('\n'):
#print "shiz"
if after[0] == ' ':
space = ' ' * (check-1)
else:
space = ' ' * (check)
new_text = before + chosenToken.encode() + space + after
else:
#print "WAS HERE"
new_text = before + chosenToken.encode() + after
#print actual_target_ind
#print '-------------------------------'
#print new_text
toTest = checkPyPySyntax(new_text)
if toTest == None:
#print radOut
#if radOut != 0:
# radOut = radOut-1
#else:
# radOut = 0
#print radOut
curr = curr + 1
if curr > 10:
radOut = radOut + 1
else:
radOut = radOut
fixToks.remove(send)
chosens.remove(chosenLineInd)
insToks.remove(insTok)
#print "test_t"
else:
curr = 0
radOut = radOut + 1
return new_text, YES_TOKEN, SUBSTITUTION, chosens, fixToks, insToks
def subTokMut(raw_tokens, raw_text):
with open('vocabulary_mutate.json') as data_file:
data = json.load(data_file)
#pprint(data)
#print "HI"
chosenInd = randint(0,84)
chosenToken = data["indexes_m"][chosenInd]
#print chosenToken
global new_token
new_token = []
try:
toksG = tokenize.tokenize(StringIO.StringIO(chosenToken).readline, handle_token)
except tokenize.TokenError:
pass
#print type(toksG)
#print len(new_token)
insEdTok = new_token[0]
insTokS = insEdTok
raw_tokens_pass = []
out_tokens_loc = []
orig = []
for token in raw_tokens:
token_use = token
orig.append(token_use)
if token[0] != 5:
if token[0] != 6:
if token[0] != 4:
if token[0] != 54:
if token[0] != 0:
if token[0] != 53:
raw_tokens_pass.append(token_use)
#print token
#print "OKAY"
num_lines = len(raw_tokens_pass)
num_encode = len(orig)
chosenLineInd = randint(0,num_lines-1) # num_lines-1
chosenTrueLineInd = -1
indI = 0
for x in orig:
if raw_tokens_pass[chosenLineInd] == x:
#print "<3"
chosenTrueLineInd = indI
break
indI = indI + 1
#print chosenTrueLineInd
toIter = num_encode + (num_encode+1)
for _ in range(toIter):
out_tokens_loc.extend('0')
lenD = len(out_tokens_loc)
for indI in range(toIter):
indLook = ((chosenTrueLineInd) * 2) + 1
if indI == indLook:
out_tokens_loc[indI] = ('1')
source_code = raw_text
send = Token(tokenize.tok_name[raw_tokens_pass[chosenLineInd][0]], raw_tokens_pass[chosenLineInd][1], raw_tokens_pass[chosenLineInd][2][0], raw_tokens_pass[chosenLineInd][2][1], raw_tokens_pass[chosenLineInd][3][0], raw_tokens_pass[chosenLineInd][3][1], raw_tokens_pass[chosenLineInd][4])
indexToRemove = source_code.index(raw_tokens_pass[chosenLineInd][4])
temp = source_code[indexToRemove:indexToRemove+len(raw_tokens_pass[chosenLineInd][4])+1]
change = temp.strip()
check = change.find(raw_tokens_pass[chosenLineInd][1])
shotInd = temp.index(raw_tokens_pass[chosenLineInd][1])
change = temp.strip()
check = temp.index(change)
#print "WHAT"
#print change
#print "TEMP"
#print temp
#print shotInd
actual_target_ind = indexToRemove + shotInd
#print raw_tokens_pass[chosenLineInd][1]
#print len(raw_tokens_pass[chosenLineInd][1])
#print len(change)
if check == 0 and len(raw_tokens_pass[chosenLineInd][1]) == len(change):
before = source_code[:indexToRemove]
else:
before = source_code[:actual_target_ind]
#print "B"
#print before
after = source_code[actual_target_ind+len(raw_tokens_pass[chosenLineInd][1]):]
#print "A"
#print after
if check == 0:
#print "GOT EM"
if len(after) > 0:
if after[0] == ' ':
new_text = before + chosenToken.encode() + after
else:
new_text = before + chosenToken.encode() + after
else:
new_text = before + chosenToken.encode() + after
else:
if chosenInd == data["indexes_m"].index('\n'):
#print "shiz"
if after[0] == ' ':
space = ' ' * (check-1)
else:
space = ' ' * (check)
new_text = before + chosenToken.encode() + space + after
else:
#print "WAS HERE"
new_text = before + chosenToken.encode() + after
#print actual_target_ind
#print '-------------------------------'
#print new_text
toTest = checkPyPySyntax(new_text)
if toTest == None:
#print "Try again..."
#subTokMut(raw_tokens_pass, raw_text)
#print new_text
lenR = 2
lenK = 2
return lenR, raw_tokens_pass, raw_text, lenK, send, insTokS
else:
#print toTest[0]
#print toTest[0].filename
#print toTest[0].line
#print toTest[0].column
#print toTest[0].functionname
#print toTest[0].text
#print toTest[0].errorname
return new_text, YES_TOKEN, SUBSTITUTION, out_tokens_loc, send, insTokS
def deleteTokMutS(raw_tokens, all_tokens, raw_text):
#out_tokens_loc = []
raw_tokens_pass = []
orig = []
actual_token_len = []
for token in all_tokens:
token_use = token
#orig.append(token_use)
actual_token_len.append(token_use)
for token in raw_tokens:
token_use = token
orig.append(token_use)
raw_tokens_pass.append(token_use)
#print token
#print "OKAY"
num_lines = len(actual_token_len)
num_encode = len(orig)
if (num_lines % 10 == 0):
numTokensNeeded = int((num_lines / 10))
else:
numTokensNeeded = int((num_lines / 10))
fixToks = []
chosens = []
haha = -1
radOut = 0
inds = []
for i in actual_token_len:
if i.type != 'COMMENT':
if i.type != 'INDENT':
if i.type != 'DEDENT':
if i.type != 'NEWLINE':
if i.type != 'NL':
if i.type != 'ENDMARKER':
inds.append(actual_token_len.index(i))
#print inds
#print len(inds)
#print len(actual_token_len)
#print type(radha)
allInds = []
for nah in range(numTokensNeeded + 1):
temp = []
#print nah
for nahHoi in range(len(inds)):
if nah != 0:
flag = nah * 10
pastFlag = (nah - 1) * 10
#print "inds"
#print inds[nahHoi]
#print "indsSSS"
if pastFlag < inds[nahHoi] <= flag:
temp.append(inds[nahHoi])
if len(temp) != 0:
allInds.append(temp)
#print allInds
#print type(radha)
#print len(allInds)
#print numTokensNeeded
curr = 0
new_text = ''
while radOut < len(allInds):
if radOut == (numTokensNeeded - 1):
param_start = haha
param_end = num_lines - 1
else:
param_start = radOut * 10
param_end = param_start + 9
haha = param_end
toChooseArr = allInds[radOut]
chosenLineIndTemp = randint(0, len(toChooseArr) - 1) #num_lines-1
chosenLineInd = toChooseArr[chosenLineIndTemp]
#print "ok"
#print chosenLineInd
chosens.append(chosenLineInd)
#print radOut
source_code = raw_text
send = actual_token_len[chosenLineInd]
#send = Token(tokenize.tok_name[raw_tokens_pass[chosenLineInd][0]], raw_tokens_pass[chosenLineInd][1], raw_tokens_pass[chosenLineInd][2][0], raw_tokens_pass[chosenLineInd][2][1], raw_tokens_pass[chosenLineInd][3][0], raw_tokens_pass[chosenLineInd][3][1], raw_tokens_pass[chosenLineInd][4])
fixToks.append(send)
indexToRemove = source_code.index(actual_token_len[chosenLineInd].line)
#print actual_token_len[chosenLineInd].line
temp = source_code[indexToRemove:indexToRemove +
len(actual_token_len[chosenLineInd].line) + 1]
#print "temp"
#print temp
change = temp.strip()
check = change.find(raw_tokens_pass[chosenLineInd][1])
#print actual_token_len[chosenLineInd].value
#print raw_tokens_pass[chosenLineInd][1]
shotInd = temp.index(raw_tokens_pass[chosenLineInd][1])
#print shotInd
#print change
#print "TEMP"
#print temp
#print shotInd
actual_target_ind = indexToRemove + shotInd
#print raw_tokens_pass[chosenLineInd][1]
#print len(raw_tokens_pass[chosenLineInd][1])
#print len(change)
if check == 0 and len(
raw_tokens_pass[chosenLineInd][1]) == len(change):
before = source_code[:indexToRemove]
else:
before = source_code[:actual_target_ind]
#print "B"
#print before
after = source_code[actual_target_ind +
len(raw_tokens_pass[chosenLineInd][1]):]
#print "A"
#print after
if check == 0:
#print "GOT EM"
new_text = before + after[1:]
else:
new_text = before + after
#print actual_target_ind
#print '-------------------------------'
#print new_text
toTest = checkPyPySyntax(new_text)
if toTest == None:
#print radOut
#if radOut != 0:
# radOut = radOut-1
#else:
# radOut = 0
#print radOut
curr = curr + 1
if curr > 10:
radOut = radOut + 1
else:
radOut = radOut
fixToks.remove(send)
chosens.remove(chosenLineInd)
#print "test_t"
else:
curr = 0
radOut = radOut + 1
return new_text, YES_TOKEN, DELETION, chosens, fixToks
def deleteTokMut(raw_tokens, raw_text):
out_tokens_loc = []
raw_tokens_pass = []
orig = []
for token in raw_tokens:
token_use = token
orig.append(token_use)
if token[0] != 5:
if token[0] != 6:
if token[0] != 4:
if token[0] != 54:
if token[0] != 53:
if token[0] != 0:
raw_tokens_pass.append(token_use)
#print token
#print "OKAY"
num_lines = len(raw_tokens_pass)
num_encode = len(orig)
chosenLineInd = randint(0, num_lines - 1) #num_lines-1
chosenTrueLineInd = -1
indI = 0
for x in orig:
if raw_tokens_pass[chosenLineInd] == x:
#print "<3"
chosenTrueLineInd = indI
break
indI = indI + 1
#print chosenTrueLineInd
toIter = num_encode + (num_encode + 1)
for _ in range(toIter):
out_tokens_loc.extend('0')
lenD = len(out_tokens_loc)
for indI in range(toIter):
indLook = ((chosenTrueLineInd) * 2) + 1
if indI == indLook:
out_tokens_loc[indI] = ('1')
source_code = raw_text
send = Token(tokenize.tok_name[raw_tokens_pass[chosenLineInd][0]],
raw_tokens_pass[chosenLineInd][1],
raw_tokens_pass[chosenLineInd][2][0],
raw_tokens_pass[chosenLineInd][2][1],
raw_tokens_pass[chosenLineInd][3][0],
raw_tokens_pass[chosenLineInd][3][1],
raw_tokens_pass[chosenLineInd][4])
indexToRemove = source_code.index(raw_tokens_pass[chosenLineInd][4])
temp = source_code[indexToRemove:indexToRemove +
len(raw_tokens_pass[chosenLineInd][4]) + 1]
change = temp.strip()
check = change.find(raw_tokens_pass[chosenLineInd][1])
shotInd = temp.index(raw_tokens_pass[chosenLineInd][1])
#print change
#print "TEMP"
#print temp
#print shotInd
actual_target_ind = indexToRemove + shotInd
#print raw_tokens_pass[chosenLineInd][1]
#print len(raw_tokens_pass[chosenLineInd][1])
#print len(change)
if check == 0 and len(raw_tokens_pass[chosenLineInd][1]) == len(change):
before = source_code[:indexToRemove]
else:
before = source_code[:actual_target_ind]
#print "B"
#print before
after = source_code[actual_target_ind +
len(raw_tokens_pass[chosenLineInd][1]):]
#print "A"
#print after
if check == 0:
#print "GOT EM"
new_text = before + after[1:]
else:
new_text = before + after
#print actual_target_ind
#print '-------------------------------'
#print new_text
toTest = checkPyPySyntax(new_text)
if toTest == None:
#print "Try again..."
#deleteTokMut(raw_tokens_pass, raw_text)
lenR = 2
lenK = 2
return lenR, raw_tokens_pass, raw_text, lenK, send
else:
#print toTest[0]
#print toTest[0].filename
#print toTest[0].line
#print toTest[0].column
#print toTest[0].functionname
#print toTest[0].text
#print toTest[0].errorname
#print "-----------FINISHED-------------------"
#print chosenLineInd+1
#print out_tokens_loc
return new_text, YES_TOKEN, DELETION, out_tokens_loc, send
def insertMut(raw_text):
with open('vocabulary_mutate.json') as data_file:
data = json.load(data_file)
pprint(data)
print "HI"
chosenInd = randint(0, 86)
chosenToken = data["indexes_m"][chosenInd]
print chosenToken
raw_text = str(raw_text)
num_lines = raw_text.count('\n') + 1
chosenLineInd = randint(1, num_lines)
print chosenLineInd
if chosenLineInd == 1:
first_strip = raw_text[:find_nth(raw_text, "\n", chosenLineInd)]
else:
first_strip = raw_text[find_nth(raw_text, "\n", chosenLineInd - 1) +
1:find_nth(raw_text, "\n", chosenLineInd)]
print len(first_strip)
print first_strip
chosenColInd = randint(1, len(first_strip) + 2)
first_col_strip = first_strip[:chosenColInd]
last_col_strip = first_strip[chosenColInd:]
new_line = first_col_strip + chosenToken + last_col_strip
print new_line
if chosenLineInd == 1:
print "F"
last_text = raw_text[find_nth(raw_text, "\n", chosenLineInd) + 1:]
print "L"
print last_text
final_code_text = new_line + "\n" + last_text
elif chosenLineInd == num_lines:
first_text = raw_text[:find_nth(raw_text, "\n", chosenLineInd - 1)]
print "F"
print first_text
final_code_text = first_text + "\n" + new_line
else:
first_text = raw_text[:find_nth(raw_text, "\n", chosenLineInd - 1)]
print "F"
print first_text
last_text = raw_text[find_nth(raw_text, "\n", chosenLineInd) + 1:]
print "L"
print last_text
final_code_text = first_text + new_line.encode() + "\n" + last_text
print '------------------------------------'
print final_code_text
print num_lines
toTest = checkPyPySyntax(final_code_text)
if toTest == None:
print "Try again..."
insertMut(raw_text)
else:
print toTest[0]
print toTest[0].filename
print toTest[0].line
print toTest[0].column
print toTest[0].functionname
print toTest[0].text
print toTest[0].errorname
print "-----------FINISHED-------------------"
def perform(curr):
sqlite_file = "/home/dhvani/python-sources.sqlite3"
conn = sqlite3.connect(sqlite_file)
c = conn.cursor()
#print "Success Connection to database..."
c.execute("SELECT source FROM source_file INNER JOIN eligible_source ON source_file.hash = eligible_source.hash")
#print "Executed SELECT..."
#print "Fetching all rows..."
all_rows = c.fetchmany(size=2600)
conn.close() # Close the connection to SQL
#for curr in range(2):
#print all_rows[curr][0]
if True:
#curr = 13
#print all_rows[curr][0]
#print "Got Em..."
#print "Running PyPy test..."
#print curr
toTest = checkPyPySyntax(all_rows[curr][0])
#print "DONE"
#print "CURRENT: "
# print curr
if toTest == None:
#print "here"
global all_tokens
all_tokens = []
global indexed_tokens
indexed_tokens = []
tokenStream = tokenize.tokenize(StringIO.StringIO(all_rows[curr][0]).readline, handle_token)
#print "RAW"
#print len(all_tokens)
allGood = []
global all_tokens
allGood = all_tokens[:]
print len(allGood)
#print "come on"
#print len(all_tokens)
#print len(allGood)
one_hot_good = vocabularize_tokens(all_tokens, False)
#one_hot_good_out = []
#for x in range(len(all_tokens)+(WINDOW_SIZE-1)+(WINDOW_SIZE-1)):
#toAdd = []
#toAdd = [0] * NUM_BITS_OUTPUT
#toAdd[0] = 0
#toAdd[1] = 1 # FIRST BIT (01) - INDICATE NO ERROR (1 because rest are 0 and so add up to 1)
#toAdd = [1]
#one_hot_good_out.append(1)
#print "DHVANI"
#print len(one_hot_good)
#print len(allGood)
#print len(all_tokens)
raw_tokens = tokenize.generate_tokens(StringIO.StringIO(all_rows[curr][0]).readline)
source_code = str(all_rows[curr][0])
#MUTATIONS PER TOKEN
# INSERT
#global all_tokens
#all_tokens = []
global indexed_tokens
indexed_tokens = []
#print "RAW"
#print len(all_tokens)
#passToks = all_tokens[:]
#print len(passToks)
#print "come
global all_tokens
print "dhadha"
#print len(all_tokens)
#print len(allGood)
passBall = allGood[:]
new_i_text, NO_TOKEN, INSERTION, out_tokens_loc, chosenTrueLineInds, insToks = insertTokMutS(raw_tokens, passBall, source_code)
while isinstance(new_i_text, int):
new_i_text, NO_TOKEN, INSERTION, out_tokens_loc, chosenTrueLineInds, insToks = insertTokMutS(NO_TOKEN, out_tokens_loc, INSERTION)
if isinstance(new_i_text, str):
break
print "here"
new_tokens_ins = allGood[:]
#print "BOL BOL BOL"
#print len(new_tokens_ins)
temp = insToks[:]
for insTok in temp:
if insTok.type == "NL":
insToks[insToks.index(insTok)].type = "NEWLINE"
temp2 = chosenTrueLineInds[:]
for chosenTrueLineInd in temp2:
vocab_entry = open_closed_tokens(chosenTrueLineInd)
chosenTrueLineInds[chosenTrueLineInds.index(chosenTrueLineInd)].value = vocab_entry
#print vocab_entry
#print "OK ------------------------------"
#print len(new_tokens_ins)
#print len(chosenTrueLineInds)
#print len(all_tokens)
bruhInd = 0
for wow in range(len(chosenTrueLineInds)):
bruhInd = -1
iterInd = 0
chosenTrueLineInd = chosenTrueLineInds[wow]
insTok = insToks[wow]
#print len(all_tokens)
for a in allGood:
if a == chosenTrueLineInd:
bruhInd = iterInd
iterInd = iterInd + 1
#print bruhInd + 1
#print bruhInd
#print "gotchu"
if bruhInd != -1:
#print bruhInd
#print "gotchu"
new_tokens_ins.insert(bruhInd+1, insTok)
#print "START DEBUG"
#print insTok.value
#print len(new_tokens_ins)
#print new_tokens_ins[bruhInd+1].value
one_hot_bad_ins = vocabularize_tokens(new_tokens_ins, True)
#print one_hot_bad_ins[bruhInd+1+WINDOW_SIZE-1]
#print "DONE DEBUG"
#print len(new_tokens_ins)
#print len(one_hot_bad_ins)
#if(bruhInd+1 < len(new_tokens_ins)):
#print "NEXT STEP...C"
#passInsErrorInd = (bruhInd+1)+(WINDOW_SIZE-1)
#one_hot_bad_ins_out = []
#trueErrorInd = (bruhInd+1)+(WINDOW_SIZE-1)
# INSERT OUT_PUT
#iterNum = len(new_tokens_ins)+(WINDOW_SIZE-1)+(WINDOW_SIZE-1)
#print "divide"
#print trueErrorInd
#print iterNum
'''
for x in range(iterNum):
#if x <= trueErrorInd <= (x+trueErrorInd):
#if x <= trueErrorInd <= x+(WINDOW_SIZE-1):
if True:
# DIFF - ACTUAL ERROR
#print x
#toAdd = []
#toAdd = [0] * NUM_BITS_OUTPUT
#toAdd[0] = 1 # FIRST BIT (10) - INDICATE ERROR
#toAdd[1] = 0
#if NO_TOKEN != None:
# toAdd[2] = 0
# toAdd[3] = 1
#if INSERTION != None:
# toAdd[4] = 0
# toAdd[5] = 0
# toAdd[6] = 1
#toAdd[7] = 1
toAdd = [0,3,6,7]
one_hot_bad_ins_out.append(toAdd)
else:
toAdd = []
toAdd = [0] * NUM_BITS_OUTPUT
toAdd[0] = 1
toAdd[1] = 0 # FIRST BIT (01) - INDICATE NO ERROR (1 because rest are 0 and so add up to 1)
one_hot_bad_ins_out.append(toAdd)
'''
#print "Morning"
#print len(new_tokens_ins)
#print len(one_hot_bad_ins_out)
#print one_hot_bad_ins_out[trueErrorInd]
# DELETE
raw_tokens = tokenize.generate_tokens(StringIO.StringIO(all_rows[curr][0]).readline)
#global all_tokens
#all_tokens = []
global indexed_tokens
indexed_tokens = []
#print type(raw_tokens)
#print type(source_code)
passBall = allGood[:]
new_d_text, YES_TOKEN, DELETION, chosens, fixToks = deleteTokMutS(raw_tokens,passBall, source_code)
while isinstance(new_d_text, int):
new_d_text, YES_TOKEN, DELETION, chosens, fixToks = deleteTokMutS(YES_TOKEN, DELETION)
if isinstance(new_d_text, str):
break
print "NEXT STEP..."
new_tokens_del = allGood[:]
tempFix = fixToks[:]
for send in tempFix:
vocab_entry = open_closed_tokens(send)
fixToks[fixToks.index(send)].value = vocab_entry
#print "len"
#print len(allGood)
#print len(fixToks)
#print len(new_tokens_del)
removeInds = []
for wow in range(len(chosens)):
bruhInd = -1
iterInd = 0
send = fixToks[wow]
#print send.value
for a in allGood:
if a == send:
bruhInd = iterInd
iterInd = iterInd + 1
#print bruhInd
#print "CHECK"
#print len(new_tokens_del)
removeInds.append(bruhInd)
#del new_tokens_del[bruhInd]
#print len(new_tokens_del)
#print "DEL ROR"
for r in reversed(removeInds):
del new_tokens_del[r]
#print len(new_tokens_del)
one_hot_bad_del = vocabularize_tokens(new_tokens_del, True)
#one_hot_bad_del_out = []
#trueErrorInd = (bruhInd)+(WINDOW_SIZE-1)
# DELETE OUT_PUT
#iterNum = len(new_tokens_del)+(WINDOW_SIZE-1)+(WINDOW_SIZE-1)
#print "divide"
#print len(send)
#print trueErrorInd
#print iterNum
#print "delete"
#print send.type
#print send.value
#oneH_ind_deleted = set_from_json_nonarr(send, True)
#print oneH_ind_deleted
#print "rad"
'''
for x in range(iterNum):
#if x <= trueErrorInd <= (x+trueErrorInd):
if True:
# DIFF - ACTUAL ERROR
#print x
#toAdd = []
#toAdd = [0] * NUM_BITS_OUTPUT
#toAdd[0] = 1 # FIRST BIT (10) - INDICATE ERROR
#toAdd[1] = 0
#if YES_TOKEN != None:
# toAdd[2] = 1
# toAdd[3] = 0
#if DELETION != None:
# toAdd[4] = 0
# toAdd[5] = 1
# toAdd[6] = 0
#toAdd[7] = 1
#toAdd[17] = 1
toAdd = [0,2,5,7,17]
one_hot_bad_del_out.append(toAdd)
else:
toAdd = []
toAdd = [0] * NUM_BITS_OUTPUT
toAdd[0] = 0
toAdd[1] = 1 # FIRST BIT (01) - INDICATE NO ERROR (1 because rest are 0 and so add up to 1)
one_hot_bad_del_out.append(toAdd)
'''
#print "Morning"
#print len(allGood)
#print len(one_hot_bad_del_out)
#print one_hot_bad_del_out[trueErrorInd]
# SUB
raw_tokens = tokenize.generate_tokens(StringIO.StringIO(all_rows[curr][0]).readline)
#global all_tokens
#all_tokens = []
global indexed_tokens
indexed_tokens = []
#print type(raw_tokens)
passBall = allGood[:]
new_s_text, YES_TOKEN, SUBSTITUTION, chosensS, fixToksS, insToksS = subTokMutS(raw_tokens, passBall, source_code)
while isinstance(new_s_text, int):
new_s_text, YES_TOKEN, SUBSTITUTION, chosensS, fixToksS, insToksS = subTokMutS(YES_TOKEN, SUBSTITUTION)
if isinstance(new_s_text, str):
break
#print "NEXT STEP..."
# SUB DELETE
new_tokens_sub = allGood[:]
temp = insToksS[:]
for insTok in temp:
if insTok.type == "NL":
insToks[insToksS.index(insTok)].type = "NEWLINE"
tempFix = fixToksS[:]
for send in tempFix:
vocab_entry = open_closed_tokens(send)
fixToksS[fixToksS.index(send)].value = vocab_entry
removeInds = []
for wow in range(len(chosensS)):
bruhInd = -1
iterInd = 0
send = fixToksS[wow]
#print send.value
for a in allGood:
if a == send:
bruhInd = iterInd
iterInd = iterInd + 1
#print bruhInd
#print "CHECK"
#print len(new_tokens_del)
removeInds.append(bruhInd)
#del new_tokens_del[bruhInd]
#print len(new_tokens_del)
#print "DEL ROR"
# SUB INSERT
#print len(removeInds)
#print len(insToksS)
comeIter = len(insToksS)-1
for r in reversed(removeInds):
del new_tokens_sub[r]
#print insToksS[comeIter].value
new_tokens_sub.insert(r, insToksS[comeIter])
comeIter -= 1
#for x in new_tokens_sub:
#print x.value
#print len(new_tokens_del)
#print insTokS.type
#print insTokS.value
#print "LUNCH"
one_hot_bad_sub = vocabularize_tokens(new_tokens_sub, True)
#one_hot_bad_sub_out = []
#trueErrorInd = (bruhInd)+(WINDOW_SIZE-1)
# SUB OUT_PUT
#iterNum = len(new_tokens_sub)+(WINDOW_SIZE-1)+(WINDOW_SIZE-1)
#print "divide"
#print len(send)
#print trueErrorInd
#print iterNum
#print "sub"
#print sendS.type
#print sendS.value
#oneH_sub_switch = set_from_json_nonarr(sendS, True)
#print oneH_sub_switch
#print "rad"
'''
for x in range(iterNum):
#if x <= trueErrorInd <= (x+trueErrorInd):
#if x <= trueErrorInd <= x+(WINDOW_SIZE-1):
if True:
# DIFF - ACTUAL ERROR
#print x
#toAdd = []
#toAdd = [0] * NUM_BITS_OUTPUT
#toAdd[0] = 1 # FIRST BIT (10) - INDICATE ERROR
#toAdd[1] = 0
#toAdd[2] = 1
#toAdd[3] = 0
#toAdd[4] = 1
#toAdd[5] = 0
#toAdd[6] = 0
#toAdd[7] = 1
#toAdd[17] = 1
toAdd = [0,2,4,7,17]
one_hot_bad_sub_out.append(toAdd)
else:
toAdd = []
toAdd = [0] * NUM_BITS_OUTPUT
toAdd[0] = 0
toAdd[1] = 1 # FIRST BIT (01) - INDICATE NO ERROR (1 because rest are 0 and so add up to 1)
one_hot_bad_sub_out.append(toAdd)
'''
#print "Morning"
#print len(allGood)
#print len(all_tokens)
#print len(one_hot_bad_sub_out)
#print one_hot_bad_sub_out[trueErrorInd]
# MUTATIONS PER CHARACTER
# insertMut(source_code)
#deleteMut(source_code])
#print "LEN"
#print one_hot_good[0]
#print one_hot_bad[0]
#print "----------INPUT-------------"
#print len(one_hot_good)
#print len(one_hot_bad_ins)
#print len(one_hot_bad_del)
#print len(one_hot_bad_sub)
#print "----------OUTPUT-------------"
#print len(one_hot_good_out)
#print len(one_hot_bad_ins_out)
#print len(one_hot_bad_del_out)
#print len(one_hot_bad_sub_out)
#print curr
#one_hot_all = np.concatenate((one_hot_good, one_hot_bad), axis=0)
#print "SUCCESS"
#sizes = [len(one_hot_good), len(one_hot_bad_ins),len(one_hot_bad_del),len(one_hot_bad_sub)]
#minSize = int(min(float(siz) for siz in sizes)) # min of a generator
#return minSize
#toPassGood = []
#print len(one_hot_good)
#for good in one_hot_good:
# ind = good.index(1.0)
# toPassGood.append(ind)
#print len(toPassGood)
#print one_hot_bad_sub_out
#print type(radha)
toPass = [one_hot_good, one_hot_bad_ins, one_hot_bad_del, one_hot_bad_sub]
#toPass = sparse.csr_matrix(toPassMatrix)
#print toPass
#print type(radha)
#cPickle.dump(one_hot_bad_ins, fileStore)
#cPickle.dump(one_hot_bad_del, fileStore)
#cPickle.dump(one_hot_bad_sub, fileStore)
#cPickle.dump(one_hot_good_out, fileStore)
#cPickle.dump(one_hot_bad_ins_out, fileStore)
#cPickle.dump(one_hot_bad_del_out, fileStore)
#cPickle.dump(one_hot_bad_sub_out, fileStore)
#cPickle.dump(passInsErrorInd, fileStore)
return toPass
#return one_hot_good, one_hot_bad_ins, one_hot_bad_del, one_hot_bad_sub, one_hot_good_out, one_hot_bad_ins_out, one_hot_bad_del_out, one_hot_bad_sub_out,passInsErrorInd
else:
print "Try again..."
print curr
#print all_rows[curr][0]
return -1
def deleteMut(raw_text):
first_strip = ''
while len(first_strip) == 0:
raw_text = str(raw_text)
num_lines = raw_text.count('\n') + 1
chosenLineInd = randint(1, num_lines)
print chosenLineInd
if chosenLineInd == 1:
first_strip = raw_text[:find_nth(raw_text, "\n", chosenLineInd)]
else:
first_strip = raw_text[find_nth(raw_text, "\n", chosenLineInd -
1) +
1:find_nth(raw_text, "\n", chosenLineInd)]
print len(first_strip)
print first_strip
chosenColInd = randint(1, len(first_strip) + 2)
first_col_strip = first_strip[:chosenColInd - 1]
last_col_strip = first_strip[chosenColInd:]
new_line = first_col_strip + last_col_strip
if chosenLineInd == 1:
print "F"
last_text = raw_text[find_nth(raw_text, "\n", chosenLineInd) + 1:]
print "L"
print last_text
final_code_text = new_line + "\n" + last_text
elif chosenLineInd == num_lines:
first_text = raw_text[:find_nth(raw_text, "\n", chosenLineInd - 1)]
print "F"
print first_text
final_code_text = first_text + "\n" + new_line
else:
first_text = raw_text[:find_nth(raw_text, "\n", chosenLineInd - 1)]
print "F"
print first_text
last_text = raw_text[find_nth(raw_text, "\n", chosenLineInd) + 1:]
print "L"
print last_text
final_code_text = first_text + new_line.encode() + "\n" + last_text
print '------------------------------------'
print final_code_text
print num_lines
toTest = checkPyPySyntax(final_code_text)
if toTest == None:
print "Try again..."
deleteMut(raw_text)
else:
print toTest[0]
print toTest[0].filename
print toTest[0].line
print toTest[0].column
print toTest[0].functionname
print toTest[0].text
print toTest[0].errorname
print "-----------FINISHED-------------------"
def test_syntax_ok(self):
toTest = checkPyPySyntax('a=1+2')
self.assertTrue(toTest is None)
def test_syntax_ok(self):
toTest = checkPyPySyntax('a=1+2')
self.assertTrue(toTest is None)