# Ratio images
# 2 corresponds to the first mass image (e.g. mass 26.0)
# 3 corresponds to the second mass image (e.g. mass 27.0)
ratioProps2 = RatioProps(3, 2)
mp2 = MimsPlus(ui, ratioProps2)
imageArray.add(mp2)
IJ.log("Opening ratio: "+mp2.getTitle())
images = jarray.zeros(imageArray.size(), MimsPlus)
images = imageArray.toArray(images)
#////////////////////////////
# Create and display table.
#////////////////////////////
table = MimsJTable(ui)
table.setStats(stats)
table.setRois(rois)
table.setImages(images)
table.setPlanes(planes)
#append=false
nPlanes = ui.getOpener().getNImages()
if nPlanes > 1:
table.createTable(False)
else:
table.createSumTable(False)
#table.showFrame();
IJ.log("Writing: "+imDirName+"/"+ui.getImageFilePrefix()+"_data.csv")
table.writeData(File(imDirName, ui.getImageFilePrefix()+"_data.csv"))
table.close()
IJ.log("")
# Ratio images
# 2 corresponds to the first mass image (e.g. mass 26.0)
# 3 corresponds to the second mass image (e.g. mass 27.0)
ratioProps2 = RatioProps(3, 2)
mp2 = MimsPlus(ui, ratioProps2)
imageArray.add(mp2)
IJ.log("Opening ratio: " + mp2.getTitle())
images = jarray.zeros(imageArray.size(), MimsPlus)
images = imageArray.toArray(images)
#////////////////////////////
# Create and display table.
#////////////////////////////
table = MimsJTable(ui)
table.setStats(stats)
table.setRois(rois)
table.setImages(images)
table.setPlanes(planes)
#append=false
nPlanes = ui.getOpener().getNImages()
if nPlanes > 1:
table.createTable(False)
else:
table.createSumTable(False)
#table.showFrame();
csvFileName = os.path.join(imDirName,
ui.getImageFilePrefix() + "_data.csv")
if os.path.exists(csvFileName):
# Ratio images
# 2 corresponds to the first mass image (e.g. mass 26.0)
# 3 corresponds to the second mass image (e.g. mass 27.0)
ratioProps2 = RatioProps(3, 2)
mp2 = MimsPlus(ui, ratioProps2)
imageArray.add(mp2)
IJ.log("Opening ratio: "+mp2.getTitle())
images = jarray.zeros(imageArray.size(), MimsPlus)
images = imageArray.toArray(images)
#////////////////////////////
# Create and display table.
#////////////////////////////
table = MimsJTable(ui)
table.setStats(stats)
table.setRois(rois)
table.setImages(images)
table.setPlanes(planes)
#append=false
nPlanes = ui.getOpener().getNImages()
if nPlanes > 1:
table.createTable(False)
else:
table.createSumTable(False)
#table.showFrame();
csvFileName = os.path.join(imDirName, ui.getImageFilePrefix()+"_data.csv")
if os.path.exists(csvFileName):
IJ.log("ERROR: file" + csvFileName + " exists. Skipping.")
