Python exon_finding Examples

Example #1

 def exon_finding(self):
     """
     Go through contiVec to idfentify the exons using base coverage (.baseC) and alt junction evidence (.altC)
     """
     v = self.contiVec
     self.exons = c_branch.exon_finding(v.baseC, v.altC_neg, v.altC_pos, v.transC, \
                         len(v.baseC), 2, 0, offset=self.offset)

Example #2

File: branch_simple2.py Project: Magdoll/cDNA_Cupcake

 def exon_finding(self):
     """
     Go through contiVec to idfentify the exons using base coverage (.baseC) and alt junction evidence (.altC)
     """
     v = self.contiVec
     self.exons = c_branch.exon_finding(v.baseC, v.altC_neg, v.altC_pos, v.transC, \
                         len(v.baseC), 2, 0, offset=self.offset)