Example #1
0
class PythonPredictor(BaseLanguagePredictor):
    def __init__(self):
        super(PythonPredictor, self).__init__()
        self._model_adapter = None
        self._mlops = None

    def configure(self, params):
        super(PythonPredictor, self).configure(params)

        self._model_adapter = PythonModelAdapter(model_dir=self._custom_model_path)

        sys.path.append(self._custom_model_path)
        self._model_adapter.load_custom_hooks()
        self._model = self._model_adapter.load_model_from_artifact()
        if self._model is None:
            raise Exception("Failed to load model")

    def predict(self, input_filename):

        kwargs = {}
        if self._positive_class_label and self._negative_class_label:
            kwargs[POSITIVE_CLASS_LABEL_ARG_KEYWORD] = self._positive_class_label
            kwargs[NEGATIVE_CLASS_LABEL_ARG_KEYWORD] = self._negative_class_label

        start_predict = time.time()
        predictions = self._model_adapter.predict(
            input_filename, model=self._model, unstructured_mode=self._unstructured_mode, **kwargs
        )
        end_predict = time.time()
        execution_time_ms = (end_predict - start_predict) * 1000

        # TODO: call monitor only if we are in structured mode
        self.monitor(input_filename, predictions, execution_time_ms)

        return predictions
class PythonPredictor(BaseLanguagePredictor):
    def __init__(self):
        super(PythonPredictor, self).__init__()
        self._model_adapter = None

    def configure(self, params):
        super(PythonPredictor, self).configure(params)

        self._model_adapter = PythonModelAdapter(
            model_dir=self._custom_model_path)

        sys.path.append(self._custom_model_path)
        self._model_adapter.load_custom_hooks()
        self._model = self._model_adapter.load_model_from_artifact()
        if self._model is None:
            raise Exception("Failed to load model")

    def predict(self, df):
        kwargs = {}
        if self._positive_class_label and self._negative_class_label:
            kwargs[
                POSITIVE_CLASS_LABEL_ARG_KEYWORD] = self._positive_class_label
            kwargs[
                NEGATIVE_CLASS_LABEL_ARG_KEYWORD] = self._negative_class_label

        predictions = self._model_adapter.predict(data=df,
                                                  model=self._model,
                                                  **kwargs)
        return predictions
Example #3
0
 def test_add_to_one_happy(self):
     positive_label = "poslabel"
     negative_label = "neglabel"
     adapter = PythonModelAdapter(model_dir=None, target_type=TargetType.BINARY)
     df = pd.DataFrame({positive_label: [0.1, 0.2, 0.3], negative_label: [0.9, 0.8, 0.7]})
     adapter._validate_predictions(
         to_validate=df, class_labels=[positive_label, negative_label],
     )
Example #4
0
 def test_add_to_one_sad(self):
     positive_label = "poslabel"
     negative_label = "neglabel"
     adapter = PythonModelAdapter(model_dir=None, target_type=TargetType.BINARY)
     df = pd.DataFrame({positive_label: [1, 1, 1], negative_label: [-1, 0, 0]})
     with pytest.raises(ValueError):
         adapter._validate_predictions(
             to_validate=df, class_labels=[positive_label, negative_label],
         )
Example #5
0
    def configure(self, params):
        super(PythonPredictor, self).configure(params)

        self._model_adapter = PythonModelAdapter(model_dir=self._custom_model_path)

        sys.path.append(self._custom_model_path)
        self._model_adapter.load_custom_hooks()
        self._model = self._model_adapter.load_model_from_artifact()
        if self._model is None:
            raise Exception("Failed to load model")
class PythonFit(ConnectableComponent):
    def __init__(self, engine):
        super(PythonFit, self).__init__(engine)
        self.target_name = None
        self.output_dir = None
        self.estimator = None
        self.positive_class_label = None
        self.negative_class_label = None
        self.class_labels = None
        self.custom_model_path = None
        self.input_filename = None
        self.weights = None
        self.sparse_column_file = None
        self.weights_filename = None
        self.target_filename = None
        self._model_adapter = None
        self.num_rows = None
        self.parameter_file = None

    def configure(self, params):
        super(PythonFit, self).configure(params)
        self.custom_model_path = self._params["__custom_model_path__"]
        self.input_filename = self._params["inputFilename"]
        self.sparse_column_file = self._params["sparse_column_file"]
        self.target_name = self._params.get("targetColumn")
        self.output_dir = self._params["outputDir"]
        self.positive_class_label = self._params.get("positiveClassLabel")
        self.negative_class_label = self._params.get("negativeClassLabel")
        self.class_labels = self._params.get("classLabels")
        self.weights = self._params["weights"]
        self.weights_filename = self._params["weightsFilename"]
        self.target_filename = self._params.get("targetFilename")
        self.num_rows = self._params["numRows"]
        self.parameter_file = self._params.get("parameterFile")

        self._model_adapter = PythonModelAdapter(self.custom_model_path)
        sys.path.append(self.custom_model_path)
        self._model_adapter.load_custom_hooks()

    def _materialize(self, parent_data_objs, user_data):

        X, y, class_order, row_weights, parameters = shared_fit_preprocessing(
            self)

        self._model_adapter.fit(
            X,
            y,
            output_dir=self.output_dir,
            class_order=class_order,
            row_weights=row_weights,
            parameters=parameters,
        )

        make_sure_artifact_is_small(self.output_dir)
        return []
Example #7
0
    def configure(self, params):
        super(PythonPredictor, self).configure(params)
        self.custom_model_path = self._params["__custom_model_path__"]
        self.positive_class_label = self._params.get("positiveClassLabel")
        self.negative_class_label = self._params.get("negativeClassLabel")
        self._model_adapter = PythonModelAdapter(
            model_dir=self.custom_model_path)

        sys.path.append(self.custom_model_path)
        self._model_adapter.load_custom_hooks()
        self.model = self._model_adapter.load_model_from_artifact()
        if self.model is None:
            raise Exception("Failed to load model")
Example #8
0
 def test_add_to_one_happy(self):
     positive_label = "poslabel"
     negative_label = "neglabel"
     adapter = PythonModelAdapter(model_dir=None)
     df = pd.DataFrame({
         positive_label: [0.1, 0.2, 0.3],
         negative_label: [0.9, 0.8, 0.7]
     })
     adapter._validate_predictions(
         to_validate=df,
         positive_class_label=positive_label,
         negative_class_label=negative_label,
     )
class PythonPredictor(BaseLanguagePredictor):
    def __init__(self):
        super(PythonPredictor, self).__init__()
        self._model_adapter = None
        self._mlops = None

    def configure(self, params):
        super(PythonPredictor, self).configure(params)

        self._model_adapter = PythonModelAdapter(
            model_dir=self._custom_model_path, target_type=self._target_type)

        sys.path.append(self._custom_model_path)
        self._model_adapter.load_custom_hooks()
        self._model = self._model_adapter.load_model_from_artifact()
        if self._model is None:
            raise Exception("Failed to load model")

    def predict(self, input_filename):
        kwargs = {}
        kwargs[TARGET_TYPE_ARG_KEYWORD] = self._target_type
        if self._positive_class_label and self._negative_class_label:
            kwargs[
                POSITIVE_CLASS_LABEL_ARG_KEYWORD] = self._positive_class_label
            kwargs[
                NEGATIVE_CLASS_LABEL_ARG_KEYWORD] = self._negative_class_label

        start_predict = time.time()
        predictions = self._model_adapter.predict(input_filename,
                                                  model=self._model,
                                                  **kwargs)
        end_predict = time.time()
        execution_time_ms = (end_predict - start_predict) * 1000

        # TODO: call monitor only if we are in structured mode
        self.monitor(input_filename, predictions, execution_time_ms)

        return predictions

    def predict_unstructured(self, data, **kwargs):
        str_or_tuple = self._model_adapter.predict_unstructured(
            model=self._model, data=data, **kwargs)
        if isinstance(str_or_tuple, (str, bytes, type(None))):
            ret = str_or_tuple, None
        elif isinstance(str_or_tuple, tuple):
            ret = str_or_tuple
        else:
            raise DrumCommonException(
                "Wrong type returned in unstructured mode: {}".format(
                    type(str_or_tuple)))
        return ret
Example #10
0
 def test_add_to_one_sad(self):
     positive_label = "poslabel"
     negative_label = "neglabel"
     adapter = PythonModelAdapter(model_dir=None)
     df = pd.DataFrame({
         positive_label: [1, 1, 1],
         negative_label: [-1, 0, 0]
     })
     with pytest.raises(ValueError):
         adapter._validate_predictions(
             to_validate=df,
             positive_class_label=positive_label,
             negative_class_label=negative_label,
         )
class PythonPredictor(BaseLanguagePredictor):
    def __init__(self):
        super(PythonPredictor, self).__init__()
        self._model_adapter = None
        self._mlops = None

    def configure(self, params):
        super(PythonPredictor, self).configure(params)

        self._model_adapter = PythonModelAdapter(model_dir=self._code_dir,
                                                 target_type=self._target_type)

        sys.path.append(self._code_dir)
        self._model_adapter.load_custom_hooks()
        self._model = self._model_adapter.load_model_from_artifact()
        if self._model is None:
            raise Exception("Failed to load model")

    @property
    def supported_payload_formats(self):
        return self._model_adapter.supported_payload_formats

    def model_info(self):
        model_info = super(PythonPredictor, self).model_info()
        model_info.update(self._model_adapter.model_info())
        return model_info

    def has_read_input_data_hook(self):
        return self._model_adapter.has_read_input_data_hook()

    def _predict(self, **kwargs):
        kwargs[TARGET_TYPE_ARG_KEYWORD] = self._target_type
        if self._positive_class_label is not None and self._negative_class_label is not None:
            kwargs[
                POSITIVE_CLASS_LABEL_ARG_KEYWORD] = self._positive_class_label
            kwargs[
                NEGATIVE_CLASS_LABEL_ARG_KEYWORD] = self._negative_class_label
        if self._class_labels:
            kwargs[CLASS_LABELS_ARG_KEYWORD] = self._class_labels

        predictions = self._model_adapter.predict(model=self._model, **kwargs)
        return predictions

    def transform(self, **kwargs):
        return self._model_adapter.transform(model=self._model, **kwargs)

    def predict_unstructured(self, data, **kwargs):
        str_or_tuple = self._model_adapter.predict_unstructured(
            model=self._model, data=data, **kwargs)
        if isinstance(str_or_tuple, (str, bytes, type(None))):
            ret = str_or_tuple, None
        elif isinstance(str_or_tuple, tuple):
            ret = str_or_tuple
        else:
            raise DrumCommonException(
                "Wrong type returned in unstructured mode: {}".format(
                    type(str_or_tuple)))
        return ret
    def configure(self, params):
        super(PythonFit, self).configure(params)
        self.custom_model_path = self._params["__custom_model_path__"]
        self.input_filename = self._params["inputFilename"]
        self.target_name = self._params.get("targetColumn")
        self.output_dir = self._params["outputDir"]
        self.positive_class_label = self._params.get("positiveClassLabel")
        self.negative_class_label = self._params.get("negativeClassLabel")
        self.weights = self._params["weights"]
        self.weights_filename = self._params["weightsFilename"]
        self.target_filename = self._params.get("targetFilename")
        self.num_rows = self._params["numRows"]

        self._model_adapter = PythonModelAdapter(self.custom_model_path)
        sys.path.append(self.custom_model_path)
        self._model_adapter.load_custom_hooks()
Example #13
0
class PythonPredictor(ConnectableComponent):
    def __init__(self, engine):
        super(PythonPredictor, self).__init__(engine)
        self.model = None
        self.positive_class_label = None
        self.negative_class_label = None
        self.custom_model_path = None
        self._model_adapter = None

    def configure(self, params):
        super(PythonPredictor, self).configure(params)
        self.custom_model_path = self._params["__custom_model_path__"]
        self.positive_class_label = self._params.get("positiveClassLabel")
        self.negative_class_label = self._params.get("negativeClassLabel")
        self._model_adapter = PythonModelAdapter(
            model_dir=self.custom_model_path)

        sys.path.append(self.custom_model_path)
        self._model_adapter.load_custom_hooks()
        self.model = self._model_adapter.load_model_from_artifact()
        if self.model is None:
            raise Exception("Failed to load model")

    def _materialize(self, parent_data_objs, user_data):
        df = parent_data_objs[0]

        kwargs = {}
        if self.positive_class_label and self.negative_class_label:
            kwargs[
                POSITIVE_CLASS_LABEL_ARG_KEYWORD] = self.positive_class_label
            kwargs[
                NEGATIVE_CLASS_LABEL_ARG_KEYWORD] = self.negative_class_label

        predictions = self._model_adapter.predict(data=df,
                                                  model=self.model,
                                                  **kwargs)
        return [predictions]
 def test_regression_predictions_header(self):
     adapter = PythonModelAdapter(model_dir=None, target_type=TargetType.REGRESSION)
     df = pd.DataFrame({"Predictions": [0.1, 0.2, 0.3]})
     adapter._validate_predictions(
         to_validate=df, class_labels=None,
     )
     with pytest.raises(ValueError):
         df = pd.DataFrame({"other_name": [0.1, 0.2, 0.3]})
         adapter._validate_predictions(
             to_validate=df, class_labels=None,
         )
 def test_class_labels(self):
     positive_label = "poslabel"
     negative_label = "neglabel"
     adapter = PythonModelAdapter(model_dir=None, target_type=TargetType.BINARY)
     df = pd.DataFrame({positive_label: [0.1, 0.2, 0.3], negative_label: [0.9, 0.8, 0.7]})
     adapter._validate_predictions(
         to_validate=df, class_labels=[positive_label, negative_label],
     )
     with pytest.raises(ValueError):
         df = pd.DataFrame({positive_label: [0.1, 0.2, 0.3], negative_label: [0.9, 0.8, 0.7]})
         adapter._validate_predictions(
             to_validate=df, class_labels=["yes", "no"],
         )
class PythonFit(ConnectableComponent):
    def __init__(self, engine):
        super(PythonFit, self).__init__(engine)
        self.target_name = None
        self.output_dir = None
        self.estimator = None
        self.positive_class_label = None
        self.negative_class_label = None
        self.custom_model_path = None
        self.input_filename = None
        self.weights = None
        self.weights_filename = None
        self.target_filename = None
        self._model_adapter = None
        self.num_rows = None

    def configure(self, params):
        super(PythonFit, self).configure(params)
        self.custom_model_path = self._params["__custom_model_path__"]
        self.input_filename = self._params["inputFilename"]
        self.target_name = self._params.get("targetColumn")
        self.output_dir = self._params["outputDir"]
        self.positive_class_label = self._params.get("positiveClassLabel")
        self.negative_class_label = self._params.get("negativeClassLabel")
        self.weights = self._params["weights"]
        self.weights_filename = self._params["weightsFilename"]
        self.target_filename = self._params.get("targetFilename")
        self.num_rows = self._params["numRows"]

        self._model_adapter = PythonModelAdapter(self.custom_model_path)
        sys.path.append(self.custom_model_path)
        self._model_adapter.load_custom_hooks()

    def _materialize(self, parent_data_objs, user_data):
        df = pd.read_csv(self.input_filename)
        if self.num_rows == "ALL":
            self.num_rows = len(df)
        else:
            self.num_rows = int(self.num_rows)
        if self.target_filename:
            X = df.sample(self.num_rows, random_state=1)
            y = pd.read_csv(self.target_filename,
                            index_col=False).sample(self.num_rows,
                                                    random_state=1)
            assert len(y.columns) == 1
            assert len(X) == len(y)
            y = y.iloc[:, 0]
        else:
            X = df.drop(self.target_name, axis=1).sample(self.num_rows,
                                                         random_state=1,
                                                         replace=True)
            y = df[self.target_name].sample(self.num_rows,
                                            random_state=1,
                                            replace=True)

        if self.weights_filename:
            row_weights = pd.read_csv(self.weights_filename).sample(
                self.num_rows, random_state=1, replace=True)
        elif self.weights:
            if self.weights not in X.columns:
                raise ValueError(
                    "The column name {} is not one of the columns in "
                    "your training data".format(self.weights))
            row_weights = X[self.weights]
        else:
            row_weights = None

        class_order = ([self.negative_class_label, self.positive_class_label]
                       if self.negative_class_label else None)
        self._model_adapter.fit(X,
                                y,
                                output_dir=self.output_dir,
                                class_order=class_order,
                                row_weights=row_weights)

        make_sure_artifact_is_small(self.output_dir)
        return []