def __init__(self, parent=None, data=None):
super(DialogKKOptions, self).__init__(parent) ### EDIT ###
self.ui = Ui_KKOptions() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.doubleSpinBoxCARSAmp.setValue(self.CARS_AMP)
self.ui.doubleSpinBoxNRBAmp.setValue(self.NRB_AMP)
self.ui.doubleSpinBoxPhase.setValue(self.PHASE_OFFSET)
self.ui.checkBoxNormToNRB.setChecked(self.NORM_TO_NRB)
self.ui.spinBoxPadFactor.setValue(self.PAD_FACTOR)
self.norm_to_nrb = self.NORM_TO_NRB
self.data = data
if data is None:
self.ui.pushButtonInteractive.setEnabled(False)
else:
self.ui.pushButtonInteractive.pressed.connect(self.goInteractive)
def __init__(self, parent=None, data=None):
super(DialogKKOptions, self).__init__(parent) ### EDIT ###
self.ui = Ui_KKOptions() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.doubleSpinBoxCARSAmp.setValue(self.CARS_AMP)
self.ui.doubleSpinBoxNRBAmp.setValue(self.NRB_AMP)
self.ui.doubleSpinBoxPhase.setValue(self.PHASE_OFFSET)
self.ui.checkBoxNormToNRB.setChecked(self.NORM_TO_NRB)
self.ui.spinBoxPadFactor.setValue(self.PAD_FACTOR)
self.norm_to_nrb = self.NORM_TO_NRB
self.data = data
if data is None:
self.ui.pushButtonInteractive.setEnabled(False)
else:
self.ui.pushButtonInteractive.pressed.connect(self.goInteractive)
class DialogKKOptions(_QDialog):
"""
DialogKKOptions : Phase-Retrieval (only Kramers-Kronig currently \
supported) options dialog
Static Method
-------------
dialogKKOptions : Used to call UI and retrieve results of dialog
References
----------
[1] Y. Liu, Y. J. Lee, and M. T. Cicerone, "Broadband CARS spectral \
phase retrieval using a time-domain Kramers-Kronig transform," \
Opt. Lett. 34, 1363-1365 (2009).
[2] C H Camp Jr, Y J Lee, and M T Cicerone, "Quantitative, Comparable Coherent \
Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase \
Retrieval," Journal of Raman Spectroscopy (2016). arXiv:1507.06543.
Software Info
--------------
Original Python branch: Feb 16 2015
author: ("Charles H Camp Jr")
email: ("*****@*****.**")
version: ("16.2.16")
"""
NORM_TO_NRB = True
NRB_AMP = 0.0
CARS_AMP = 0.0
PHASE_OFFSET = 0.0
PAD_FACTOR = 1
def __init__(self, parent=None, data=None):
super(DialogKKOptions, self).__init__(parent) ### EDIT ###
self.ui = Ui_KKOptions() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.doubleSpinBoxCARSAmp.setValue(self.CARS_AMP)
self.ui.doubleSpinBoxNRBAmp.setValue(self.NRB_AMP)
self.ui.doubleSpinBoxPhase.setValue(self.PHASE_OFFSET)
self.ui.checkBoxNormToNRB.setChecked(self.NORM_TO_NRB)
self.ui.spinBoxPadFactor.setValue(self.PAD_FACTOR)
self.norm_to_nrb = self.NORM_TO_NRB
self.data = data
if data is None:
self.ui.pushButtonInteractive.setEnabled(False)
else:
self.ui.pushButtonInteractive.pressed.connect(self.goInteractive)
def goInteractive(self):
plugin = _widgetKK()
winPlotEffect = _DialogPlotEffect.dialogPlotEffect(self.data[1:],
x=self.data[0],
plugin=plugin,
parent=self)
if winPlotEffect is not None:
self.ui.doubleSpinBoxCARSAmp.setValue(winPlotEffect.parameters['cars_amp_offset'])
self.ui.doubleSpinBoxNRBAmp.setValue(winPlotEffect.parameters['nrb_amp_offset'])
self.ui.checkBoxNormToNRB.setChecked(winPlotEffect.parameters['norm_to_nrb'])
self.ui.doubleSpinBoxPhase.setValue(winPlotEffect.parameters['phase_offset'])
self.ui.spinBoxPadFactor.setValue(winPlotEffect.parameters['pad_factor'])
@staticmethod
def dialogKKOptions(parent=None, data=None):
"""
Static Method.
Retrieve dark subtraction dialog results
Inputs
----------
None : None
Returns
----------
out : dict{'cars_amp' : float, 'nrb_amp' : float,
'phase_offset' : float, 'norm_to_nrb' : bool,
'pad_factor' : int}
In order: CARS amp offset, NRB amp offset, phase offset, normalize
by NRB, pad factor
"""
dialog = DialogKKOptions(parent=parent,data=data)
result = dialog.exec_()
if result == 1:
ret = {}
ret['cars_amp'] = dialog.ui.doubleSpinBoxCARSAmp.value()
ret['nrb_amp'] = dialog.ui.doubleSpinBoxNRBAmp.value()
ret['phase_offset'] = dialog.ui.doubleSpinBoxPhase.value()
ret['norm_to_nrb'] = dialog.ui.checkBoxNormToNRB.isChecked()
ret['pad_factor'] = dialog.ui.spinBoxPadFactor.value()
return ret
else:
return None
class DialogKKOptions(_QDialog):
"""
DialogKKOptions : Phase-Retrieval (only Kramers-Kronig currently \
supported) options dialog
Methods
--------
dialogKKOptions : Used to call UI and retrieve results of dialog
References
----------
[1] Y. Liu, Y. J. Lee, and M. T. Cicerone, "Broadband CARS spectral \
phase retrieval using a time-domain Kramers-Kronig transform," \
Opt. Lett. 34, 1363-1365 (2009).
[2] C H Camp Jr, Y J Lee, and M T Cicerone, "Quantitative, Comparable Coherent \
Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase \
Retrieval," Journal of Raman Spectroscopy (2016). arXiv:1507.06543.
"""
NORM_TO_NRB = True
NRB_AMP = 0.0
CARS_AMP = 0.0
PHASE_OFFSET = 0.0
PAD_FACTOR = 1
def __init__(self, parent=None, data=None):
super(DialogKKOptions, self).__init__(parent) ### EDIT ###
self.ui = Ui_KKOptions() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.doubleSpinBoxCARSAmp.setValue(self.CARS_AMP)
self.ui.doubleSpinBoxNRBAmp.setValue(self.NRB_AMP)
self.ui.doubleSpinBoxPhase.setValue(self.PHASE_OFFSET)
self.ui.checkBoxNormToNRB.setChecked(self.NORM_TO_NRB)
self.ui.spinBoxPadFactor.setValue(self.PAD_FACTOR)
self.ui.checkBoxNormToNRB.stateChanged.connect(self.checkBoxNormToNRB)
self.norm_to_nrb = self.NORM_TO_NRB
self.data = data
if data is None:
self.ui.pushButtonInteractive.setEnabled(False)
else:
self.ui.pushButtonInteractive.pressed.connect(self.goInteractive)
def checkBoxNormToNRB(self):
if self.ui.checkBoxNormToNRB.isChecked() == True:
self.norm_to_nrb = True
else:
self.norm_to_nrb = False
def goInteractive(self):
plugin = _widgetKK()
winPlotEffect = _DialogPlotEffect.dialogPlotEffect(self.data, x=self.data[0], plugin=plugin, xlabel='Wavenumber (cm$^{-1}$)', ylabel='Imag. {$\chi_R$} (au)')
if winPlotEffect is not None:
self.ui.doubleSpinBoxCARSAmp.setValue(winPlotEffect.cars_bias)
self.ui.doubleSpinBoxNRBAmp.setValue(winPlotEffect.nrb_bias)
self.ui.checkBoxNormToNRB.setChecked(winPlotEffect.nrb_norm)
self.ui.doubleSpinBoxPhase.setValue(winPlotEffect.phaselin)
self.ui.spinBoxPadFactor.setValue(winPlotEffect.pad_factor)
@staticmethod
def dialogKKOptions(parent=None, data=None):
"""
Retrieve dark subtraction dialog results
Parameters
----------
None : None
Returns
----------
out : (tuple)
HSData amp offset : (float)
NRB amp offset : (float)
Phase offset : (float)
Normalize by NRB : (bool)
Pad factor : (int)
"""
dialog = DialogKKOptions(parent=parent,data=data)
result = dialog.exec_()
if result == 1:
return (dialog.ui.doubleSpinBoxCARSAmp.value(),
dialog.ui.doubleSpinBoxNRBAmp.value(),
dialog.ui.doubleSpinBoxPhase.value(),
dialog.norm_to_nrb,
dialog.ui.spinBoxPadFactor.value())
else:
return (None, None, None, None, None)
class DialogKKOptions(_QDialog):
"""
DialogKKOptions : Phase-Retrieval (only Kramers-Kronig currently \
supported) options dialog
Static Method
-------------
dialogKKOptions : Used to call UI and retrieve results of dialog
References
----------
[1] Y. Liu, Y. J. Lee, and M. T. Cicerone, "Broadband CARS spectral \
phase retrieval using a time-domain Kramers-Kronig transform," \
Opt. Lett. 34, 1363-1365 (2009).
[2] C H Camp Jr, Y J Lee, and M T Cicerone, "Quantitative, Comparable Coherent \
Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase \
Retrieval," Journal of Raman Spectroscopy (2016). arXiv:1507.06543.
Software Info
--------------
Original Python branch: Feb 16 2015
author: ("Charles H Camp Jr")
email: ("*****@*****.**")
version: ("16.2.16")
"""
NORM_TO_NRB = True
NRB_AMP = 0.0
CARS_AMP = 0.0
PHASE_OFFSET = 0.0
PAD_FACTOR = 1
def __init__(self, parent=None, data=None):
super(DialogKKOptions, self).__init__(parent) ### EDIT ###
self.ui = Ui_KKOptions() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.doubleSpinBoxCARSAmp.setValue(self.CARS_AMP)
self.ui.doubleSpinBoxNRBAmp.setValue(self.NRB_AMP)
self.ui.doubleSpinBoxPhase.setValue(self.PHASE_OFFSET)
self.ui.checkBoxNormToNRB.setChecked(self.NORM_TO_NRB)
self.ui.spinBoxPadFactor.setValue(self.PAD_FACTOR)
self.ui.checkBoxNormToNRB.stateChanged.connect(self.checkBoxNormToNRB)
self.norm_to_nrb = self.NORM_TO_NRB
self.data = data
if data is None:
self.ui.pushButtonInteractive.setEnabled(False)
else:
self.ui.pushButtonInteractive.pressed.connect(self.goInteractive)
def checkBoxNormToNRB(self):
if self.ui.checkBoxNormToNRB.isChecked() == True:
self.norm_to_nrb = True
else:
self.norm_to_nrb = False
def goInteractive(self):
plugin = _widgetKK()
winPlotEffect = _DialogPlotEffect.dialogPlotEffect(
self.data,
x=self.data[0],
plugin=plugin,
xlabel='Wavenumber (cm$^{-1}$)',
ylabel='Imag. {$\chi_R$} (au)')
if winPlotEffect is not None:
self.ui.doubleSpinBoxCARSAmp.setValue(winPlotEffect.cars_bias)
self.ui.doubleSpinBoxNRBAmp.setValue(winPlotEffect.nrb_bias)
self.ui.checkBoxNormToNRB.setChecked(winPlotEffect.nrb_norm)
self.ui.doubleSpinBoxPhase.setValue(winPlotEffect.phaselin)
self.ui.spinBoxPadFactor.setValue(winPlotEffect.pad_factor)
@staticmethod
def dialogKKOptions(parent=None, data=None):
"""
Static Method.
Retrieve dark subtraction dialog results
Inputs
----------
None : None
Returns
----------
out : (tuple)
HSData amp offset : (float)
NRB amp offset : (float)
Phase offset : (float)
Normalize by NRB : (bool)
Pad factor : (int)
"""
dialog = DialogKKOptions(parent=parent, data=data)
result = dialog.exec_()
if result == 1:
return (dialog.ui.doubleSpinBoxCARSAmp.value(),
dialog.ui.doubleSpinBoxNRBAmp.value(),
dialog.ui.doubleSpinBoxPhase.value(), dialog.norm_to_nrb,
dialog.ui.spinBoxPadFactor.value())
else:
return (None, None, None, None, None)
class DialogKKOptions(_QDialog):
"""
DialogKKOptions : Phase-Retrieval (only Kramers-Kronig currently \
supported) options dialog
Methods
--------
dialogKKOptions : Used to call UI and retrieve results of dialog
References
----------
[1] Y. Liu, Y. J. Lee, and M. T. Cicerone, "Broadband CARS spectral \
phase retrieval using a time-domain Kramers-Kronig transform," \
Opt. Lett. 34, 1363-1365 (2009).
[2] C H Camp Jr, Y J Lee, and M T Cicerone, "Quantitative, Comparable Coherent \
Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase \
Retrieval," Journal of Raman Spectroscopy (2016). arXiv:1507.06543.
"""
NORM_TO_NRB = True
NRB_AMP = 0.0
CARS_AMP = 0.0
PHASE_OFFSET = 0.0
PAD_FACTOR = 1
def __init__(self, parent=None, data=None):
super(DialogKKOptions, self).__init__(parent) ### EDIT ###
self.ui = Ui_KKOptions() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.doubleSpinBoxCARSAmp.setValue(self.CARS_AMP)
self.ui.doubleSpinBoxNRBAmp.setValue(self.NRB_AMP)
self.ui.doubleSpinBoxPhase.setValue(self.PHASE_OFFSET)
self.ui.checkBoxNormToNRB.setChecked(self.NORM_TO_NRB)
self.ui.spinBoxPadFactor.setValue(self.PAD_FACTOR)
self.norm_to_nrb = self.NORM_TO_NRB
self.data = data
if data is None:
self.ui.pushButtonInteractive.setEnabled(False)
else:
self.ui.pushButtonInteractive.pressed.connect(self.goInteractive)
def goInteractive(self):
plugin = _widgetKK()
winPlotEffect = _DialogPlotEffect.dialogPlotEffect(self.data[1:],
x=self.data[0],
plugin=plugin,
parent=self)
if winPlotEffect is not None:
self.ui.doubleSpinBoxCARSAmp.setValue(winPlotEffect.parameters['cars_amp_offset'])
self.ui.doubleSpinBoxNRBAmp.setValue(winPlotEffect.parameters['nrb_amp_offset'])
self.ui.checkBoxNormToNRB.setChecked(winPlotEffect.parameters['norm_to_nrb'])
self.ui.doubleSpinBoxPhase.setValue(winPlotEffect.parameters['phase_offset'])
self.ui.spinBoxPadFactor.setValue(winPlotEffect.parameters['pad_factor'])
@staticmethod
def dialogKKOptions(parent=None, data=None):
"""
Retrieve dark subtraction dialog results
Parameters
----------
None : None
Returns
----------
out : dict{'cars_amp' : float, 'nrb_amp' : float,
'phase_offset' : float, 'norm_to_nrb' : bool,
'pad_factor' : int}
In order: CARS amp offset, NRB amp offset, phase offset, normalize
by NRB, pad factor
"""
dialog = DialogKKOptions(parent=parent,data=data)
result = dialog.exec_()
if result == 1:
ret = {}
ret['cars_amp'] = dialog.ui.doubleSpinBoxCARSAmp.value()
ret['nrb_amp'] = dialog.ui.doubleSpinBoxNRBAmp.value()
ret['phase_offset'] = dialog.ui.doubleSpinBoxPhase.value()
ret['norm_to_nrb'] = dialog.ui.checkBoxNormToNRB.isChecked()
ret['pad_factor'] = dialog.ui.spinBoxPadFactor.value()
return ret
else:
return None