def to_dict(self):
obj = {}
obj['__id__'] = 'XSweep'
import inspect
attributes = inspect.getmembers(self, lambda m:not(inspect.isroutine(m)))
for a in attributes:
if a[0] in ('_indexer', '_refiner', '_integrater') and a[1] is not None:
obj[a[0]] = a[1].to_dict()
elif a[0] == '_imageset':
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = imageset_to_dict(a[1])
elif a[0] == '_input_imageset':
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = imageset_to_dict(a[1])
elif a[0] == '_wavelength':
# don't serialize this since the parent xwavelength *should* contain
# the reference to the child xsweep
continue
elif a[0] == '_sample':
# don't serialize this since the parent xsample *should* contain
# the reference to the child xsweep
continue
elif a[0].startswith('__'):
continue
else:
obj[a[0]] = a[1]
return obj
def to_dict(self):
obj = {}
obj["__id__"] = "XSweep"
attributes = inspect.getmembers(self,
lambda m: not (inspect.isroutine(m)))
for a in attributes:
if a[0] in ("_indexer", "_refiner",
"_integrater") and a[1] is not None:
obj[a[0]] = a[1].to_dict()
elif a[0] == "_imageset":
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = imageset_to_dict(a[1])
elif a[0] == "_input_imageset":
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = imageset_to_dict(a[1])
elif a[0] == "_wavelength":
# don't serialize this since the parent xwavelength *should* contain
# the reference to the child xsweep
continue
elif a[0] == "sample":
# don't serialize this since the parent xsample *should* contain
# the reference to the child xsweep
continue
elif a[0].startswith("__"):
continue
else:
obj[a[0]] = a[1]
return obj
def imageset_to_string(obj, compact=False):
''' Dump the given object to string.
Params:
obj The imageset
compact Write in compact representation
Returns:
The JSON string
'''
import json
import textwrap
from dxtbx.serialize.imageset import imageset_to_dict
# Return as a JSON string
if compact == False:
string = json.dumps(imageset_to_dict(obj),
indent=2, ensure_ascii=True)
# Hack to make more readable
#string = compact_simple_lists(string)
else:
string = json.dumps(imageset_to_dict(obj),
separators=(',',':'), ensure_ascii=True)
# Return the string
return string
def to_dict(self):
obj = {}
obj['__id__'] = 'Indexer'
obj['__module__'] = self.__class__.__module__
obj['__name__'] = self.__class__.__name__
import inspect
attributes = inspect.getmembers(self, lambda m:not(inspect.isroutine(m)))
for a in attributes:
if a[0] == '_indxr_helper' and a[1] is not None:
lattice_cell_dict = {}
lattice_list = a[1].get_all()
for l, c in lattice_list:
lattice_cell_dict[l] = c
obj[a[0]] = lattice_cell_dict
elif a[0] == '_indxr_experiment_list' and a[1] is not None:
obj[a[0]] = a[1].to_dict()
elif a[0] == '_indxr_imagesets':
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = [imageset_to_dict(imgset) for imgset in a[1]]
elif a[0] == '_indxr_sweeps':
# XXX I guess we probably want this?
continue
elif (a[0].startswith('_indxr_') or
a[0].startswith('_fp_')):
obj[a[0]] = a[1]
return obj
def to_dict(self):
obj = {}
obj["__id__"] = "Indexer"
obj["__module__"] = self.__class__.__module__
obj["__name__"] = self.__class__.__name__
attributes = inspect.getmembers(self, lambda m: not (inspect.isroutine(m)))
for a in attributes:
if a[0] == "_indxr_helper" and a[1] is not None:
lattice_cell_dict = {}
lattice_list = a[1].get_all()
for l, c in lattice_list:
lattice_cell_dict[l] = c
obj[a[0]] = lattice_cell_dict
elif a[0] == "_indxr_experiment_list" and a[1] is not None:
obj[a[0]] = a[1].to_dict()
elif a[0] == "_indxr_imagesets":
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = [imageset_to_dict(imgset) for imgset in a[1]]
elif a[0] == "_indxr_sweeps":
# XXX I guess we probably want this?
continue
elif a[0].startswith("_indxr_") or a[0].startswith("_fp_"):
obj[a[0]] = a[1]
return obj
def imageset_to_string(obj, compact=False):
"""Dump the given object to string.
Params:
obj The imageset
compact Write in compact representation
Returns:
The JSON string
"""
if compact:
return json.dumps(
imageset_to_dict(obj), separators=(",", ":"), ensure_ascii=True
)
else:
return json.dumps(imageset_to_dict(obj), indent=2, ensure_ascii=True)
def to_dict(self):
obj = {}
obj['__id__'] = 'Integrater'
obj['__module__'] = self.__class__.__module__
obj['__name__'] = self.__class__.__name__
import inspect
attributes = inspect.getmembers(self, lambda m:not(inspect.isroutine(m)))
for a in attributes:
if a[0] in ('_intgr_indexer', '_intgr_refiner') and a[1] is not None:
obj[a[0]] = a[1].to_dict()
elif a[0] == '_fp_imageset':
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = imageset_to_dict(a[1])
elif a[0] == '_intgr_sweep':
# XXX I guess we probably want this?
continue
elif (a[0].startswith('_intgr_') or
a[0].startswith('_fp_')):
obj[a[0]] = a[1]
return obj
def to_dict(self):
obj = {}
obj['__id__'] = 'Integrater'
obj['__module__'] = self.__class__.__module__
obj['__name__'] = self.__class__.__name__
import inspect
attributes = inspect.getmembers(self, lambda m:not(inspect.isroutine(m)))
for a in attributes:
if a[0] in ('_intgr_indexer', '_intgr_refiner') and a[1] is not None:
obj[a[0]] = a[1].to_dict()
elif a[0] == '_fp_imageset':
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = imageset_to_dict(a[1])
elif a[0] == '_intgr_sweep':
# XXX I guess we probably want this?
continue
elif (a[0].startswith('_intgr_') or
a[0].startswith('_fp_')):
obj[a[0]] = a[1]
return obj
def to_dict(self):
obj = {}
obj["__id__"] = "Integrater"
obj["__module__"] = self.__class__.__module__
obj["__name__"] = self.__class__.__name__
attributes = inspect.getmembers(self,
lambda m: not inspect.isroutine(m))
for a in attributes:
if a[0] in ("_intgr_indexer",
"_intgr_refiner") and a[1] is not None:
obj[a[0]] = a[1].to_dict()
elif a[0] == "_fp_imageset":
from dxtbx.serialize.imageset import imageset_to_dict
obj[a[0]] = imageset_to_dict(a[1])
elif a[0] == "_intgr_sweep":
# XXX I guess we probably want this?
continue
elif a[0].startswith("_intgr_") or a[0].startswith("_fp_"):
obj[a[0]] = a[1]
return obj
