Example #1
0
def test_3d_energy_decrease():

    a_black = cp.zeros((5, 5, 5)).astype(np.uint8)
    a_black[2, 2, 2] = 255
    a_white = invert(a_black)

    assert_array_less(meijering(a_black, black_ridges=True).std(),
                      a_black.std())
    assert_array_less(meijering(a_white, black_ridges=False).std(),
                      a_white.std())

    assert_array_less(sato(a_black, black_ridges=True, mode='reflect').std(),
                      a_black.std())
    assert_array_less(sato(a_white, black_ridges=False, mode='reflect').std(),
                      a_white.std())

    assert_array_less(frangi(a_black, black_ridges=True).std(),
                      a_black.std())
    assert_array_less(frangi(a_white, black_ridges=False).std(),
                      a_white.std())

    assert_array_less(hessian(a_black, black_ridges=True,
                              mode='reflect').std(), a_black.std())
    assert_array_less(hessian(a_white, black_ridges=False,
                              mode='reflect').std(), a_white.std())
Example #2
0
def test_3d_linearity():

    a_black = cp.ones((3, 3, 3)).astype(np.uint8)
    a_white = invert(a_black)

    assert_allclose(meijering(1 * a_black, black_ridges=True),
                    meijering(10 * a_black, black_ridges=True), atol=1e-3)
    assert_allclose(meijering(1 * a_white, black_ridges=False),
                    meijering(10 * a_white, black_ridges=False), atol=1e-3)

    assert_allclose(sato(1 * a_black, black_ridges=True, mode='reflect'),
                    sato(10 * a_black, black_ridges=True, mode='reflect'),
                    atol=1e-3)
    assert_allclose(sato(1 * a_white, black_ridges=False, mode='reflect'),
                    sato(10 * a_white, black_ridges=False, mode='reflect'),
                    atol=1e-3)

    assert_allclose(frangi(1 * a_black, black_ridges=True),
                    frangi(10 * a_black, black_ridges=True), atol=1e-3)
    assert_allclose(frangi(1 * a_white, black_ridges=False),
                    frangi(10 * a_white, black_ridges=False), atol=1e-3)

    assert_allclose(hessian(1 * a_black, black_ridges=True, mode='reflect'),
                    hessian(10 * a_black, black_ridges=True, mode='reflect'),
                    atol=1e-3)
    assert_allclose(hessian(1 * a_white, black_ridges=False, mode='reflect'),
                    hessian(10 * a_white, black_ridges=False, mode='reflect'),
                    atol=1e-3)
Example #3
0
def test_2d_cropped_camera_image():

    a_black = crop(cp.array(camera()), ((200, 212), (100, 312)))
    a_white = invert(a_black)

    zeros = cp.zeros((100, 100))
    ones = cp.ones((100, 100))

    assert_allclose(meijering(a_black, black_ridges=True),
                    meijering(a_white, black_ridges=False))

    assert_allclose(sato(a_black, black_ridges=True, mode='mirror'),
                    sato(a_white, black_ridges=False, mode='mirror'))

    assert_allclose(frangi(a_black, black_ridges=True), zeros, atol=1e-3)
    assert_allclose(frangi(a_white, black_ridges=False), zeros, atol=1e-3)

    assert_allclose(hessian(a_black, black_ridges=True, mode='mirror'),
                    ones, atol=1 - 1e-7)
    assert_allclose(hessian(a_white, black_ridges=False, mode='mirror'),
                    ones, atol=1 - 1e-7)
Example #4
0
def test_2d_null_matrix():

    a_black = cp.zeros((3, 3)).astype(cp.uint8)
    a_white = invert(a_black)

    zeros = cp.zeros((3, 3))
    ones = cp.ones((3, 3))

    assert_array_equal(meijering(a_black, black_ridges=True), zeros)
    assert_array_equal(meijering(a_white, black_ridges=False), zeros)

    assert_array_equal(sato(a_black, black_ridges=True, mode='reflect'),
                       zeros)
    assert_array_equal(sato(a_white, black_ridges=False, mode='reflect'),
                       zeros)
    assert_allclose(frangi(a_black, black_ridges=True), zeros, atol=1e-3)
    assert_allclose(frangi(a_white, black_ridges=False), zeros, atol=1e-3)

    assert_array_equal(hessian(a_black, black_ridges=False, mode='reflect'),
                       ones)
    assert_array_equal(hessian(a_white, black_ridges=True, mode='reflect'),
                       ones)
Example #5
0
def test_3d_cropped_camera_image():

    a_black = crop(cp.asarray(camera()), ((200, 212), (100, 312)))
    a_black = cp.dstack([a_black, a_black, a_black])
    a_white = invert(a_black)

    zeros = cp.zeros((100, 100, 3))
    ones = cp.ones((100, 100, 3))

    # TODO: determine why the following allclose checks occassionally fail
    assert_allclose(meijering(a_black, black_ridges=True),
                    meijering(a_white, black_ridges=False))

    assert_allclose(sato(a_black, black_ridges=True, mode='mirror'),
                    sato(a_white, black_ridges=False, mode='mirror'))

    assert_allclose(frangi(a_black, black_ridges=True), zeros, atol=1e-3)
    assert_allclose(frangi(a_white, black_ridges=False), zeros, atol=1e-3)

    assert_allclose(hessian(a_black, black_ridges=True, mode='mirror'),
                    ones, atol=1 - 1e-7)
    assert_allclose(hessian(a_white, black_ridges=False, mode='mirror'),
                    ones, atol=1 - 1e-7)