import os
from compmake.jobs import top_targets, tree
from compmake.jobs.storage import get_job_cache
from compmake.structures import UserError, Cache
from compmake.ui.helpers import ui_section, VISUALIZATION, ui_command
from compmake.utils import info
from compmake.jobs.queries import direct_children
ui_section(VISUALIZATION)
@ui_command
def graph(job_list, filename='compmake', compact=0,
filter='dot', format='png'):
'''Creates a graph of the given targets and dependencies
graph filename=filename compact=0,1 format=png,...
Params:
filename: name of generated filename in the dot format
compact=0: whether to include the job names in the nodes
filter=[dot,circo,twopi,...] which algorithm to use to arrange
the nodes. This depends on the topology of your
computation. The default is 'dot'
(hierarchy top-bottom).
format=[png,...] The output file format.
'''
if not job_list:
job_list = top_targets()
import cPickle as pickle, os
from compmake.utils import info, user_error
from compmake.ui.helpers import INPUT_OUTPUT, ui_section, ui_command
from compmake.jobs.storage import \
get_job_userobject, is_job_userobject_available
ui_section(INPUT_OUTPUT)
@ui_command
def dump(non_empty_job_list, directory='.'):
'''Dumps the content of jobs as pickle files.
Arguments:
directory='.' where to dump the files
'''
for job_id in non_empty_job_list:
if is_job_userobject_available(job_id):
user_object = get_job_userobject(job_id)
filename = os.path.join(directory, job_id + '.pickle')
with open(filename, 'w') as f:
pickle.dump(user_object, f)
info('Wrote %s' % filename)
else:
user_error('Job %s is not ready yet.' % job_id)