def set_plotdata(self):
from clawpack.visclaw import data
from clawpack.visclaw import frametools
plotdata = data.ClawPlotData()
plotdata.setplot = self.setplot
self.plotdata = frametools.call_setplot(self.setplot, plotdata)
plotdata._mode = 'iplotclaw'
def __init__(self, setplot='setplot.py', outdir=None, \
completekey='tab', stdin=None, stdout=None):
"""Instantiate a line-oriented interpreter framework.
The optional argument 'completekey' is the readline name of a
completion key; it defaults to the Tab key. If completekey is
not None and the readline module is available, command completion
is done automatically. The optional arguments stdin and stdout
specify alternate input and output file objects; if not specified,
sys.stdin and sys.stdout are used.
"""
import sys
if stdin is not None:
self.stdin = stdin
else:
self.stdin = sys.stdin
if stdout is not None:
self.stdout = stdout
else:
self.stdout = sys.stdout
self.cmdqueue = []
self.completekey = completekey
self.setplot = setplot
plotdata = data.ClawPlotData()
plotdata.setplot = self.setplot
plotdata._mode = 'iplotclaw'
if outdir is None:
try:
# possibly set by 'make .output' and stored in .output:
dot_output = open('.output', 'r')
outdir = dot_output.readline().strip()
dot_output.close()
except:
outdir = '.'
plotdata.outdir = outdir
# Note also that outdir might be reset by setplot!
try:
plotdata = frametools.call_setplot(self.setplot, plotdata)
except:
print '*** Problem executing setplot in Iplotclaw'
#print ' plotdata = ', plotdata
print ' setplot = ', self.setplot
print '*** Either this file does not exist or '
print ' there is a problem executing the function setplot in this file.'
print '*** PLOT PARAMETERS MAY NOT BE SET! ***'
raise
#return
self.plotdata = plotdata
self.prevplotdata = plotdata
self.restart = False
self.prevframeno = 0
def setup():
# Create plotdata object for reading in gauges in tests below:
global plotdata
global olddir
plotdata = data.ClawPlotData()
plotdata.outdir = '_output'
# Now set current working directory to regression_tests.py
olddir = os.getcwd()
testdir = os.path.abspath(os.path.dirname(__file__))
os.chdir(testdir)
def plot_contour(data_dir="./_output",
out_dir='./',
num_layers=2,
num_frames=1000,
ref_lines=[-130e3, -30e3],
color=True):
"""Plot a contour plot of a shelf based simluation"""
# Create plot data
plot_data = data.ClawPlotData()
plot_data.outdir = data_dir
# Read in bathymetry
sol = [Solution(0, path=data_dir, read_aux=True)]
b = sol[0].state.aux[0, :]
# Extract x coordinates, this assumes that these do not change through the
# simluation (they should not)
x = sol[0].state.grid.dimensions[0].centers
# Read in all solutions
print "Reading in solutions..."
for frame in xrange(1, num_frames):
try:
sol.append(Solution(frame, path=data_dir))
except IOError:
# We have reached the last frame before given num_frames reached
num_frames = frame - 1
break
print "Found %s frames to plot." % num_frames
# Create plotting arrays
print "Constructing plotting variables..."
eta = np.ndarray((num_frames, num_layers, len(x)))
t = np.ndarray((num_frames))
for frame in xrange(num_frames):
# Append data to eta and t lists
t[frame] = sol[frame].t / 3600.0
# Calculate from the bottom up
layer_index = 2 * (num_layers - 1)
eta[frame,
num_layers - 1, :] = sol[frame].q[layer_index, :] / rho[-1] + b
# Calculate the rest of the layers
for layer in xrange(num_layers - 2, -1, -1):
layer_index = 2 * layer
eta[frame,
layer, :] = sol[frame].q[layer_index, :] / rho[layer] + eta[
frame, layer + 1, :]
# Create mesh grid for plot
X, T = np.meshgrid(x, t)
# Plot the contours of each layer
clines = np.linspace(.025, .4, 8)
title = ['top', 'internal']
print "Creating plots..."
fig = plt.figure(figsize=[10, 8])
for layer in xrange(num_layers):
axes = fig.add_subplot(1, num_layers, layer + 1)
# Plot positive and negative contours
eta_plot = eta[:, layer, :] - eta_init[layer]
plot = axes.contour(X, T, eta_plot, clines, colors='r')
plot = axes.contour(X, T, eta_plot, -clines, colors='b')
for ref_line in ref_lines:
axes.plot([ref_line, ref_line], [0, 2], 'k:')
# X ticks and labels
axes.set_xticks([-300e3, -200e3, -100e3, -30e3])
axes.set_xticklabels([300, 200, 100, 30], fontsize=15)
axes.set_xlabel("Kilometers offshore", fontsize=15)
axes.set_xlim([-200e3, 0.0])
# First plot from left to right, write y ticks
if layer == 0:
plt.yticks(fontsize=15)
axes.set_ylabel("Hours", fontsize=20)
else:
# Remove tick labels
axes.set_yticklabels(['' for label in axes.get_yticklabels()])
axes.set_title("Contours of %s surface" % title[layer], fontsize=15)
file_name = os.path.join(out_dir, "contour.png")
print "Writing out to %s" % file_name
plt.savefig(file_name)