Python get_latest_release Examples

Example #1

    def __init__(self, Species, Release, account=None, pool_recycle=None):
        super(Genome, self).__init__()

        assert Release, 'invalid release specified'
        if account is None:
            account = get_ensembl_account(release=Release)

        self._account = account
        self._pool_recycle = pool_recycle

        # TODO: check Release may not be necessary because: assert Release above
        if Release is None:
            Release = get_latest_release(account=account)

        self._gen_release = None

        # TODO make name and release immutable properties
        self.Species = _Species.getSpeciesName(Species)
        self.Release = str(Release)

        # the db connections
        self._core_db = None
        self._var_db = None
        self._other_db = None
        self._feature_type_ids = FeatureTypeCache(self)
        self._feature_coord_levels = FeatureCoordLevels(self.Species)

Example #2

File: genome.py Project: miklou/pycogent

 def __init__(self, Species, Release, account=None, pool_recycle=None):
     super(Genome, self).__init__()
     
     assert Release, 'invalid release specified'
     if account is None:
         account = get_ensembl_account(release=Release)
     
     self._account = account
     self._pool_recycle = pool_recycle
     
     # TODO: check Release may not be necessary because: assert Release above
     if Release is None:
         Release = get_latest_release(account=account)
     
     self._gen_release = None
     
     # TODO make name and release immutable properties
     self.Species = _Species.getSpeciesName(Species)
     self.Release = str(Release)
     
     # the db connections
     self._core_db = None
     self._var_db = None
     self._other_db = None
     self._feature_type_ids = FeatureTypeCache(self)
     self._feature_coord_levels = FeatureCoordLevels(self.Species)

Example #3

File: test_host.py Project: adamrp/pycogent

 def test_latest_release_number(self):
     """should correctly the latest release number"""
     self.assertGreaterThan(get_latest_release(), "53")

Example #4

File: test_host.py Project: mikerobeson/pycogent

 def test_latest_release_number(self):
     """should correctly the latest release number"""
     self.assertGreaterThan(get_latest_release(), "53")