Python run_phyml Examples

Example #1

File: codemlp.py Project: jwayne/mol455

 def _check_boot_trees():
     if not self.inputs['boot_trees']:
         _check_prots_aln()
         _, self.inputs['boot_trees'] = run_phyml(self.inputs['prots_aln'], self.n_bootstrap)

Example #2

File: codemlp.py Project: jwayne/mol455

 def _check_tree():
     if not self.inputs['tree']:
         _check_prots_aln()
         self.inputs['tree'], _ = run_phyml(self.inputs['prots_aln'], self.n_bootstrap)