class UserData(BaseStudyUserData):
"""
Represents the user data for one PGP participant.
"""
class Meta: # noqa: D101
verbose_name = 'PGP user data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
def get_retrieval_params(self):
try:
return {'hu_id': HuId.objects.filter(user_data=self)[0].id}
except IndexError:
return {}
@property
def has_key_data(self):
"""
Return false if key data needed for data retrieval is not present.
"""
if self.is_connected:
try:
HuId.objects.get(user_data=self)
return True
except HuId.DoesNotExist:
return False
return False
class UserData(BaseStudyUserData):
"""
Represents the user data for one American Gut participant.
"""
class Meta: # noqa: D101
verbose_name = 'American Gut user data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
@property
def survey_ids(self):
try:
return self.data.get('surveyIds', [])
except AttributeError:
return []
@property
def has_key_data(self):
"""
Return false if key data needed for data retrieval is not present.
"""
return self.is_connected and self.survey_ids
class UserData(models.Model):
"""
Used as key when a User has DataFiles for Genome and Exome Data.
"""
class Meta: # noqa: D101
verbose_name = 'Genome and exome data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
def __unicode__(self):
return '%s:%s' % (self.user, 'Genome and Exome data')
def vcf_data(self):
return self.vcfdata_set.all()
@property
def is_connected(self):
return self.vcf_data()
def disconnect(self):
vcf_data = self.vcf_data()
vcf_data.delete()
def get_retrieval_params(self):
return {'vcf_data': [s.as_dict() for s in self.vcf_data()]}
class UserData(models.Model):
"""
Used as key when a User has DataFiles for the AncestryDNA activity.
"""
class Meta: # noqa: D101
verbose_name = 'AncestryDNA user data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
genome_file = models.FileField(upload_to=get_upload_path,
max_length=1024,
null=True)
def __unicode__(self):
return '%s:%s' % (self.user, 'AncestryDNA')
@property
def file_url(self):
try:
return self.genome_file.url
except ValueError:
return ''
@property
def is_connected(self):
return self.file_url
def disconnect(self):
self.genome_file.delete()
def get_retrieval_params(self):
return {'file_url': self.file_url}
class UserData(models.Model):
"""
Used as key when a User has DataFiles for the uBiome activity.
"""
class Meta: # noqa: D101
verbose_name = 'uBiome user data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
def __unicode__(self):
return '%s:%s' % (self.user, 'uBiome')
def samples(self):
return self.ubiomesample_set.all()
@property
def is_connected(self):
return self.samples()
def disconnect(self):
samples = self.samples()
samples.delete()
def get_retrieval_params(self):
return {'samples': [s.as_dict() for s in self.samples()]}
class TestUserData(models.Model):
"""
Used for unit tests in public_data.tests; there's not currently a way to
make test-specific model definitions in Django (a bug open since 2009,
#7835)
"""
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name='test_user_data')
class UserData(BaseStudyUserData):
"""
Represents the user data for one Wildlife of Our Homes participant.
"""
class Meta: # noqa: D101
verbose_name = 'Wildlife of Our Homes user data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
@property
def has_key_data(self):
"""
Return false if key data needed for data retrieval is not present.
"""
return self.is_connected and self.data
class UserData(models.Model):
"""
Used as key when a User has DataFiles for the data_selfie activity.
"""
class Meta: # noqa: D101
verbose_name = 'data selfie user data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
seen_page = models.BooleanField(default=False)
def __unicode__(self):
return '%s:%s' % (self.user, 'data_selfie')
@property
def is_connected(self):
return DataSelfieDataFile.objects.filter(user=self.user).count() > 0
@staticmethod
def get_retrieval_params():
return {}
class UserData(models.Model):
"""
Used as key when a User has DataFiles for the 23andme activity.
"""
class Meta: # noqa: D101
verbose_name = '23andMe user data'
verbose_name_plural = verbose_name
user = fields.AutoOneToOneField(settings.AUTH_USER_MODEL,
related_name=label)
# As of Feb 2016, DropzoneS3UploadFormView overrides the upload_to.
# Maintaining with same path in case we someday get non-Dropzone files.
genome_file = models.FileField(upload_to=get_upload_path, max_length=1024,
null=True)
def __unicode__(self):
return '%s:%s' % (self.user, '23andme')
@property
def file_url(self):
try:
return self.genome_file.url
except ValueError:
return ''
@property
def is_connected(self):
return self.file_url
def disconnect(self):
self.genome_file.delete()
def get_retrieval_params(self):
return {'file_url': self.file_url}