def convert_storm_track(atcf_path):
output_path = os.path.join(os.getcwd(), 'katrina.storm')
katrina = Storm(path=atcf_path, file_format='ATCF')
# Landfall of hurricane 1110 UTC (6:10 a.m. CDT) on Monday, August 29, 2005
katrina.time_offset = datetime.datetime(2005, 8, 29, 11, 10)
katrina.write(output_path, file_format='geoclaw')
return output_path
def set_storm(rundata):
data = rundata.surge_data
# Source term controls - These are currently not respected
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
# Source term algorithm parameters
# data.wind_tolerance = 1e-4
# data.pressure_tolerance = 1e-4 # Pressure source term tolerance
# AMR parameters
data.wind_refine = [20.0,40.0,60.0] # m/s
data.R_refine = [60.0e3,40e3,20e3] # m
# Storm parameters
data.storm_specification_type = "holland80" # Type of storm
data.display_landfall_time = True
# Storm type 1 - Idealized storm track
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(), 'florence.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file('http://ftp.nhc.noaa.gov/atcf/archive/2018/bal062018.dat.gz')
atcf_path = os.path.join(scratch_dir, 'bal062018.dat')
florence = Storm(path=atcf_path, file_format="ATCF")
florence.time_offset = datetime.datetime(2018,9,14,7,15)
florence.write(data.storm_file, file_format="geoclaw")
return data
def convert_storm_track(atcf_path):
output_path = os.path.join(os.getcwd(), 'katrina.storm')
katrina = Storm(path=atcf_path, file_format='ATCF')
# Landfall of hurricane 1110 UTC (6:10 a.m. CDT) on Monday, August 29, 2005
katrina.time_offset = datetime.datetime(2005, 8, 29, 11, 10)
katrina.write(output_path, file_format='geoclaw')
return output_path
def set_storm(rundata):
data = rundata.surge_data
# Source term controls - These are currently not respected
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
# Source term algorithm parameters
# data.wind_tolerance = 1e-4
# data.pressure_tolerance = 1e-4 # Pressure source term tolerance
# AMR parameters
data.wind_refine = [20.0,40.0,60.0] # m/s
data.R_refine = [60.0e3,40e3,20e3] # m
# Storm parameters
data.storm_specification_type = "holland80" # Type of storm
# data.landfall = days2seconds(irene_landfall.days) + irene_landfall.seconds
data.display_landfall_time = True
# Storm type 1 - Idealized storm track
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),'IRENE.storm'))
irene = Storm("irene.storm", file_format='ATCF')
irene.time_offset = datetime.datetime(2011,8,27,7,30)
irene.write(data.storm_file, file_format="geoclaw")
return data
def set_storm(rundata):
data = rundata.surge_data
# Source term controls - These are currently not respected
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
# Source term algorithm parameters
# data.wind_tolerance = 1e-4
# data.pressure_tolerance = 1e-4 # Pressure source term tolerance
# AMR parameters
data.wind_refine = [20.0,40.0,60.0] # m/s
data.R_refine = [60.0e3,40e3,20e3] # m
# Storm parameters
data.storm_specification_type = "holland80" # Type of storm
# data.landfall = days2seconds(irene_landfall.days) + irene_landfall.seconds
data.display_landfall_time = True
# Storm type 1 - Idealized storm track
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),'IRENE.storm'))
irene = Storm("irene.storm", file_format='ATCF')
irene.time_offset = datetime.datetime(2011,8,27,7,30)
irene.write(data.storm_file, file_format="geoclaw")
return data
def set_storm(rundata):
data = rundata.surge_data
# Physics parameters
data.rho_air = 1.15
data.ambient_pressure = 101.3e3 # Nominal atmos pressure
# Source term controls - These are currently not respected
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
# Source term algorithm parameters
# data.wind_tolerance = 1e-4
# data.pressure_tolerance = 1e-4 # Pressure source term tolerance
# AMR parameters
data.wind_refine = [20.0, 40.0, 60.0] # m/s
data.R_refine = [60.0e3, 40e3, 20e3] # m
# Storm parameters
data.storm_type = 1 # Type of storm
data.landfall = days2seconds(ike_landfall.days) + ike_landfall.seconds
data.display_landfall_time = True
# Storm type 1 - Idealized storm track
#data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),'ike.storm'))
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),
'ike.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2008/bal092008.dat.gz")
atcf_path = os.path.join(scratch_dir, "bal092008.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
# Uncomment/comment out to use the old version of the Ike storm file
# ike = Storm(path="old_ike.storm", file_format="ATCF")
ike = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (9/13/2008 ~ 7 UTC)
ike.time_offset = datetime.datetime(2008, 9, 13, 7)
ike.write(data.storm_file, file_format='geoclaw')
return rundata
def set_storm(rundata):
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.pressure_forcing = True
data.drag_law = 2
data.display_landfall_time = True
# AMR parameters - m/s for wind refinement and (m) for radius
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Storm Type 1 is Holland parameterized
data.storm_specification_type = 'holland80'
data.storm_file = os.path.expandvars(
os.path.join(os.getcwd(), 'katrina.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
'http://ftp.nhc.noaa.gov/atcf/archive/2005/bal122005.dat.gz')
atcf_path = os.path.join(scratch_dir, "bal122005.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
# Read in the newly downloaded and decompressed file
katrina = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time
katrina.time_offset = datetime.datetime(2005, 8, 29, 11, 10)
# Write out the storm data into the GeoClaw format
katrina.write(data.storm_file, file_format='geoclaw')
return data
directory = "data/synthetic_storm_files"
if not os.path.exists(os.path.join(os.getcwd(), directory)):
os.makedirs(directory)
# File to tracy synthetic storm in atcf format
tracy_atcf_path = 'data/tracy_synthetic_atcf.storm'
# Establish a control form of tracy
control = Storm(path=tracy_atcf_path, file_format='ATCF')
control.read_atcf(path=tracy_atcf_path)
# Change tracy to piece wise constant wind curve
u0 = control.max_wind_speed[1]
control.max_wind_speed = piecewise_wind_curve(u0, control.max_wind_speed)
control.write("data/tracy_geoclaw.storm", file_format="geoclaw")
perturbed_radii = []
perturbed_winds = []
# Create storm objects with perturbed wind data
for i in range(0, 1000):
storm = copy.copy(control)
mws = copy.copy(control.max_wind_speed)
mws = perturb_wind(mws)
C0 = 218.3784 * numpy.ones(len(mws))
mwr = C0 - 1.2014 * mws + (mws / 10.9884)**2 - (
mws / 35.3052)**3 - 145.5090 * numpy.cos(
control.eye_location[:, 1] * 0.0174533)
storm.max_wind_speed = mws
storm.max_wind_radius = mwr
def setgeo(rundata):
#-------------------
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
try:
geo_data = rundata.geo_data
except:
print("*** Error, this rundata has no geodata attribute")
raise AttributeError("Missing geodata attribute")
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
geo_data.sea_level = 0.0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form
# [topotype, minlevel, maxlevel, t1, t2, fname]
topo_path = os.path.join(os.environ["DATA_PATH"], "topography")
topo_data.topofiles.append([3, 1, 3, rundata.clawdata.t0,
rundata.clawdata.tfinal,
os.path.join(topo_path, 'atlantic',
'full_1min.tt3')])
topo_data.topofiles.append([4, 1, 5, rundata.clawdata.t0,
rundata.clawdata.tfinal,
os.path.join(topo_path,
'new_york_area_3second.nc')])
# == setqinit.data values ==
rundata.qinit_data.qinit_type = 0
rundata.qinit_data.qinitfiles = []
# for qinit perturbations, append lines of the form: (<= 1 allowed for now!)
# [minlev, maxlev, fname]
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters
data.wind_refine = [20.0,40.0,60.0] # m/s
data.R_refine = [60.0e3,40e3,20e3] # m
# Storm parameters
data.storm_specification_type = "holland80" # Set type of storm field
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),
'sandy.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2012/bal182012.dat.gz",
output_dir=os.getcwd())
atcf_path = os.path.join(os.getcwd(), "bal182012.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
sandy = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (9/13/2008 ~ 7 UTC)
sandy.time_offset = datetime.datetime(2012,10,30,0,0)
sandy.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain - seems high on land...
data.friction_regions.append([rundata.clawdata.lower,
rundata.clawdata.upper,
[np.infty,0.0,-np.infty],
[0.050, 0.025]])
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form
# See regions for control over these regions, need better bathy data for
# the smaller domains
irene_path = os.path.join(DATA, 'irenetopo.tt3')
topo_data.topofiles.append(
[3, 1, 5, rundata.clawdata.t0, rundata.clawdata.tfinal, irene_path])
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(
os.path.join(os.getcwd(), 'irene.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2011/bal092011.dat.gz")
atcf_path = os.path.join(DATA, "bal092011.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
irene = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (9/13/2008 ~ 7 UTC)
irene.time_offset = datetime.datetime(2011, 8, 27, 12)
irene.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([
rundata.clawdata.lower, rundata.clawdata.upper,
[np.infty, 0.0, -np.infty], [0.030, 0.022]
])
# La-Tex Shelf
data.friction_regions.append([(-98, 25.25), (-90, 30),
[np.infty, -10.0, -200.0, -np.infty],
[0.030, 0.012, 0.022]])
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 1
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.theta_0 = 25.0 # Beta-plane approximation center
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0.0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form
# [topotype, fname]
topo_data.topofiles.append([2, 'topo.tt2'])
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.wind_index = 2
data.pressure_index = 4
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),
'fake.storm'))
# Contruct storm
forward_velocity = units.convert(20, 'km/h', 'm/s')
theta = 0.0 * numpy.pi / 180.0 # degrees from horizontal to radians
my_storm = Storm()
# Take seconds and time period of 30 minutes and turn them into datatimes
t_ref = datetime.datetime.now()
t_sec = numpy.arange(-RAMP_UP_TIME, rundata.clawdata.tfinal, 30.0 * 60.0)
my_storm.t = [t_ref + datetime.timedelta(seconds=t) for t in t_sec]
ramp_func = lambda t: (t + (2 * RAMP_UP_TIME)) * (t < 0) / (2 * RAMP_UP_TIME) \
+ numpy.ones(t_sec.shape) * (t >= 0)
my_storm.time_offset = t_ref
my_storm.eye_location = numpy.empty((t_sec.shape[0], 2))
my_storm.eye_location[:, 0] = forward_velocity * t_sec * numpy.cos(theta)
my_storm.eye_location[:, 1] = forward_velocity * t_sec * numpy.sin(theta)
my_storm.max_wind_speed = units.convert(56, 'knots', 'm/s') * ramp_func(t_sec)
my_storm.central_pressure = units.convert(1024, "mbar", "Pa") \
- (units.convert(1024, "mbar", "Pa") \
- units.convert(950, 'mbar', 'Pa')) \
* ramp_func(t_sec)
my_storm.max_wind_radius = [units.convert(8, 'km', 'm')] * t_sec.shape[0]
my_storm.storm_radius = [units.convert(100, 'km', 'm')] * t_sec.shape[0]
my_storm.write(data.storm_file, file_format="geoclaw")
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = False
data.friction_index = 1
return rundata
def setgeo(rundata):
#-------------------
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
try:
geo_data = rundata.geo_data
except:
print("*** Error, this rundata has no geodata attribute")
raise AttributeError("Missing geodata attribute")
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
geo_data.sea_level = 0.33
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form
# [topotype, minlevel, maxlevel, t1, t2, fname]
topo_path = '../bathy'
topo_data.topofiles.append([3, 1, 3, days2seconds(-2), days2seconds(1), os.path.join(topo_path,'atlantic_1min.tt3')])
topo_data.topofiles.append([3, 1, 3, days2seconds(-2), days2seconds(1), os.path.join(topo_path,'newyork_3s.tt3')])
# restrict these make max lower and for all time
# for file in glob.glob("../bathy/*.nc"):
topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x00_74x00.nc')])
topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc40x75_74x00.nc')])
topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc40x50_74x00.nc')])
topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc40x75_73x75.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc40x75_73x50.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x00_73x25.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'montauk_13.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc40x75_73x25.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x25_74x00.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x25_73x75.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x25_73x50.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x25_73x25.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x00_73x75.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x00_73x50.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc40x75_73x00.nc')])
# topo_data.topofiles.append([4, 1, 6, days2seconds(-0.45),days2seconds(0.46),os.path.join(topo_path,'nc41x00_73x00.nc')])
#print(topo_data.topofiles)
# == setqinit.data values ==
rundata.qinit_data.qinit_type = 0
rundata.qinit_data.qinitfiles = []
# for qinit perturbations, append lines of the form: (<= 1 allowed for now!)
# [minlev, maxlev, fname]
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters
data.wind_refine = [20.0,40.0,60.0] # m/s
data.R_refine = [60.0e3,40e3,20e3] # m
# Storm parameters
data.storm_specification_type = "holland80" # Set type of storm field
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),
'sandy.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2012/bal182012.dat.gz",
output_dir=os.getcwd())
atcf_path = os.path.join(os.getcwd(), "bal182012.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file:
with open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
sandy = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (9/13/2008 ~ 7 UTC)
sandy.time_offset = datetime.datetime(2012,10,30,0,0)
sandy.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain - seems high on land...
data.friction_regions.append([rundata.clawdata.lower,
rundata.clawdata.upper,
[np.infty,0.0,-np.infty],
[0.050, 0.025]])
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
try:
geo_data = rundata.geo_data
except:
print("*** Error, this rundata has no geo_data attribute")
raise AttributeError("Missing geo_data attribute")
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
geo_data.sea_level = 0.0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form
# [topotype, fname]
# See regions for control over these regions, need better bathy data for
# the smaller domains
clawutil.data.get_remote_file(
"http://www.columbia.edu/~ktm2132/bathy/gulf_caribbean.tt3.tar.bz2")
topo_path = os.path.join(scratch_dir, 'gulf_caribbean.tt3')
topo_data.topofiles.append([3, topo_path])
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls - These are currently not respected
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(
os.path.join(os.getcwd(), 'isaac.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2012/bal092012.dat.gz")
atcf_path = os.path.join(scratch_dir, "bal092012.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
# Uncomment/comment out to use the old version of the Ike storm file
isaac = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (~2345 UTC - 6:45 p.m. CDT - on August 28)
isaac.time_offset = datetime.datetime(2012, 8, 29, 0)
isaac.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([
rundata.clawdata.lower, rundata.clawdata.upper,
[np.infty, 0.0, -np.infty], [0.030, 0.022]
])
# La-Tex Shelf
data.friction_regions.append([(-98, 25.25), (-90, 30),
[np.infty, -10.0, -200.0, -np.infty],
[0.030, 0.012, 0.022]])
return rundata
def setgeo(rundata):
#-------------------
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
try:
geo_data = rundata.geo_data
except:
print("*** Error, this rundata has no geo_data attribute")
raise AttributeError("Missing geo_data attribute")
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 1
geo_data.earth_radius = 6367.5e3
geo_data.rho = [1025.0 * 0.9, 1025.0]
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.theta_0 = 25.0 # Beta-plane approximation center
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
geo_data.sea_level = 0.0
geo_data.dry_tolerance = 1.e-2
# Refinement settings
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
# for topography, append lines of the form
# [topotype, minlevel, maxlevel, t1, t2, fname]
topo_data.topofiles.append([2, 1, 5, -RAMP_UP_TIME, 1e10, 'topo.tt2'])
# == setdtopo.data values ==
dtopo_data = rundata.dtopo_data
# for moving topography, append lines of the form : (<= 1 allowed for now!)
# [topotype, minlevel,maxlevel,fname]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.wind_index = 2
data.pressure_index = 4
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(
os.path.join(os.getcwd(), 'fake.storm'))
# Contruct storm
forward_velocity = units.convert(20, 'km/h', 'm/s')
theta = 0.0 * numpy.pi / 180.0 # degrees from horizontal to radians
my_storm = Storm()
# Take seconds and time period of 30 minutes and turn them into datatimes
t_ref = datetime.datetime.now()
t_sec = numpy.arange(-RAMP_UP_TIME, rundata.clawdata.tfinal, 30.0 * 60.0)
my_storm.t = [t_ref + datetime.timedelta(seconds=t) for t in t_sec]
ramp_func = lambda t: (t + (2 * RAMP_UP_TIME)) * (t < 0) / (2 * RAMP_UP_TIME) \
+ numpy.ones(t_sec.shape) * (t >= 0)
my_storm.time_offset = t_ref
my_storm.eye_location = numpy.empty((t_sec.shape[0], 2))
my_storm.eye_location[:, 0] = forward_velocity * t_sec * numpy.cos(theta)
my_storm.eye_location[:, 1] = forward_velocity * t_sec * numpy.sin(theta)
my_storm.max_wind_speed = units.convert(56, 'knots',
'm/s') * ramp_func(t_sec)
my_storm.central_pressure = units.convert(1024, "mbar", "Pa") \
- (units.convert(1024, "mbar", "Pa") \
- units.convert(950, 'mbar', 'Pa')) \
* ramp_func(t_sec)
my_storm.max_wind_radius = [units.convert(8, 'km', 'm')] * t_sec.shape[0]
my_storm.storm_radius = [units.convert(100, 'km', 'm')] * t_sec.shape[0]
my_storm.write(data.storm_file, file_format="geoclaw")
# ======================
# Multi-layer settings
# ======================
data = rundata.multilayer_data
# Physics parameters
data.num_layers = 2
data.eta = [0.0, -300.0]
# Algorithm parameters
data.eigen_method = 2
data.inundation_method = 2
data.richardson_tolerance = 1e10
data.wave_tolerance = [0.1, 0.5]
data.layer_index = 1
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = False
data.friction_index = 1
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0.28
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form
# [topotype, minlevel, maxlevel, t1, t2, fname]
# See regions for control over these regions, need better bathy data for
# the smaller domains
clawutil.data.get_remote_file(
"http://www.columbia.edu/~ktm2132/bathy/gulf_caribbean.tt3.tar.bz2")
topo_path = os.path.join(scratch_dir, 'gulf_caribbean.tt3')
topo_data.topofiles.append([3, 1, 5, rundata.clawdata.t0,
rundata.clawdata.tfinal,
topo_path])
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),
'ike.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2008/bal092008.dat.gz")
atcf_path = os.path.join(scratch_dir, "bal092008.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
# Uncomment/comment out to use the old version of the Ike storm file
# ike = Storm(path="old_ike.storm", file_format="ATCF")
ike = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (9/13/2008 ~ 7 UTC)
ike.time_offset = datetime.datetime(2008, 9, 13, 7)
ike.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([rundata.clawdata.lower,
rundata.clawdata.upper,
[np.infty, 0.0, -np.infty],
[0.030, 0.022]])
# La-Tex Shelf
data.friction_regions.append([(-98, 25.25), (-90, 30),
[np.infty, -10.0, -200.0, -np.infty],
[0.030, 0.012, 0.022]])
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0.0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
topo_data.topofiles.append([3, 1, 3, rundata.clawdata.t0,
rundata.clawdata.tfinal,
'../bathy/atlantic_2min.tt3'])
topo_data.topofiles.append([3, 1, 5, rundata.clawdata.t0,
rundata.clawdata.tfinal,
'../bathy/newyork_3s.tt3'])
# == setqinit.data values ==
rundata.qinit_data.qinit_type = 0
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls - These are currently not respected
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80'
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),
'sandy.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2012/bal182012.dat.gz")
atcf_path = os.path.join(scratch_dir, "bal182012.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
sandy = Storm(path=atcf_path, file_format="ATCF", single_storm=True)
# Calculate landfall time - Need to specify as the file above does not
sandy.time_offset = datetime.datetime(2012, 10, 29, 8, 0)
sandy.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([rundata.clawdata.lower,
rundata.clawdata.upper,
[np.infty, 0.0, -np.infty],
[0.050, 0.025]])
return rundata
def run_storm_job(first_storm=0,
last_storm=0,
wind_model='holland80',
amr_level=2):
r"""
Setup jobs to run at specific storm start and end.
"""
# Path to file containing log of storms run
path = os.path.join(os.environ.get('DATA_PATH',
os.getcwd()), "square_basin",
"square-basin-storm-%i-%i" % (first_storm, last_storm),
"run_log.txt")
if not os.path.exists(path):
os.makedirs(os.path.dirname(path))
# File to tracy synthetic storm in atcf format
tracy_atcf_path = 'data/tracy_synthetic_atcf.storm'
# Establish a control form of tracy
control = Storm(path=tracy_atcf_path, file_format='ATCF')
control.read_atcf(path=tracy_atcf_path)
# Change tracy to piece wise constant wind curve
u0 = control.max_wind_speed[1]
control.max_wind_speed = piecewise_wind_curve(u0, control.max_wind_speed)
control.write("data/tracy_geoclaw.storm", file_format="geoclaw")
# Get a general storm path
#data_path = os.path.join(os.getcwd(), "../../../data")
#storms_path = os.path.join(data_path, "storms")
#tracks = os.path.join(storms_path, "geoclaw-mumbai-tracks")
tracks = os.path.join(os.getcwd(), "data", "synthetic_storm_files")
num_storms = 1000
#storm_gauges = [(72.811790, 18.936508), (72.972316, 18.997762),
# (72.819311, 18.818044)]
#regions_data = []
#regions_data.append([2, 5, 70, 75, 17, 22])
## Mumbai
#regions_data.append([4, 7, 72.6, 73, 18.80, 19.15])
storm_gauges = None
regions_data = None
num_storms = 1000
with open(path, 'w') as run_log_file:
jobs = []
for n in range(0, num_storms):
storm = copy.copy(control)
mws = copy.copy(control.max_wind_speed)
mws = perturb_wind(mws)
C0 = 218.3784 * numpy.ones(len(mws))
mwr = C0 - 1.2014 * mws + (mws / 10.9884)**2 - (
mws / 35.3052)**3 - 145.5090 * numpy.cos(
control.eye_location[:, 1] * 0.0174533)
storm.max_wind_speed = mws
#storm.max_wind_radius = mwr
# Name storm file and write to log
storm_name = 'SquareBasin_%s.storm' % str(n)
run_log_file.write("%s %s\n" % (n, '%s' % storm_name))
# Add job to queue
jobs.append(
StormJob(run_number=n,
storm_directory=tracks,
storm_object=storm,
wind_model=wind_model,
amr_level=amr_level,
storm_ensemble_type="Synthetic",
region="SquareBasin",
gauges=storm_gauges,
regions=regions_data))
#num_storms = 1
if n == num_storms - 1:
#controller = StormHabaneroBatchController(jobs)
controller = batch.HabaneroBatchController(jobs)
controller.email = '*****@*****.**'
print(controller)
controller.run()
jobs = []
break
return jobs
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
topo_data.topo_missing = -32768
# for topography, append lines of the form
# [topotype, minlevel, maxlevel, t1, t2, fname]
# See regions for control over these regions, need better bathy data for
# the smaller domains
# Entire domain
minlon = rundata.clawdata.lower[0]
maxlon = rundata.clawdata.upper[0]
minlat = rundata.clawdata.lower[1]
maxlat = rundata.clawdata.upper[1]
# ERDDAP Data Access Form call
# ETOPO - 1 arcminute resolution
topo_filename = f'etopo180.esriAscii?altitude[({minlat}):1:({maxlat})][({minlon}):1:({maxlon})]'
topo_url = 'http://coastwatch.pfeg.noaa.gov/erddap/griddap/' + topo_filename
clawutil.data.get_remote_file(topo_url)
topo_path = os.path.join(scratch_dir, topo_filename)
topo_data.topofiles.append(
[3, 1, 5, rundata.clawdata.t0, rundata.clawdata.tfinal, topo_path])
# Caribbean region
# minlat = 9
# maxlat = 28
# minlon = -86
# maxlon = -58
# Break up into two regions
# Caribbean region (NW)
minlat = 16
maxlat = 28
minlon = -86
maxlon = -68
# ERDDAP Data Access Form call
# SRTM15 - 15 arcsecond resolution
# topo_filename = f'srtm15plus.esriAscii?z[({minlat}):1:({maxlat})][({minlon}):1:({maxlon})]'
# GEBCO_2020 Grid - 15 arcsecond resolution
topo_filename = f'GEBCO_2020.esriAscii?elevation[({minlat}):1:({maxlat})][({minlon}):1:({maxlon})]'
topo_url = 'http://coastwatch.pfeg.noaa.gov/erddap/griddap/' + topo_filename
clawutil.data.get_remote_file(topo_url)
topo_path = os.path.join(scratch_dir, topo_filename)
topo_data.topofiles.append([
3, 1, rundata.amrdata.amr_levels_max, rundata.clawdata.t0,
rundata.clawdata.tfinal, topo_path
])
# Caribbean region (SE)
minlat = 9
maxlat = 21
minlon = -69
maxlon = -58
# ERDDAP Data Access Form call
# SRTM15 - 15 arcsecond resolution
# topo_filename = f'srtm15plus.esriAscii?z[({minlat}):1:({maxlat})][({minlon}):1:({maxlon})]'
# GEBCO_2020 Grid - 15 arcsecond resolution
topo_filename = f'GEBCO_2020.esriAscii?elevation[({minlat}):1:({maxlat})][({minlon}):1:({maxlon})]'
topo_url = 'http://coastwatch.pfeg.noaa.gov/erddap/griddap/' + topo_filename
clawutil.data.get_remote_file(topo_url)
topo_path = os.path.join(scratch_dir, topo_filename)
topo_data.topofiles.append([
3, 1, rundata.amrdata.amr_levels_max, rundata.clawdata.t0,
rundata.clawdata.tfinal, topo_path
])
# Virgin Islands High resolution
# # High resolution (1 arcsec / 30m) Virgin Islands topo-bathy (roughly 2^-11 deg)
# VI_highres_filename = 'usvi_1_mhw_2014.nc'
# VI_highres_url = 'https://www.ngdc.noaa.gov/thredds/ncss/regional/' + VI_highres_filename
# clawutil.data.get_remote_file(VI_highres_url)
# # Note: for faster performance, crop this file to 17.5N to 18.5N x -65.1W to -64.3W
# # gdal_translate -projwin -65.1 18.5 -64.3 17.5 usvi_1_mhw_2014.nc usvi_1_mhw_2014_crop.nc
# # Note 2: for even faster performance, subsample to 60m resolution:
# # gdalwarp -tr 0.00056 0.00056 -r cubic usvi_1_mhw_2014_crop.nc usvi_1_mhw_2014_crop_subsample.nc
# # Then update the filename:
# # VI_highres_filename = 'usvi_1_mhw_2014_crop_subsample.nc'
# topo_path = os.path.join(scratch_dir, VI_highres_filename)
# topo_data.topofiles.append([4, 1, 7, rundata.clawdata.t0,
# rundata.clawdata.tfinal,
# topo_path])
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(
os.path.join(os.getcwd(), 'tomas.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2010/bal212010.dat.gz")
atcf_path = os.path.join(scratch_dir, "bal212010.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
storm = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
#ike.time_offset = datetime.datetime(YYYY, MM, DD, HH in UTC)
# "Landfall" for Irma at Virgin Islands was Sept 6, at ~ 18:00 UTC (2pm EST)
# storm.time_offset = datetime.datetime(1979, 9, 6, 18)
# Tomas developed from a tropical wave east of the Windward Islands on October 29
# Data starts at 2010-10-29-06
storm.time_offset = datetime.datetime(2010, 10, 30, 6)
storm.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([
rundata.clawdata.lower, rundata.clawdata.upper,
[np.infty, 0.0, -np.infty], [0.030, 0.022]
])
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0.28
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form
# [topotype, minlevel, maxlevel, t1, t2, fname]
# See regions for control over these regions, need better bathy data for
# the smaller domains
clawutil.data.get_remote_file(
"http://www.columbia.edu/~ktm2132/bathy/gulf_caribbean.tt3.tar.bz2")
topo_path = os.path.join(scratch_dir, 'gulf_caribbean.tt3')
topo_data.topofiles.append(
[3, 1, 5, rundata.clawdata.t0, rundata.clawdata.tfinal, topo_path])
topo = topotools.Topography()
topo.read(topo_path, topo_type=2)
# Create the Flag Region data file
filter_region = (-100, -92, 25, 30)
topotex = topo.crop(filter_region)
pts_chosen = marching_front.select_by_flooding(topotex.Z,
Z1=0,
Z2=15.,
max_iters=None)
Zmasked = ma.masked_array(topotex.Z, np.logical_not(pts_chosen))
pts_chosen = marching_front.select_by_flooding(topotex.Z,
Z1=0,
Z2=1e6,
max_iters=20)
Zmasked = ma.masked_array(topotex.Z, np.logical_not(pts_chosen))
pts_chosen = marching_front.select_by_flooding(topotex.Z,
Z1=0,
Z2=15.,
prev_pts_chosen=pts_chosen,
max_iters=None)
Zmasked = ma.masked_array(topotex.Z, np.logical_not(pts_chosen))
pts_chosen_shallow = marching_front.select_by_flooding(topotex.Z,
Z1=0,
Z2=-15.,
max_iters=None)
Zshallow = ma.masked_array(topotex.Z, np.logical_not(pts_chosen_shallow))
pts_chosen_nearshore = np.logical_and(pts_chosen, pts_chosen_shallow)
Znearshore = ma.masked_array(topotex.Z,
np.logical_not(pts_chosen_nearshore))
fname_fgmax_mask = 'fgmax_pts_topostyle.data'
topo_fgmax_mask = topotools.Topography()
topo_fgmax_mask._x = topotex.x
topo_fgmax_mask._y = topotex.y
topo_fgmax_mask._Z = np.where(pts_chosen_nearshore, 1,
0) # change boolean to 1/0
topo_fgmax_mask.generate_2d_coordinates()
topo_fgmax_mask.write(fname_fgmax_mask, topo_type=3, Z_format='%1i')
rr = region_tools.ruledrectangle_covering_selected_points(
topotex.X,
topotex.Y,
pts_chosen_nearshore,
ixy='y',
method=0,
padding=0,
verbose=True)
xv, yv = rr.vertices()
rr.write('texcoastrr.data')
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(
os.path.join(os.getcwd(), 'harvey.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"http://ftp.nhc.noaa.gov/atcf/archive/2017/bal092017.dat.gz")
atcf_path = os.path.join(scratch_dir, "bal092017.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
open(atcf_path, 'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
# Uncomment/comment out to use the old version of the Ike storm file
# ike = Storm(path="old_ike.storm", file_format="ATCF")
harvey = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (9/13/2008 ~ 7 UTC)
harvey.time_offset = datetime.datetime(2017, 8, 25, 10)
harvey.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([
rundata.clawdata.lower, rundata.clawdata.upper,
[np.infty, 0.0, -np.infty], [0.030, 0.022]
])
# Texas gulf coast
data.friction_regions.append([(-99.2, 26.4), (-94.2, 30.4),
[np.infty, -10.0, -200.0, -np.infty],
[0.030, 0.012, 0.022]])
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.manning_coefficient = 0.025 # Overridden below
geo_data.friction_depth = 1e6
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0.0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 5e-1
refine_data.speed_tolerance = [0.25,0.5,1.0,2.0,3.0,4.0]
refine_data.deep_depth = 2e2
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.test_topography = 2
topo_data.topofiles = []
# Based on approximately 100 km = 1 degree of long
# Based on approximately 110 km = 1 degree of lat
# geodata.x0 = rundata.clawdata.lower[0] + 3.5
# geodata.x1 = rundata.clawdata.lower[0] + 4.5
# geodata.x2 = rundata.clawdata.lower[0] + 4.8
topo_data.x0 = rundata.clawdata.lower[0] + 10
topo_data.x1 = rundata.clawdata.lower[0] + 10.65
topo_data.x2 = rundata.clawdata.lower[0] + 10.85
topo_data.basin_depth = -3000.0
# geodata.basin_depth = -100.0
topo_data.shelf_depth = -200.0
beach_height = 300.0
topo_data.beach_slope = -(beach_height + topo_data.shelf_depth) / (rundata.clawdata.upper[0] - topo_data.x2)
#topo_data.beach_slope = 0.05
# == setqinit.data values ==
rundata.qinit_data.qinit_type = 0
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,\
# ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 2
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(os.path.join(os.getcwd(),
'tracy.storm'))
# Convert ATCF data to GeoClaw format
#clawutil.data.get_remote_file(
# "http://ftp.nhc.noaa.gov/atcf/archive/2008/bal092008.dat.gz")
#atcf_path = os.path.join(scratch_dir, "bal092008.dat")
#atcf_path = os.path.join(os.getcwd(), 'tracy_atcf.storm')
atcf_path = os.path.join(os.getcwd(), 'tracy_atcf_mwrx2.storm')
## Note that the get_remote_file function does not support gzip files which
## are not also tar files. The following code handles this
#with gzip.open(".".join((atcf_path, 'gz')), 'rb') as atcf_file, \
# open(atcf_path, 'w') as atcf_unzipped_file:
# atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
# Uncomment/comment out to use the old version of the Ike storm file
tracy = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# include this info (9/13/2008 ~ 7 UTC)
tracy.time_offset = datetime.datetime(2008, 8, 1, 12)
tracy.write(data.storm_file, file_format='geoclaw')
## Storm parameters, not written out but used to write the tracy.data file
#data.ramp_up_t = days2seconds(RAMP_UP_TIME)
## Convert from 5.0 m/s to degrees/s at lat 25N
#data.velocity = [4.9603e-05, 0.0]
## Assume domain (-90, 20) to (-85, 25) (W and N respectively)
#data.R_eye_init = [-89, 22.5]
#data.A = 23.0
#data.B = 1.5
#data.Pc = 950.0 * 1e2 # Have to convert this to Pa instead of millibars
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([rundata.clawdata.lower,
rundata.clawdata.upper,
[np.infty,0.0,-np.infty],
[0.030, 0.022]])
return rundata
def setgeo(rundata):
"""
Set GeoClaw specific runtime parameters.
For documentation see ....
"""
geo_data = rundata.geo_data
# == Physics ==
geo_data.gravity = 9.81
geo_data.coordinate_system = 2
geo_data.earth_radius = 6367.5e3
geo_data.rho = 1025.0
geo_data.rho_air = 1.15
geo_data.ambient_pressure = 101.3e3
# == Forcing Options
geo_data.coriolis_forcing = True
geo_data.friction_forcing = True
geo_data.friction_depth = 1e10
# == Algorithm and Initial Conditions ==
# Due to seasonal swelling of gulf we set sea level higher
geo_data.sea_level = 0.0
geo_data.dry_tolerance = 1.e-2
# Refinement Criteria
refine_data = rundata.refinement_data
refine_data.wave_tolerance = 1.0
refine_data.speed_tolerance = [1.0, 2.0, 3.0, 4.0]
refine_data.deep_depth = 300.0
refine_data.max_level_deep = 4
refine_data.variable_dt_refinement_ratios = True
# == settopo.data values ==
topo_data = rundata.topo_data
topo_data.topofiles = []
# for topography, append lines of the form:[topotype, minlevel, maxlevel, t1, t2, fname]
# See regions for control over these regions, need better bathy data for the smaller domains
# !!!!!!!!!!!!!!!!NEED TO MODIFY PATH HERE IF TESTING EXAMPLE!!!!!!!!!!!!!
topo_path = os.path.join(
"/home/socoyjonathan/clawpack_src/clawpack-v5.7.1/geoclaw/topograpy",
"topography.asc")
topo_data.topofiles.append(
[3, 1, 5, rundata.clawdata.t0, rundata.clawdata.tfinal, topo_path])
# == setfixedgrids.data values ==
rundata.fixed_grid_data.fixedgrids = []
# for fixed grids append lines of the form
# [t1,t2,noutput,x1,x2,y1,y2,xpoints,ypoints,ioutarrivaltimes,ioutsurfacemax]
# ================
# Set Surge Data
# ================
data = rundata.surge_data
# Source term controls
data.wind_forcing = True
data.drag_law = 1
data.pressure_forcing = True
data.display_landfall_time = True
# AMR parameters, m/s and m respectively
data.wind_refine = [20.0, 40.0, 60.0]
data.R_refine = [60.0e3, 40e3, 20e3]
# Storm parameters - Parameterized storm (Holland 1980)
data.storm_specification_type = 'holland80' # (type 1)
data.storm_file = os.path.expandvars(
os.path.join(os.getcwd(), 'ophelia.storm'))
# Convert ATCF data to GeoClaw format
clawutil.data.get_remote_file(
"https://ftp.nhc.noaa.gov/atcf/archive/2017/bal172017.dat.gz")
atcf_path = os.path.join(scratch_dir, "bal172017.dat")
# Note that the get_remote_file function does not support gzip files which
# are not also tar files. The following code handles this
with gzip.open(".".join((atcf_path, 'gz')),
'rb') as atcf_file, open(atcf_path,
'w') as atcf_unzipped_file:
atcf_unzipped_file.write(atcf_file.read().decode('ascii'))
# ophelia = Storm(path="old_ophelia.storm", file_format="ATCF")
ophelia = Storm(path=atcf_path, file_format="ATCF")
# Calculate landfall time - Need to specify as the file above does not
# Ophelia landfall: 10/16/2017 ~ 1100 UTC
ophelia.time_offset = datetime.datetime(2017, 10, 16, 11)
ophelia.write(data.storm_file, file_format='geoclaw')
# =======================
# Set Variable Friction
# =======================
data = rundata.friction_data
# Variable friction
data.variable_friction = True
# Region based friction
# Entire domain
data.friction_regions.append([
rundata.clawdata.lower, rundata.clawdata.upper,
[np.infty, 0.0, -np.infty], [0.030, 0.022]
])
# UK
data.friction_regions.append([(-10.5, 51.5), (0, 60),
[np.infty, -10.0, -200.0, -np.infty],
[0.030, 0.012, 0.022]])
return rundata