Python get_chains Examples

Example #1

 def test_get_chains_protein(self):
     """Tests for get_chains function using protein pdb lines.
     """
     chains_prot = get_chains(TEST_PDB_STRING_2.split('\n'))
     self.assertEqual(chains_prot, self.test_pdb_chains_2)

Example #2

File: test_pdb_color.py Project: miklou/pycogent

 def test_get_chains_protein(self):
     """Tests for get_chains function using protein pdb lines.
     """    
     chains_prot = get_chains(TEST_PDB_STRING_2.split('\n'))
     self.assertEqual(chains_prot, self.test_pdb_chains_2)

Example #3

 def test_get_chains_nucleotide(self):
     """Tests for get_chains function using nucleotide pdb lines.
     """
     chains_nuc = get_chains(TEST_PDB_STRING_1.split('\n'))
     self.assertEqual(chains_nuc, self.test_pdb_chains_1)

Example #4

File: test_pdb_color.py Project: miklou/pycogent

 def test_get_chains_nucleotide(self):
     """Tests for get_chains function using nucleotide pdb lines.
     """
     chains_nuc = get_chains(TEST_PDB_STRING_1.split('\n'))
     self.assertEqual(chains_nuc, self.test_pdb_chains_1)