def publish_version(dandiset_id: int) -> None:
with GirderClient(authenticate=True) as client:
dandiset = Dandiset.objects.get(pk=dandiset_id)
with client.dandiset_lock(dandiset.identifier):
version = Version.from_girder(dandiset, client)
for girder_file in client.files_in_folder(
dandiset.draft_folder_id):
Asset.from_girder(version, girder_file, client)
def publish_version(dandiset_id: int, user_id) -> None:
dandiset = Dandiset.objects.get(pk=dandiset_id)
try:
with GirderClient(authenticate=True) as client:
with client.dandiset_lock(dandiset.identifier):
version = Version.from_girder(dandiset, client)
for girder_file in client.files_in_folder(dandiset.draft_folder_id):
Asset.from_girder(version, girder_file, client)
finally:
# The draft was locked in django by the publish action
# We need to unlock it now
dandiset.draft_version.unlock(User.objects.get(id=user_id))
def paths(self, request, **kwargs):
"""
Return the unique files/directories that directly reside under the specified path.
The specified path must be a folder (must end with a slash).
"""
path_prefix: str = self.request.query_params.get('path_prefix') or '/'
# Enforce trailing slash
path_prefix = f'{path_prefix}/' if path_prefix[-1] != '/' else path_prefix
qs = self.get_queryset().filter(path__startswith=path_prefix).values()
return Response(Asset.get_path(path_prefix, qs))
def stats_view(self):
dandiset_count = Dandiset.objects.count()
published_dandiset_count = Dandiset.published_count()
user_count = User.objects.count()
size = Asset.total_size()
return Response(
{
'dandiset_count': dandiset_count,
'published_dandiset_count': published_dandiset_count,
'user_count': user_count,
'size': size,
}
)
def test_asset_get_path(path, qs, expected):
assert expected == Asset.get_path(path, qs)
def test_asset_from_girder(version, girder_file, mock_girder_client):
asset = Asset.from_girder(version, girder_file, mock_girder_client)
assert asset