Example #1
0
    def __init__(self, x, y, z, tx, ty, w=None, bbox=[None]*4, kx=3, ky=3,
                 eps=None):
        nx = 2*kx+2+len(tx)
        ny = 2*ky+2+len(ty)
        tx1 = zeros((nx,),float)
        ty1 = zeros((ny,),float)
        tx1[kx+1:nx-kx-1] = tx
        ty1[ky+1:ny-ky-1] = ty

        xb,xe,yb,ye = bbox
        tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                               xb,xe,yb,ye,\
                                               kx,ky,eps,lwrk2=1)
        if ier>10:
            tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                                   xb,xe,yb,ye,\
                                                   kx,ky,eps,lwrk2=ier)
        if ier in [0,-1,-2]: # normal return
            pass
        else:
            if ier<-2:
                deficiency = (nx-kx-1)*(ny-ky-1)+ier
                message = _surfit_messages.get(-3) % (deficiency)
            else:
                message = _surfit_messages.get(ier,'ier=%s' % (ier))
            warnings.warn(message)
        self.fp = fp
        self.tck = tx1,ty1,c
        self.degrees = kx,ky
Example #2
0
    def __init__(self, x, y, z, tx, ty, w=None, bbox=[None]*4, kx=3, ky=3,
                 eps=None):
        nx = 2*kx+2+len(tx)
        ny = 2*ky+2+len(ty)
        tx1 = zeros((nx,),float)
        ty1 = zeros((ny,),float)
        tx1[kx+1:nx-kx-1] = tx
        ty1[ky+1:ny-ky-1] = ty

        xb,xe,yb,ye = bbox
        tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                               xb,xe,yb,ye,\
                                               kx,ky,eps,lwrk2=1)
        if ier>10:
            tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                                   xb,xe,yb,ye,\
                                                   kx,ky,eps,lwrk2=ier)
        if ier in [0,-1,-2]: # normal return
            pass
        else:
            if ier<-2:
                deficiency = (nx-kx-1)*(ny-ky-1)+ier
                message = _surfit_messages.get(-3) % (deficiency)
            else:
                message = _surfit_messages.get(ier,'ier=%s' % (ier))
            warnings.warn(message)
        self.fp = fp
        self.tck = tx1,ty1,c
        self.degrees = kx,ky
Example #3
0
    def __init__(self,
                 x,
                 y,
                 z,
                 tx,
                 ty,
                 w=None,
                 bbox=[None] * 4,
                 kx=3,
                 ky=3,
                 eps=None):
        """
        Input:
          x,y,z  - 1-d sequences of data points (order is not
                   important)
          tx,ty  - strictly ordered 1-d sequences of knots
                   coordinates.
        Optional input:
          w          - positive 1-d sequence of weights
          bbox       - 4-sequence specifying the boundary of
                       the rectangular approximation domain.
                       By default, bbox=[min(x,tx),max(x,tx),
                                         min(y,ty),max(y,ty)]
          kx,ky=3,3  - degrees of the bivariate spline.
          eps        - a threshold for determining the effective rank
                       of an over-determined linear system of
                       equations. 0 < eps < 1, default is 1e-16.
        """
        nx = 2 * kx + 2 + len(tx)
        ny = 2 * ky + 2 + len(ty)
        tx1 = zeros((nx, ), float)
        ty1 = zeros((ny, ), float)
        tx1[kx + 1:nx - kx - 1] = tx
        ty1[ky + 1:ny - ky - 1] = ty

        xb, xe, yb, ye = bbox
        tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                               xb,xe,yb,ye,\
                                               kx,ky,eps,lwrk2=1)
        if ier > 10:
            tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                                   xb,xe,yb,ye,\
                                                   kx,ky,eps,lwrk2=ier)
        if ier in [0, -1, -2]:  # normal return
            pass
        else:
            if ier < -2:
                deficiency = (nx - kx - 1) * (ny - ky - 1) + ier
                message = _surfit_messages.get(-3) % (deficiency)
            else:
                message = _surfit_messages.get(ier, 'ier=%s' % (ier))
            warnings.warn(message)
        self.fp = fp
        self.tck = tx1, ty1, c
        self.degrees = kx, ky
Example #4
0
    def __init__(self, x, y, z, tx, ty, w=None,
                 bbox = [None]*4,
                 kx=3, ky=3, eps=None):
        """
        Input:
          x,y,z  - 1-d sequences of data points (order is not
                   important)
          tx,ty  - strictly ordered 1-d sequences of knots
                   coordinates.
        Optional input:
          w          - positive 1-d sequence of weights
          bbox       - 4-sequence specifying the boundary of
                       the rectangular approximation domain.
                       By default, bbox=[min(x,tx),max(x,tx),
                                         min(y,ty),max(y,ty)]
          kx,ky=3,3  - degrees of the bivariate spline.
          eps        - a threshold for determining the effective rank
                       of an over-determined linear system of
                       equations. 0 < eps < 1, default is 1e-16.
        """
        nx = 2*kx+2+len(tx)
        ny = 2*ky+2+len(ty)
        tx1 = zeros((nx,),float)
        ty1 = zeros((ny,),float)
        tx1[kx+1:nx-kx-1] = tx
        ty1[ky+1:ny-ky-1] = ty

        xb,xe,yb,ye = bbox
        tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                               xb,xe,yb,ye,\
                                               kx,ky,eps,lwrk2=1)
        if ier>10:
            tx1,ty1,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx1,ty1,w,\
                                                   xb,xe,yb,ye,\
                                                   kx,ky,eps,lwrk2=ier)
        if ier in [0,-1,-2]: # normal return
            pass
        else:
            if ier<-2:
                deficiency = (nx-kx-1)*(ny-ky-1)+ier
                message = _surfit_messages.get(-3) % (deficiency)
            else:
                message = _surfit_messages.get(ier,'ier=%s' % (ier))
            warnings.warn(message)
        self.fp = fp
        self.tck = tx1,ty1,c
        self.degrees = kx,ky
Example #5
0
def bisplrep(x,y,z,w=None,xb=None,xe=None,yb=None,ye=None,kx=3,ky=3,task=0,
             s=None,eps=1e-16,tx=None,ty=None,full_output=0,
             nxest=None,nyest=None,quiet=1):
    """Find a bivariate B-spline representation of a surface.

    Description:
      Given a set of data points (x[i], y[i], z[i]) representing a surface
      z=f(x,y), compute a B-spline representation of the surface.

    Inputs:
      x, y, z -- Rank-1 arrays of data points.
      w -- Rank-1 array of weights. By default w=ones(len(x)).
      xb, xe -- End points of approximation interval in x.
      yb, ye -- End points of approximation interval in y.
                By default xb, xe, yb, ye = x.min(), x.max(), y.min(), y.max()
      kx, ky -- The degrees of the spline (1 <= kx, ky <= 5).  Third order
                (kx=ky=3) is recommended.
      task -- If task=0, find knots in x and y and coefficients for a given
                smoothing factor, s.
              If task=1, find knots and coefficients for another value of the
                smoothing factor, s.  bisplrep must have been previously called
                with task=0 or task=1.
              If task=-1, find coefficients for a given set of knots tx, ty.
      s -- A non-negative smoothing factor.  If weights correspond
           to the inverse of the standard-deviation of the errors in z,
           then a good s-value should be found in the range
           (m-sqrt(2*m),m+sqrt(2*m)) where m=len(x)
      eps -- A threshold for determining the effective rank of an
             over-determined linear system of equations (0 < eps < 1)
             --- not likely to need changing.
      tx, ty -- Rank-1 arrays of the knots of the spline for task=-1
      full_output -- Non-zero to return optional outputs.
      nxest, nyest -- Over-estimates of the total number of knots.
                      If None then nxest = max(kx+sqrt(m/2),2*kx+3),
                                   nyest = max(ky+sqrt(m/2),2*ky+3)
      quiet -- Non-zero to suppress printing of messages.

    Outputs: (tck, {fp, ier, msg})
      tck -- A list [tx, ty, c, kx, ky] containing the knots (tx, ty) and
             coefficients (c) of the bivariate B-spline representation of the
             surface along with the degree of the spline.

      fp -- The weighted sum of squared residuals of the spline approximation.
      ier -- An integer flag about splrep success.  Success is indicated if
             ier<=0. If ier in [1,2,3] an error occurred but was not raised.
             Otherwise an error is raised.
      msg -- A message corresponding to the integer flag, ier.

    Remarks:
      SEE bisplev to evaluate the value of the B-spline given its tck
      representation.

    See also:
      splprep, splrep, splint, sproot, splev - evaluation, roots, integral
      UnivariateSpline, BivariateSpline - an alternative wrapping
              of the FITPACK functions
    """
    x,y,z=map(myasarray,[x,y,z])
    x,y,z=map(ravel,[x,y,z])  # ensure 1-d arrays.
    m=len(x)
    if not (m==len(y)==len(z)):
        raise TypeError, 'len(x)==len(y)==len(z) must hold.'
    if w is None: w=ones(m,float)
    else: w=myasarray(w)
    if not len(w) == m:
        raise TypeError,' len(w)=%d is not equal to m=%d'%(len(w),m)
    if xb is None: xb=x.min()
    if xe is None: xe=x.max()
    if yb is None: yb=y.min()
    if ye is None: ye=y.max()
    if not (-1<=task<=1): raise TypeError, 'task must be either -1,0, or 1'
    if s is None: s=m-sqrt(2*m)
    if task==-1:
        if tx is None: raise TypeError, 'Knots_x must be given for task=-1'
        _surfit_cache['tx']=myasarray(tx)
        if ty is None: raise TypeError, 'Knots_y must be given for task=-1'
        _surfit_cache['ty']=myasarray(ty)
        if nx<2*kx+2:
            raise TypeError,'There must be at least 2*kx+2 knots_x for task=-1'
        if ny<2*ky+2:
            raise TypeError,'There must be at least 2*ky+2 knots_y for task=-1'
    if not ((1<=kx<=5) and (1<=ky<=5)):
        raise TypeError, 'Given degree of the spline (kx,ky=%d,%d) is not \
                          supported. (1<=k<=5)'%(kx,ky)
    if m<(kx+1)*(ky+1): raise TypeError, 'm>=(kx+1)(ky+1) must hold'
    if nxest is None: nxest=kx+sqrt(m/2)
    if nyest is None: nyest=ky+sqrt(m/2)
    nxest,nyest=max(nxest,2*kx+3),max(nyest,2*ky+3)
    if task>=0 and s==0:
        nxest=int(kx+sqrt(3*m))
        nyest=int(ky+sqrt(3*m))
    if task == 0:
        nx,tx,ny,ty,c,fp,wrk1,ier = dfitpack.surfit_smth0(x,y,z,w,xb,xe,yb,ye,
                                                         kx,ky,s=s,eps=eps,
                                                       nxest=nxest,nyest=nyest)
    elif task==1:
        try:
            tx,ty=_surfit_cache['tx'],_surfit_cache['ty']
            nx,ny= _surfit_cache['nx'],_surfit_cache['ny']
            wrk1 = _surfit_cache['wrk1']
        except KeyError:
            raise ValueError, 'task=1 can only be called after task=0'
        nx,tx,ny,ty,c,fp,wrk1,ier=dfitpack.surfit_smth1(x,y,z,nx,tx,ny,ty,wrk1,
                                             w,xb,xe,yb,ye,kx,ky,s=s,eps=eps,
                                             nxest=nxest,nyest=nyest)
    elif task==-1:
        tx = myasarray(tx)
        ty = myasarray(ty)
        tx,ty,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx,ty,w,
                                               xb,xe,yb,ye,
                                               kx,ky,eps,
                                               nxest=nxest,nyest=nyest)
        if ier>10:
            tx,ty,c,fp,ier = dfitpack.surfit_lsq(x,y,z,tx,ty,w,\
                                                   xb,xe,yb,ye,\
                                                   kx,ky,eps,\
                                                   nxest=nxest,nyest=nyest)
    if task>=0:
        _surfit_cache['tx']=tx
        _surfit_cache['ty']=ty
        _surfit_cache['nx']=nx
        _surfit_cache['ny']=ny
        _surfit_cache['wrk1']=wrk1
    tck=[tx[:nx],ty[:ny],c[:(nx-kx-1)*(ny-ky-1)],kx,ky]
    if ier<=0 and not quiet:
        print _iermess2[ier][0]
        print "\tkx,ky=%d,%d nx,ny=%d,%d m=%d fp=%f s=%f"%(kx,ky,len(tx),
                                                           len(ty),m,fp,s)
    ierm=min(11,max(-3,ier))
    if ierm>0 and not full_output:
        if ier in [1,2,3,4,5]:
            print "Warning: "+_iermess2[ierm][0]
            print "\tkx,ky=%d,%d nx,ny=%d,%d m=%d fp=%f s=%f"%(kx,ky,len(tx),
                                                           len(ty),m,fp,s)
        else:
            try:
                raise _iermess2[ierm][1],_iermess2[ierm][0]
            except KeyError:
                raise _iermess2['unknown'][1],_iermess2['unknown'][0]
    if full_output:
        try:
            return tck,fp,ier,_iermess2[ierm][0]
        except KeyError:
            return tck,fp,ier,_iermess2['unknown'][0]
    else:
        return tck