def test_generaloption_overrides_legacy(self): """Test whether generaloption overrides legacy configuration.""" self.purge_environment() # if both legacy and generaloption style configuration is mixed, generaloption wins legacy_prefix = os.path.join(self.tmpdir, 'legacy') go_prefix = os.path.join(self.tmpdir, 'generaloption') # legacy env vars os.environ['EASYBUILDPREFIX'] = legacy_prefix os.environ['EASYBUILDBUILDPATH'] = os.path.join(legacy_prefix, 'build') # generaloption env vars os.environ['EASYBUILD_INSTALLPATH'] = go_prefix init_config() self.assertEqual(build_path(), os.path.join(legacy_prefix, 'build')) self.assertEqual(install_path(), os.path.join(go_prefix, 'software')) repo = init_repository(get_repository(), get_repositorypath()) self.assertEqual(repo.repo, os.path.join(legacy_prefix, 'ebfiles_repo')) del os.environ['EASYBUILDPREFIX'] # legacy env vars os.environ['EASYBUILDBUILDPATH'] = os.path.join(legacy_prefix, 'buildagain') # generaloption env vars os.environ['EASYBUILD_PREFIX'] = go_prefix init_config() self.assertEqual(build_path(), os.path.join(go_prefix, 'build')) self.assertEqual(install_path(), os.path.join(go_prefix, 'software')) repo = init_repository(get_repository(), get_repositorypath()) self.assertEqual(repo.repo, os.path.join(go_prefix, 'ebfiles_repo')) del os.environ['EASYBUILDBUILDPATH']
def test_generaloption_overrides_legacy(self): """Test whether generaloption overrides legacy configuration.""" self.purge_environment() # if both legacy and generaloption style configuration is mixed, generaloption wins legacy_prefix = os.path.join(self.tmpdir, 'legacy') go_prefix = os.path.join(self.tmpdir, 'generaloption') # legacy env vars os.environ['EASYBUILDPREFIX'] = legacy_prefix os.environ['EASYBUILDBUILDPATH'] = os.path.join(legacy_prefix, 'build') # generaloption env vars os.environ['EASYBUILD_INSTALLPATH'] = go_prefix init_config() self.assertEqual(build_path(), os.path.join(legacy_prefix, 'build')) self.assertEqual(install_path(), os.path.join(go_prefix, 'software')) repo = init_repository(get_repository(), get_repositorypath()) self.assertEqual(repo.repo, os.path.join(legacy_prefix, 'ebfiles_repo')) del os.environ['EASYBUILDPREFIX'] # legacy env vars os.environ['EASYBUILDBUILDPATH'] = os.path.join( legacy_prefix, 'buildagain') # generaloption env vars os.environ['EASYBUILD_PREFIX'] = go_prefix init_config() self.assertEqual(build_path(), os.path.join(go_prefix, 'build')) self.assertEqual(install_path(), os.path.join(go_prefix, 'software')) repo = init_repository(get_repository(), get_repositorypath()) self.assertEqual(repo.repo, os.path.join(go_prefix, 'ebfiles_repo')) del os.environ['EASYBUILDBUILDPATH']
def create_job(build_command, easyconfig, output_dir=None, conn=None, ppn=None): """ Creates a job, to build a *single* easyconfig @param build_command: format string for command, full path to an easyconfig file will be substituted in it @param easyconfig: easyconfig as processed by process_easyconfig @param output_dir: optional output path; --regtest-output-dir will be used inside the job with this variable @param conn: open connection to PBS server @param ppn: ppn setting to use (# 'processors' (cores) per node to use) returns the job """ if output_dir is None: output_dir = 'easybuild-build' # capture PYTHONPATH, MODULEPATH and all variables starting with EASYBUILD easybuild_vars = {} for name in os.environ: if name.startswith("EASYBUILD"): easybuild_vars[name] = os.environ[name] others = ["PYTHONPATH", "MODULEPATH"] for env_var in others: if env_var in os.environ: easybuild_vars[env_var] = os.environ[env_var] _log.info("Dictionary of environment variables passed to job: %s" % easybuild_vars) # obtain unique name based on name/easyconfig version tuple ec_tuple = (easyconfig['ec']['name'], det_full_ec_version(easyconfig['ec'])) name = '-'.join(ec_tuple) # create command based on build_command template command = build_command % { 'spec': easyconfig['spec'], 'output_dir': os.path.join(os.path.abspath(output_dir), name), } # just use latest build stats repo = init_repository(get_repository(), get_repositorypath()) buildstats = repo.get_buildstats(*ec_tuple) resources = {} if buildstats: previous_time = buildstats[-1]['build_time'] resources['hours'] = int(math.ceil(previous_time * 2 / 60)) job = PbsJob(command, name, easybuild_vars, resources=resources, conn=conn, ppn=ppn) job.module = easyconfig['ec'].full_mod_name return job
def create_job(job_backend, build_command, easyconfig, output_dir='easybuild-build'): """ Creates a job to build a *single* easyconfig. :param job_backend: A factory object for querying server parameters and creating actual job objects :param build_command: format string for command, full path to an easyconfig file will be substituted in it :param easyconfig: easyconfig as processed by process_easyconfig :param output_dir: optional output path; --regtest-output-dir will be used inside the job with this variable returns the job """ # capture PYTHONPATH, MODULEPATH and all variables starting with EASYBUILD easybuild_vars = {} for name in os.environ: if name.startswith("EASYBUILD"): easybuild_vars[name] = os.environ[name] for env_var in ["PYTHONPATH", "MODULEPATH"]: if env_var in os.environ: easybuild_vars[env_var] = os.environ[env_var] _log.info("Dictionary of environment variables passed to job: %s" % easybuild_vars) # obtain unique name based on name/easyconfig version tuple ec_tuple = (easyconfig['ec']['name'], det_full_ec_version(easyconfig['ec'])) name = '-'.join(ec_tuple) # determine whether additional options need to be passed to the 'eb' command add_opts = '' if easyconfig['hidden']: add_opts += ' --hidden' # create command based on build_command template command = build_command % { 'add_opts': add_opts, 'output_dir': os.path.join(os.path.abspath(output_dir), name), 'spec': easyconfig['spec'], } # just use latest build stats repo = init_repository(get_repository(), get_repositorypath()) buildstats = repo.get_buildstats(*ec_tuple) extra = {} if buildstats: previous_time = buildstats[-1]['build_time'] extra['hours'] = int(math.ceil(previous_time * 2 / 60)) if build_option('job_cores'): extra['cores'] = build_option('job_cores') job = job_backend.make_job(command, name, easybuild_vars, **extra) job.module = easyconfig['ec'].full_mod_name return job
def create_job(build_command, easyconfig, output_dir="", conn=None, ppn=None): """ Creates a job, to build a *single* easyconfig build_command is a format string in which a full path to an eb file will be substituted easyconfig should be in the format as processEasyConfig returns them output_dir is an optional path. EASYBUILDTESTOUTPUT will be set inside the job with this variable returns the job """ # create command based on build_command template command = build_command % {'spec': easyconfig['spec']} # capture PYTHONPATH, MODULEPATH and all variables starting with EASYBUILD easybuild_vars = {} for name in os.environ: if name.startswith("EASYBUILD"): easybuild_vars[name] = os.environ[name] others = ["PYTHONPATH", "MODULEPATH"] for env_var in others: if env_var in os.environ: easybuild_vars[env_var] = os.environ[env_var] _log.info("Dictionary of environment variables passed to job: %s" % easybuild_vars) # obtain unique name based on name/easyconfig version tuple ec_tuple = (easyconfig['ec']['name'], det_full_ec_version(easyconfig['ec'])) name = '-'.join(ec_tuple) var = config.oldstyle_environment_variables['test_output_path'] easybuild_vars[var] = os.path.join(os.path.abspath(output_dir), name) # just use latest build stats repo = init_repository(get_repository(), get_repositorypath()) buildstats = repo.get_buildstats(*ec_tuple) resources = {} if buildstats: previous_time = buildstats[-1]['build_time'] resources['hours'] = int(math.ceil(previous_time * 2 / 60)) job = PbsJob(command, name, easybuild_vars, resources=resources, conn=conn, ppn=ppn) job.module = det_full_module_name(easyconfig['ec']) return job
def create_job(build_command, easyconfig, output_dir="", conn=None, ppn=None): """ Creates a job, to build a *single* easyconfig build_command is a format string in which a full path to an eb file will be substituted easyconfig should be in the format as processEasyConfig returns them output_dir is an optional path. EASYBUILDTESTOUTPUT will be set inside the job with this variable returns the job """ # create command based on build_command template command = build_command % {"spec": easyconfig["spec"]} # capture PYTHONPATH, MODULEPATH and all variables starting with EASYBUILD easybuild_vars = {} for name in os.environ: if name.startswith("EASYBUILD"): easybuild_vars[name] = os.environ[name] others = ["PYTHONPATH", "MODULEPATH"] for env_var in others: if env_var in os.environ: easybuild_vars[env_var] = os.environ[env_var] _log.info("Dictionary of environment variables passed to job: %s" % easybuild_vars) # create unique name based on module name name = "%s-%s" % easyconfig["module"] var = config.oldstyle_environment_variables["test_output_path"] easybuild_vars[var] = os.path.join(os.path.abspath(output_dir), name) # just use latest build stats buildstats = get_repository().get_buildstats(*easyconfig["module"]) resources = {} if buildstats: previous_time = buildstats[-1]["build_time"] resources["hours"] = int(math.ceil(previous_time * 2 / 60)) job = PbsJob(command, name, easybuild_vars, resources=resources, conn=conn, ppn=ppn) job.module = easyconfig["module"] return job
def main(args=None, logfile=None, do_build=None, testing=False): """ Main function: parse command line options, and act accordingly. @param args: command line arguments to use @param logfile: log file to use @param do_build: whether or not to actually perform the build @param testing: enable testing mode """ # purposely session state very early, to avoid modules loaded by EasyBuild meddling in init_session_state = session_state() # initialise options eb_go = eboptions.parse_options(args=args) options = eb_go.options orig_paths = eb_go.args # set umask (as early as possible) if options.umask is not None: new_umask = int(options.umask, 8) old_umask = os.umask(new_umask) # set by option parsers via set_tmpdir eb_tmpdir = tempfile.gettempdir() # initialise logging for main global _log _log, logfile = init_logging(logfile, logtostdout=options.logtostdout, silent=testing or options.last_log) # disallow running EasyBuild as root if os.getuid() == 0: raise EasyBuildError( "You seem to be running EasyBuild with root privileges which is not wise, " "so let's end this here." ) # log startup info eb_cmd_line = eb_go.generate_cmd_line() + eb_go.args log_start(eb_cmd_line, eb_tmpdir) if options.umask is not None: _log.info("umask set to '%s' (used to be '%s')" % (oct(new_umask), oct(old_umask))) # process software build specifications (if any), i.e. # software name/version, toolchain name/version, extra patches, ... (try_to_generate, build_specs) = process_software_build_specs(options) # determine robot path # --try-X, --dep-graph, --search use robot path for searching, so enable it with path of installed easyconfigs tweaked_ecs = try_to_generate and build_specs tweaked_ecs_path, pr_path = alt_easyconfig_paths(eb_tmpdir, tweaked_ecs=tweaked_ecs, from_pr=options.from_pr) auto_robot = try_to_generate or options.dep_graph or options.search or options.search_short robot_path = det_robot_path(options.robot_paths, tweaked_ecs_path, pr_path, auto_robot=auto_robot) _log.debug("Full robot path: %s" % robot_path) # configure & initialize build options config_options_dict = eb_go.get_options_by_section("config") build_options = { "build_specs": build_specs, "command_line": eb_cmd_line, "pr_path": pr_path, "robot_path": robot_path, "silent": testing, "try_to_generate": try_to_generate, "valid_stops": [x[0] for x in EasyBlock.get_steps()], } # initialise the EasyBuild configuration & build options config.init(options, config_options_dict) config.init_build_options(build_options=build_options, cmdline_options=options) if options.last_log: # print location to last log file, and exit last_log = find_last_log(logfile) or "(none)" print_msg(last_log, log=_log, prefix=False) cleanup(logfile, eb_tmpdir, testing, silent=True) sys.exit(0) # check whether packaging is supported when it's being used if options.package: check_pkg_support() else: _log.debug("Packaging not enabled, so not checking for packaging support.") # update session state eb_config = eb_go.generate_cmd_line(add_default=True) modlist = session_module_list(testing=testing) # build options must be initialized first before 'module list' works init_session_state.update({"easybuild_configuration": eb_config}) init_session_state.update({"module_list": modlist}) _log.debug("Initial session state: %s" % init_session_state) # GitHub integration if options.review_pr or options.new_pr or options.update_pr: if options.review_pr: print review_pr(options.review_pr, colored=options.color) elif options.new_pr: new_pr(orig_paths, title=options.pr_title, descr=options.pr_descr, commit_msg=options.pr_commit_msg) elif options.update_pr: update_pr(options.update_pr, orig_paths, commit_msg=options.pr_commit_msg) cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # search for easyconfigs, if a query is specified query = options.search or options.search_short if query: search_easyconfigs(query, short=not options.search) # determine easybuild-easyconfigs package install path easyconfigs_pkg_paths = get_paths_for(subdir=EASYCONFIGS_PKG_SUBDIR) if not easyconfigs_pkg_paths: _log.warning("Failed to determine install path for easybuild-easyconfigs package.") # command line options that do not require any easyconfigs to be specified no_ec_opts = [ options.aggregate_regtest, options.new_pr, options.review_pr, options.search, options.search_short, options.regtest, options.update_pr, ] # determine paths to easyconfigs paths = det_easyconfig_paths(orig_paths) if paths: # transform paths into tuples, use 'False' to indicate the corresponding easyconfig files were not generated paths = [(p, False) for p in paths] else: if "name" in build_specs: # try to obtain or generate an easyconfig file via build specifications if a software name is provided paths = find_easyconfigs_by_specs(build_specs, robot_path, try_to_generate, testing=testing) elif not any(no_ec_opts): print_error( ( "Please provide one or multiple easyconfig files, or use software build " "options to make EasyBuild search for easyconfigs" ), log=_log, opt_parser=eb_go.parser, exit_on_error=not testing, ) _log.debug("Paths: %s" % paths) # run regtest if options.regtest or options.aggregate_regtest: _log.info("Running regression test") # fallback: easybuild-easyconfigs install path regtest_ok = regtest([path[0] for path in paths] or easyconfigs_pkg_paths) if not regtest_ok: _log.info("Regression test failed (partially)!") sys.exit(31) # exit -> 3x1t -> 31 # read easyconfig files easyconfigs, generated_ecs = parse_easyconfigs(paths) # tweak obtained easyconfig files, if requested # don't try and tweak anything if easyconfigs were generated, since building a full dep graph will fail # if easyconfig files for the dependencies are not available if try_to_generate and build_specs and not generated_ecs: easyconfigs = tweak(easyconfigs, build_specs, targetdir=tweaked_ecs_path) # dry_run: print all easyconfigs and dependencies, and whether they are already built if options.dry_run or options.dry_run_short: txt = dry_run(easyconfigs, short=not options.dry_run) print_msg(txt, log=_log, silent=testing, prefix=False) # cleanup and exit after dry run, searching easyconfigs or submitting regression test if any(no_ec_opts + [options.dry_run, options.dry_run_short]): cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # skip modules that are already installed unless forced if not (options.force or options.rebuild or options.extended_dry_run): retained_ecs = skip_available(easyconfigs) if not testing: for skipped_ec in [ec for ec in easyconfigs if ec not in retained_ecs]: print_msg("%s is already installed (module found), skipping" % skipped_ec["full_mod_name"]) easyconfigs = retained_ecs # determine an order that will allow all specs in the set to build if len(easyconfigs) > 0: if options.robot: print_msg("resolving dependencies ...", log=_log, silent=testing) ordered_ecs = resolve_dependencies( easyconfigs, minimal_toolchains=build_option("minimal_toolchains"), use_existing_modules=build_option("use_existing_modules"), ) else: ordered_ecs = easyconfigs else: print_msg("No easyconfigs left to be built.", log=_log, silent=testing) ordered_ecs = [] # create dependency graph and exit if options.dep_graph: _log.info("Creating dependency graph %s" % options.dep_graph) dep_graph(options.dep_graph, ordered_ecs) sys.exit(0) # submit build as job(s), clean up and exit if options.job: submit_jobs(ordered_ecs, eb_go.generate_cmd_line(), testing=testing) if not testing: print_msg("Submitted parallel build jobs, exiting now") cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # build software, will exit when errors occurs (except when testing) exit_on_failure = not options.dump_test_report and not options.upload_test_report if not testing or (testing and do_build): ecs_with_res = build_and_install_software(ordered_ecs, init_session_state, exit_on_failure=exit_on_failure) else: ecs_with_res = [(ec, {}) for ec in ordered_ecs] correct_builds_cnt = len([ec_res for (_, ec_res) in ecs_with_res if ec_res.get("success", False)]) overall_success = correct_builds_cnt == len(ordered_ecs) success_msg = "Build succeeded for %s out of %s" % (correct_builds_cnt, len(ordered_ecs)) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # dump/upload overall test report test_report_msg = overall_test_report(ecs_with_res, len(paths), overall_success, success_msg, init_session_state) if test_report_msg is not None: print_msg(test_report_msg) print_msg(success_msg, log=_log, silent=testing) # cleanup and spec files for ec in easyconfigs: if "original_spec" in ec and os.path.isfile(ec["spec"]): os.remove(ec["spec"]) # stop logging and cleanup tmp log file, unless one build failed (individual logs are located in eb_tmpdir) stop_logging(logfile, logtostdout=options.logtostdout) if overall_success: cleanup(logfile, eb_tmpdir, testing)
sys.exit(0) # build software, will exit when errors occurs (except when regtesting) correct_built_cnt = 0 all_built_cnt = 0 if not testing or (testing and do_build): for ec in ordered_ecs: (success, _) = build_and_install_software(ec, orig_environ) if success: correct_built_cnt += 1 all_built_cnt += 1 print_msg("Build succeeded for %s out of %s" % (correct_built_cnt, all_built_cnt), log=_log, silent=testing) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # cleanup and spec files for ec in easyconfigs: if 'original_spec' in ec and os.path.isfile(ec['spec']): os.remove(ec['spec']) # cleanup tmp log file (all is well, all modules have their own log file) if options.logtostdout: fancylogger.logToScreen(enable=False, stdout=True) else: fancylogger.logToFile(logfile, enable=False) cleanup(logfile, eb_tmpdir, testing)
def main(args=None, logfile=None, do_build=None, testing=False, modtool=None): """ Main function: parse command line options, and act accordingly. :param args: command line arguments to use :param logfile: log file to use :param do_build: whether or not to actually perform the build :param testing: enable testing mode """ register_lock_cleanup_signal_handlers() # if $CDPATH is set, unset it, it'll only cause trouble... # see https://github.com/easybuilders/easybuild-framework/issues/2944 if 'CDPATH' in os.environ: del os.environ['CDPATH'] # purposely session state very early, to avoid modules loaded by EasyBuild meddling in init_session_state = session_state() eb_go, cfg_settings = set_up_configuration(args=args, logfile=logfile, testing=testing) options, orig_paths = eb_go.options, eb_go.args global _log (build_specs, _log, logfile, robot_path, search_query, eb_tmpdir, try_to_generate, tweaked_ecs_paths) = cfg_settings # load hook implementations (if any) hooks = load_hooks(options.hooks) run_hook(START, hooks) if modtool is None: modtool = modules_tool(testing=testing) # check whether any (EasyBuild-generated) modules are loaded already in the current session modtool.check_loaded_modules() if options.last_log: # print location to last log file, and exit last_log = find_last_log(logfile) or '(none)' print_msg(last_log, log=_log, prefix=False) # check whether packaging is supported when it's being used if options.package: check_pkg_support() else: _log.debug("Packaging not enabled, so not checking for packaging support.") # search for easyconfigs, if a query is specified if search_query: search_easyconfigs(search_query, short=options.search_short, filename_only=options.search_filename, terse=options.terse) # GitHub options that warrant a silent cleanup & exit if options.check_github: check_github() elif options.install_github_token: install_github_token(options.github_user, silent=build_option('silent')) elif options.close_pr: close_pr(options.close_pr, motivation_msg=options.close_pr_msg) elif options.list_prs: print(list_prs(options.list_prs)) elif options.merge_pr: merge_pr(options.merge_pr) elif options.review_pr: print(review_pr(pr=options.review_pr, colored=use_color(options.color))) elif options.list_installed_software: detailed = options.list_installed_software == 'detailed' print(list_software(output_format=options.output_format, detailed=detailed, only_installed=True)) elif options.list_software: print(list_software(output_format=options.output_format, detailed=options.list_software == 'detailed')) elif options.create_index: print_msg("Creating index for %s..." % options.create_index, prefix=False) index_fp = dump_index(options.create_index, max_age_sec=options.index_max_age) index = load_index(options.create_index) print_msg("Index created at %s (%d files)" % (index_fp, len(index)), prefix=False) # non-verbose cleanup after handling GitHub integration stuff or printing terse info early_stop_options = [ options.check_github, options.create_index, options.install_github_token, options.list_installed_software, options.list_software, options.close_pr, options.list_prs, options.merge_pr, options.review_pr, options.terse, search_query, ] if any(early_stop_options): clean_exit(logfile, eb_tmpdir, testing, silent=True) # update session state eb_config = eb_go.generate_cmd_line(add_default=True) modlist = modtool.list() # build options must be initialized first before 'module list' works init_session_state.update({'easybuild_configuration': eb_config}) init_session_state.update({'module_list': modlist}) _log.debug("Initial session state: %s" % init_session_state) # determine easybuild-easyconfigs package install path easyconfigs_pkg_paths = get_paths_for(subdir=EASYCONFIGS_PKG_SUBDIR) if not easyconfigs_pkg_paths: _log.warning("Failed to determine install path for easybuild-easyconfigs package.") if options.install_latest_eb_release: if orig_paths: raise EasyBuildError("Installing the latest EasyBuild release can not be combined with installing " "other easyconfigs") else: eb_file = find_easybuild_easyconfig() orig_paths.append(eb_file) if len(orig_paths) == 1: # if only one easyconfig file is specified, use current directory as target directory target_path = os.getcwd() elif orig_paths: # last path is target when --copy-ec is used, so remove that from the list target_path = orig_paths.pop() if options.copy_ec else None categorized_paths = categorize_files_by_type(orig_paths) # command line options that do not require any easyconfigs to be specified pr_options = options.new_branch_github or options.new_pr or options.new_pr_from_branch or options.preview_pr pr_options = pr_options or options.sync_branch_with_develop or options.sync_pr_with_develop pr_options = pr_options or options.update_branch_github or options.update_pr no_ec_opts = [options.aggregate_regtest, options.regtest, pr_options, search_query] # determine paths to easyconfigs determined_paths = det_easyconfig_paths(categorized_paths['easyconfigs']) if (options.copy_ec and not tweaked_ecs_paths) or options.fix_deprecated_easyconfigs or options.show_ec: if options.copy_ec: if len(determined_paths) == 1: copy_file(determined_paths[0], target_path) print_msg("%s copied to %s" % (os.path.basename(determined_paths[0]), target_path), prefix=False) elif len(determined_paths) > 1: copy_files(determined_paths, target_path) print_msg("%d file(s) copied to %s" % (len(determined_paths), target_path), prefix=False) else: raise EasyBuildError("One of more files to copy should be specified!") elif options.fix_deprecated_easyconfigs: fix_deprecated_easyconfigs(determined_paths) elif options.show_ec: for path in determined_paths: print_msg("Contents of %s:" % path) print_msg(read_file(path), prefix=False) clean_exit(logfile, eb_tmpdir, testing) if determined_paths: # transform paths into tuples, use 'False' to indicate the corresponding easyconfig files were not generated paths = [(p, False) for p in determined_paths] elif 'name' in build_specs: # try to obtain or generate an easyconfig file via build specifications if a software name is provided paths = find_easyconfigs_by_specs(build_specs, robot_path, try_to_generate, testing=testing) elif any(no_ec_opts): paths = determined_paths else: print_error("Please provide one or multiple easyconfig files, or use software build " + "options to make EasyBuild search for easyconfigs", log=_log, opt_parser=eb_go.parser, exit_on_error=not testing) _log.debug("Paths: %s", paths) # run regtest if options.regtest or options.aggregate_regtest: _log.info("Running regression test") # fallback: easybuild-easyconfigs install path regtest_ok = regtest([path[0] for path in paths] or easyconfigs_pkg_paths, modtool) if not regtest_ok: _log.info("Regression test failed (partially)!") sys.exit(31) # exit -> 3x1t -> 31 # read easyconfig files easyconfigs, generated_ecs = parse_easyconfigs(paths, validate=not options.inject_checksums) # handle --check-contrib & --check-style options if run_contrib_style_checks([ec['ec'] for ec in easyconfigs], options.check_contrib, options.check_style): clean_exit(logfile, eb_tmpdir, testing) # verify easyconfig filenames, if desired if options.verify_easyconfig_filenames: _log.info("Verifying easyconfig filenames...") for easyconfig in easyconfigs: verify_easyconfig_filename(easyconfig['spec'], easyconfig['ec'], parsed_ec=easyconfig['ec']) # tweak obtained easyconfig files, if requested # don't try and tweak anything if easyconfigs were generated, since building a full dep graph will fail # if easyconfig files for the dependencies are not available if try_to_generate and build_specs and not generated_ecs: easyconfigs = tweak(easyconfigs, build_specs, modtool, targetdirs=tweaked_ecs_paths) if options.containerize: # if --containerize/-C create a container recipe (and optionally container image), and stop containerize(easyconfigs) clean_exit(logfile, eb_tmpdir, testing) forced = options.force or options.rebuild dry_run_mode = options.dry_run or options.dry_run_short or options.missing_modules # skip modules that are already installed unless forced, or unless an option is used that warrants not skipping if not (forced or dry_run_mode or options.extended_dry_run or pr_options or options.inject_checksums): retained_ecs = skip_available(easyconfigs, modtool) if not testing: for skipped_ec in [ec for ec in easyconfigs if ec not in retained_ecs]: print_msg("%s is already installed (module found), skipping" % skipped_ec['full_mod_name']) easyconfigs = retained_ecs # keep track for which easyconfigs we should set the corresponding module as default if options.set_default_module: for easyconfig in easyconfigs: easyconfig['ec'].set_default_module = True # determine an order that will allow all specs in the set to build if len(easyconfigs) > 0: # resolve dependencies if robot is enabled, except in dry run mode # one exception: deps *are* resolved with --new-pr or --update-pr when dry run mode is enabled if options.robot and (not dry_run_mode or pr_options): print_msg("resolving dependencies ...", log=_log, silent=testing) ordered_ecs = resolve_dependencies(easyconfigs, modtool) else: ordered_ecs = easyconfigs elif pr_options: ordered_ecs = None else: print_msg("No easyconfigs left to be built.", log=_log, silent=testing) ordered_ecs = [] if options.copy_ec and tweaked_ecs_paths: all_specs = [spec['spec'] for spec in resolve_dependencies(easyconfigs, modtool, retain_all_deps=True, raise_error_missing_ecs=False)] tweaked_ecs_in_all_ecs = [path for path in all_specs if any(tweaked_ecs_path in path for tweaked_ecs_path in tweaked_ecs_paths)] if tweaked_ecs_in_all_ecs: # Clean them, then copy them clean_up_easyconfigs(tweaked_ecs_in_all_ecs) copy_files(tweaked_ecs_in_all_ecs, target_path) print_msg("%d file(s) copied to %s" % (len(tweaked_ecs_in_all_ecs), target_path), prefix=False) # creating/updating PRs if pr_options: if options.new_pr: new_pr(categorized_paths, ordered_ecs) elif options.new_branch_github: new_branch_github(categorized_paths, ordered_ecs) elif options.new_pr_from_branch: new_pr_from_branch(options.new_pr_from_branch) elif options.preview_pr: print(review_pr(paths=determined_paths, colored=use_color(options.color))) elif options.sync_branch_with_develop: sync_branch_with_develop(options.sync_branch_with_develop) elif options.sync_pr_with_develop: sync_pr_with_develop(options.sync_pr_with_develop) elif options.update_branch_github: update_branch(options.update_branch_github, categorized_paths, ordered_ecs) elif options.update_pr: update_pr(options.update_pr, categorized_paths, ordered_ecs) else: raise EasyBuildError("Unknown PR option!") # dry_run: print all easyconfigs and dependencies, and whether they are already built elif dry_run_mode: if options.missing_modules: txt = missing_deps(easyconfigs, modtool) else: txt = dry_run(easyconfigs, modtool, short=not options.dry_run) print_msg(txt, log=_log, silent=testing, prefix=False) elif options.check_conflicts: if check_conflicts(easyconfigs, modtool): print_error("One or more conflicts detected!") sys.exit(1) else: print_msg("\nNo conflicts detected!\n", prefix=False) # dump source script to set up build environment elif options.dump_env_script: dump_env_script(easyconfigs) elif options.inject_checksums: inject_checksums(ordered_ecs, options.inject_checksums) # cleanup and exit after dry run, searching easyconfigs or submitting regression test stop_options = [options.check_conflicts, dry_run_mode, options.dump_env_script, options.inject_checksums] if any(no_ec_opts) or any(stop_options): clean_exit(logfile, eb_tmpdir, testing) # create dependency graph and exit if options.dep_graph: _log.info("Creating dependency graph %s" % options.dep_graph) dep_graph(options.dep_graph, ordered_ecs) clean_exit(logfile, eb_tmpdir, testing, silent=True) # submit build as job(s), clean up and exit if options.job: submit_jobs(ordered_ecs, eb_go.generate_cmd_line(), testing=testing) if not testing: print_msg("Submitted parallel build jobs, exiting now") clean_exit(logfile, eb_tmpdir, testing) # build software, will exit when errors occurs (except when testing) if not testing or (testing and do_build): exit_on_failure = not (options.dump_test_report or options.upload_test_report) ecs_with_res = build_and_install_software(ordered_ecs, init_session_state, exit_on_failure=exit_on_failure) else: ecs_with_res = [(ec, {}) for ec in ordered_ecs] correct_builds_cnt = len([ec_res for (_, ec_res) in ecs_with_res if ec_res.get('success', False)]) overall_success = correct_builds_cnt == len(ordered_ecs) success_msg = "Build succeeded for %s out of %s" % (correct_builds_cnt, len(ordered_ecs)) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # dump/upload overall test report test_report_msg = overall_test_report(ecs_with_res, len(paths), overall_success, success_msg, init_session_state) if test_report_msg is not None: print_msg(test_report_msg) print_msg(success_msg, log=_log, silent=testing) # cleanup and spec files for ec in easyconfigs: if 'original_spec' in ec and os.path.isfile(ec['spec']): os.remove(ec['spec']) run_hook(END, hooks) # stop logging and cleanup tmp log file, unless one build failed (individual logs are located in eb_tmpdir) stop_logging(logfile, logtostdout=options.logtostdout) if overall_success: cleanup(logfile, eb_tmpdir, testing)
def test_legacy_config_file(self): """Test finding/using legacy configuration files.""" self.purge_environment() cfg_fn = self.configure(args=[]) self.assertTrue(cfg_fn.endswith('easybuild/easybuild_config.py')) configtxt = """ build_path = '%(buildpath)s' source_path = '%(sourcepath)s' install_path = '%(installpath)s' repository_path = '%(repopath)s' repository = FileRepository(repository_path) log_format = ('%(logdir)s', '%(logtmpl)s') log_dir = '%(tmplogdir)s' software_install_suffix = '%(softsuffix)s' modules_install_suffix = '%(modsuffix)s' """ buildpath = os.path.join(self.tmpdir, 'my', 'test', 'build', 'path') sourcepath = os.path.join(self.tmpdir, 'my', 'test', 'source', 'path') installpath = os.path.join(self.tmpdir, 'my', 'test', 'install', 'path') repopath = os.path.join(self.tmpdir, 'my', 'test', 'repo', 'path') logdir = 'somedir' logtmpl = 'test-eb-%(name)s%(version)s_date-%(date)s__time-%(time)s.log' tmplogdir = os.path.join(self.tmpdir, 'my', 'test', 'tmplogdir') softsuffix = 'myfavoritesoftware' modsuffix = 'modulesgohere' configdict = { 'buildpath': buildpath, 'sourcepath': sourcepath, 'installpath': installpath, 'repopath': repopath, 'logdir': logdir, 'logtmpl': logtmpl, 'tmplogdir': tmplogdir, 'softsuffix': softsuffix, 'modsuffix': modsuffix } # create user config file on default location myconfigfile = os.path.join(self.tmpdir, '.easybuild', 'config.py') if not os.path.exists(os.path.dirname(myconfigfile)): os.makedirs(os.path.dirname(myconfigfile)) write_file(myconfigfile, configtxt % configdict) # redefine home so we can test user config file on default location home = os.environ.get('HOME', None) os.environ['HOME'] = self.tmpdir init_config() cfg_fn = self.configure(args=[]) if home is not None: os.environ['HOME'] = home # check finding and use of config file self.assertEqual(cfg_fn, myconfigfile) self.assertEqual(build_path(), buildpath) self.assertEqual(source_paths()[0], sourcepath) self.assertEqual(install_path(), os.path.join(installpath, softsuffix)) self.assertEqual(install_path(typ='mod'), os.path.join(installpath, modsuffix)) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, repopath) self.assertEqual(log_file_format(return_directory=True), logdir) self.assertEqual(log_file_format(), logtmpl) self.assertEqual(get_build_log_path(), tmplogdir) # redefine config file entries for proper testing below buildpath = os.path.join(self.tmpdir, 'my', 'custom', 'test', 'build', 'path') sourcepath = os.path.join(self.tmpdir, 'my', 'custom', 'test', 'source', 'path') installpath = os.path.join(self.tmpdir, 'my', 'custom', 'test', 'install', 'path') repopath = os.path.join(self.tmpdir, 'my', 'custom', 'test', 'repo', 'path') logdir = 'somedir_custom' logtmpl = 'test-custom-eb-%(name)_%(date)s%(time)s__%(version)s.log' tmplogdir = os.path.join(self.tmpdir, 'my', 'custom', 'test', 'tmplogdir') softsuffix = 'myfavoritesoftware_custom' modsuffix = 'modulesgohere_custom' configdict = { 'buildpath': buildpath, 'sourcepath': sourcepath, 'installpath': installpath, 'repopath': repopath, 'logdir': logdir, 'logtmpl': logtmpl, 'tmplogdir': tmplogdir, 'softsuffix': softsuffix, 'modsuffix': modsuffix } # create custom config file, and point to it mycustomconfigfile = os.path.join(self.tmpdir, 'mycustomconfig.py') if not os.path.exists(os.path.dirname(mycustomconfigfile)): os.makedirs(os.path.dirname(mycustomconfigfile)) write_file(mycustomconfigfile, configtxt % configdict) os.environ['EASYBUILDCONFIG'] = mycustomconfigfile # reconfigure init_config() cfg_fn = self.configure(args=[]) # verify configuration self.assertEqual(cfg_fn, mycustomconfigfile) self.assertEqual(build_path(), buildpath) self.assertEqual(source_paths()[0], sourcepath) self.assertEqual(install_path(), os.path.join(installpath, softsuffix)) self.assertEqual(install_path(typ='mod'), os.path.join(installpath, modsuffix)) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, repopath) self.assertEqual(log_file_format(return_directory=True), logdir) self.assertEqual(log_file_format(), logtmpl) self.assertEqual(get_build_log_path(), tmplogdir)
def test_legacy_env_vars(self): """Test legacy environment variables.""" self.purge_environment() # build path test_buildpath = os.path.join(self.tmpdir, 'build', 'path') os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) del os.environ['EASYBUILDBUILDPATH'] # source path(s) test_sourcepaths = [ os.path.join(self.tmpdir, 'source', 'path'), ':'.join([ os.path.join(self.tmpdir, 'source', 'path1'), os.path.join(self.tmpdir, 'source', 'path2'), ]), ':'.join([ os.path.join(self.tmpdir, 'source', 'path1'), os.path.join(self.tmpdir, 'source', 'path2'), os.path.join(self.tmpdir, 'source', 'path3'), ]), ] for test_sourcepath in test_sourcepaths: init_config() os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_paths(), test_sourcepath.split(':')) del os.environ['EASYBUILDSOURCEPATH'] test_sourcepath = os.path.join(self.tmpdir, 'source', 'path') # install path init_config() test_installpath = os.path.join(self.tmpdir, 'install', 'path') os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual(source_paths()[0], os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) del os.environ['EASYBUILDINSTALLPATH'] # prefix: should change build/install/source/repo paths init_config() test_prefixpath = os.path.join(self.tmpdir, 'prefix', 'path') os.environ['EASYBUILDPREFIX'] = test_prefixpath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_paths()[0], os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) # build/source/install path overrides prefix init_config() os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) self.assertEqual(source_paths()[0], os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDBUILDPATH'] init_config() os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_paths()[0], test_sourcepath) self.assertEqual(install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDSOURCEPATH'] init_config() os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_paths()[0], os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath']))
def main(args=None, logfile=None, do_build=None, testing=False, modtool=None): """ Main function: parse command line options, and act accordingly. :param args: command line arguments to use :param logfile: log file to use :param do_build: whether or not to actually perform the build :param testing: enable testing mode """ # purposely session state very early, to avoid modules loaded by EasyBuild meddling in init_session_state = session_state() # initialise options eb_go = eboptions.parse_options(args=args) options = eb_go.options orig_paths = eb_go.args # set umask (as early as possible) if options.umask is not None: new_umask = int(options.umask, 8) old_umask = os.umask(new_umask) # set by option parsers via set_tmpdir eb_tmpdir = tempfile.gettempdir() search_query = options.search or options.search_filename or options.search_short # initialise logging for main global _log _log, logfile = init_logging(logfile, logtostdout=options.logtostdout, silent=(testing or options.terse or search_query), colorize=options.color) # disallow running EasyBuild as root if os.getuid() == 0: raise EasyBuildError("You seem to be running EasyBuild with root privileges which is not wise, " "so let's end this here.") # log startup info eb_cmd_line = eb_go.generate_cmd_line() + eb_go.args log_start(eb_cmd_line, eb_tmpdir) if options.umask is not None: _log.info("umask set to '%s' (used to be '%s')" % (oct(new_umask), oct(old_umask))) # process software build specifications (if any), i.e. # software name/version, toolchain name/version, extra patches, ... (try_to_generate, build_specs) = process_software_build_specs(options) # determine robot path # --try-X, --dep-graph, --search use robot path for searching, so enable it with path of installed easyconfigs tweaked_ecs = try_to_generate and build_specs tweaked_ecs_paths, pr_path = alt_easyconfig_paths(eb_tmpdir, tweaked_ecs=tweaked_ecs, from_pr=options.from_pr) auto_robot = try_to_generate or options.check_conflicts or options.dep_graph or search_query robot_path = det_robot_path(options.robot_paths, tweaked_ecs_paths, pr_path, auto_robot=auto_robot) _log.debug("Full robot path: %s" % robot_path) # configure & initialize build options config_options_dict = eb_go.get_options_by_section('config') build_options = { 'build_specs': build_specs, 'command_line': eb_cmd_line, 'external_modules_metadata': parse_external_modules_metadata(options.external_modules_metadata), 'pr_path': pr_path, 'robot_path': robot_path, 'silent': testing, 'try_to_generate': try_to_generate, 'valid_stops': [x[0] for x in EasyBlock.get_steps()], } # initialise the EasyBuild configuration & build options config.init(options, config_options_dict) config.init_build_options(build_options=build_options, cmdline_options=options) if modtool is None: modtool = modules_tool(testing=testing) if options.last_log: # print location to last log file, and exit last_log = find_last_log(logfile) or '(none)' print_msg(last_log, log=_log, prefix=False) # check whether packaging is supported when it's being used if options.package: check_pkg_support() else: _log.debug("Packaging not enabled, so not checking for packaging support.") # search for easyconfigs, if a query is specified if search_query: search_easyconfigs(search_query, short=options.search_short, filename_only=options.search_filename, terse=options.terse) # GitHub options that warrant a silent cleanup & exit if options.check_github: check_github() elif options.install_github_token: install_github_token(options.github_user, silent=build_option('silent')) elif options.review_pr: print review_pr(options.review_pr, colored=use_color(options.color)) elif options.list_installed_software: detailed = options.list_installed_software == 'detailed' print list_software(output_format=options.output_format, detailed=detailed, only_installed=True) elif options.list_software: print list_software(output_format=options.output_format, detailed=options.list_software == 'detailed') # non-verbose cleanup after handling GitHub integration stuff or printing terse info early_stop_options = [ options.check_github, options.install_github_token, options.list_installed_software, options.list_software, options.review_pr, options.terse, search_query, ] if any(early_stop_options): cleanup(logfile, eb_tmpdir, testing, silent=True) sys.exit(0) # update session state eb_config = eb_go.generate_cmd_line(add_default=True) modlist = modtool.list() # build options must be initialized first before 'module list' works init_session_state.update({'easybuild_configuration': eb_config}) init_session_state.update({'module_list': modlist}) _log.debug("Initial session state: %s" % init_session_state) # determine easybuild-easyconfigs package install path easyconfigs_pkg_paths = get_paths_for(subdir=EASYCONFIGS_PKG_SUBDIR) if not easyconfigs_pkg_paths: _log.warning("Failed to determine install path for easybuild-easyconfigs package.") if options.install_latest_eb_release: if orig_paths: raise EasyBuildError("Installing the latest EasyBuild release can not be combined with installing " "other easyconfigs") else: eb_file = find_easybuild_easyconfig() orig_paths.append(eb_file) categorized_paths = categorize_files_by_type(orig_paths) # command line options that do not require any easyconfigs to be specified no_ec_opts = [options.aggregate_regtest, options.new_pr, options.regtest, options.update_pr, search_query] # determine paths to easyconfigs paths = det_easyconfig_paths(categorized_paths['easyconfigs']) if paths: # transform paths into tuples, use 'False' to indicate the corresponding easyconfig files were not generated paths = [(p, False) for p in paths] else: if 'name' in build_specs: # try to obtain or generate an easyconfig file via build specifications if a software name is provided paths = find_easyconfigs_by_specs(build_specs, robot_path, try_to_generate, testing=testing) elif not any(no_ec_opts): print_error(("Please provide one or multiple easyconfig files, or use software build " "options to make EasyBuild search for easyconfigs"), log=_log, opt_parser=eb_go.parser, exit_on_error=not testing) _log.debug("Paths: %s" % paths) # run regtest if options.regtest or options.aggregate_regtest: _log.info("Running regression test") # fallback: easybuild-easyconfigs install path regtest_ok = regtest([path[0] for path in paths] or easyconfigs_pkg_paths, modtool) if not regtest_ok: _log.info("Regression test failed (partially)!") sys.exit(31) # exit -> 3x1t -> 31 if options.check_style: _log.debug("Running style check...") if cmdline_easyconfigs_style_check([path[0] for path in paths]): print_msg("All style checks passed!", prefix=False) cleanup(logfile, eb_tmpdir, testing) sys.exit(0) else: raise EasyBuildError("One or more style checks FAILED!") # read easyconfig files easyconfigs, generated_ecs = parse_easyconfigs(paths) # tweak obtained easyconfig files, if requested # don't try and tweak anything if easyconfigs were generated, since building a full dep graph will fail # if easyconfig files for the dependencies are not available if try_to_generate and build_specs and not generated_ecs: easyconfigs = tweak(easyconfigs, build_specs, modtool, targetdirs=tweaked_ecs_paths) dry_run_mode = options.dry_run or options.dry_run_short new_update_pr = options.new_pr or options.update_pr # skip modules that are already installed unless forced if not (options.force or options.rebuild or dry_run_mode or options.extended_dry_run or new_update_pr): retained_ecs = skip_available(easyconfigs, modtool) if not testing: for skipped_ec in [ec for ec in easyconfigs if ec not in retained_ecs]: print_msg("%s is already installed (module found), skipping" % skipped_ec['full_mod_name']) easyconfigs = retained_ecs # determine an order that will allow all specs in the set to build if len(easyconfigs) > 0: # resolve dependencies if robot is enabled, except in dry run mode # one exception: deps *are* resolved with --new-pr or --update-pr when dry run mode is enabled if options.robot and (not dry_run_mode or new_update_pr): print_msg("resolving dependencies ...", log=_log, silent=testing) ordered_ecs = resolve_dependencies(easyconfigs, modtool) else: ordered_ecs = easyconfigs elif new_update_pr: ordered_ecs = None else: print_msg("No easyconfigs left to be built.", log=_log, silent=testing) ordered_ecs = [] # creating/updating PRs if new_update_pr: if options.new_pr: new_pr(categorized_paths, ordered_ecs, title=options.pr_title, descr=options.pr_descr, commit_msg=options.pr_commit_msg) else: update_pr(options.update_pr, categorized_paths, ordered_ecs, commit_msg=options.pr_commit_msg) cleanup(logfile, eb_tmpdir, testing, silent=True) sys.exit(0) # dry_run: print all easyconfigs and dependencies, and whether they are already built elif dry_run_mode: txt = dry_run(easyconfigs, modtool, short=not options.dry_run) print_msg(txt, log=_log, silent=testing, prefix=False) elif options.check_conflicts: if check_conflicts(easyconfigs, modtool): print_error("One or more conflicts detected!") sys.exit(1) else: print_msg("\nNo conflicts detected!\n", prefix=False) # dump source script to set up build environment elif options.dump_env_script: dump_env_script(easyconfigs) # cleanup and exit after dry run, searching easyconfigs or submitting regression test if any(no_ec_opts + [options.check_conflicts, dry_run_mode, options.dump_env_script]): cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # create dependency graph and exit if options.dep_graph: _log.info("Creating dependency graph %s" % options.dep_graph) dep_graph(options.dep_graph, ordered_ecs) cleanup(logfile, eb_tmpdir, testing, silent=True) sys.exit(0) # submit build as job(s), clean up and exit if options.job: submit_jobs(ordered_ecs, eb_go.generate_cmd_line(), testing=testing) if not testing: print_msg("Submitted parallel build jobs, exiting now") cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # build software, will exit when errors occurs (except when testing) exit_on_failure = not options.dump_test_report and not options.upload_test_report if not testing or (testing and do_build): ecs_with_res = build_and_install_software(ordered_ecs, init_session_state, exit_on_failure=exit_on_failure) else: ecs_with_res = [(ec, {}) for ec in ordered_ecs] correct_builds_cnt = len([ec_res for (_, ec_res) in ecs_with_res if ec_res.get('success', False)]) overall_success = correct_builds_cnt == len(ordered_ecs) success_msg = "Build succeeded for %s out of %s" % (correct_builds_cnt, len(ordered_ecs)) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # dump/upload overall test report test_report_msg = overall_test_report(ecs_with_res, len(paths), overall_success, success_msg, init_session_state) if test_report_msg is not None: print_msg(test_report_msg) print_msg(success_msg, log=_log, silent=testing) # cleanup and spec files for ec in easyconfigs: if 'original_spec' in ec and os.path.isfile(ec['spec']): os.remove(ec['spec']) # stop logging and cleanup tmp log file, unless one build failed (individual logs are located in eb_tmpdir) stop_logging(logfile, logtostdout=options.logtostdout) if overall_success: cleanup(logfile, eb_tmpdir, testing)
def test_legacy_env_vars(self): """Test legacy environment variables.""" # build path test_buildpath = os.path.join(self.tmpdir, 'build', 'path') os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) del os.environ['EASYBUILDBUILDPATH'] # source path config.variables = ConfigurationVariables() test_sourcepath = os.path.join(self.tmpdir, 'source', 'path') os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_path(), test_sourcepath) del os.environ['EASYBUILDSOURCEPATH'] # install path config.variables = ConfigurationVariables() test_installpath = os.path.join(self.tmpdir, 'install', 'path') os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual(source_path(), os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) del os.environ['EASYBUILDINSTALLPATH'] # prefix: should change build/install/source/repo paths config.variables = ConfigurationVariables() test_prefixpath = os.path.join(self.tmpdir, 'prefix', 'path') os.environ['EASYBUILDPREFIX'] = test_prefixpath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) # build/source/install path overrides prefix config.variables = ConfigurationVariables() os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) self.assertEqual(source_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) # also check old style vs new style self.assertEqual(config.variables['build_path'], config.variables['buildpath']) self.assertEqual(config.variables['install_path'], config.variables['installpath']) del os.environ['EASYBUILDBUILDPATH'] config.variables = ConfigurationVariables() os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_path(), test_sourcepath) self.assertEqual(install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDSOURCEPATH'] config.variables = ConfigurationVariables() os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual(build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual(install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual(install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual(repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDINSTALLPATH'] del os.environ['EASYBUILDPREFIX']
def main(args=None, logfile=None, do_build=None, testing=False, modtool=None): """ Main function: parse command line options, and act accordingly. :param args: command line arguments to use :param logfile: log file to use :param do_build: whether or not to actually perform the build :param testing: enable testing mode """ # purposely session state very early, to avoid modules loaded by EasyBuild meddling in init_session_state = session_state() eb_go, cfg_settings = set_up_configuration(args=args, logfile=logfile, testing=testing) options, orig_paths = eb_go.options, eb_go.args global _log (build_specs, _log, logfile, robot_path, search_query, eb_tmpdir, try_to_generate, tweaked_ecs_paths) = cfg_settings # load hook implementations (if any) hooks = load_hooks(options.hooks) run_hook(START, hooks) if modtool is None: modtool = modules_tool(testing=testing) # check whether any (EasyBuild-generated) modules are loaded already in the current session modtool.check_loaded_modules() if options.last_log: # print location to last log file, and exit last_log = find_last_log(logfile) or '(none)' print_msg(last_log, log=_log, prefix=False) # check whether packaging is supported when it's being used if options.package: check_pkg_support() else: _log.debug("Packaging not enabled, so not checking for packaging support.") # search for easyconfigs, if a query is specified if search_query: search_easyconfigs(search_query, short=options.search_short, filename_only=options.search_filename, terse=options.terse) # GitHub options that warrant a silent cleanup & exit if options.check_github: check_github() elif options.install_github_token: install_github_token(options.github_user, silent=build_option('silent')) elif options.close_pr: close_pr(options.close_pr, motivation_msg=options.close_pr_msg) elif options.list_prs: print(list_prs(options.list_prs)) elif options.merge_pr: merge_pr(options.merge_pr) elif options.review_pr: print(review_pr(pr=options.review_pr, colored=use_color(options.color))) elif options.list_installed_software: detailed = options.list_installed_software == 'detailed' print(list_software(output_format=options.output_format, detailed=detailed, only_installed=True)) elif options.list_software: print(list_software(output_format=options.output_format, detailed=options.list_software == 'detailed')) # non-verbose cleanup after handling GitHub integration stuff or printing terse info early_stop_options = [ options.check_github, options.install_github_token, options.list_installed_software, options.list_software, options.close_pr, options.list_prs, options.merge_pr, options.review_pr, options.terse, search_query, ] if any(early_stop_options): clean_exit(logfile, eb_tmpdir, testing, silent=True) # update session state eb_config = eb_go.generate_cmd_line(add_default=True) modlist = modtool.list() # build options must be initialized first before 'module list' works init_session_state.update({'easybuild_configuration': eb_config}) init_session_state.update({'module_list': modlist}) _log.debug("Initial session state: %s" % init_session_state) # determine easybuild-easyconfigs package install path easyconfigs_pkg_paths = get_paths_for(subdir=EASYCONFIGS_PKG_SUBDIR) if not easyconfigs_pkg_paths: _log.warning("Failed to determine install path for easybuild-easyconfigs package.") if options.install_latest_eb_release: if orig_paths: raise EasyBuildError("Installing the latest EasyBuild release can not be combined with installing " "other easyconfigs") else: eb_file = find_easybuild_easyconfig() orig_paths.append(eb_file) categorized_paths = categorize_files_by_type(orig_paths) # command line options that do not require any easyconfigs to be specified new_update_preview_pr = options.new_pr or options.update_pr or options.preview_pr no_ec_opts = [options.aggregate_regtest, options.regtest, search_query, new_update_preview_pr] # determine paths to easyconfigs determined_paths = det_easyconfig_paths(categorized_paths['easyconfigs']) if determined_paths: # transform paths into tuples, use 'False' to indicate the corresponding easyconfig files were not generated paths = [(p, False) for p in determined_paths] else: if 'name' in build_specs: # try to obtain or generate an easyconfig file via build specifications if a software name is provided paths = find_easyconfigs_by_specs(build_specs, robot_path, try_to_generate, testing=testing) elif any(no_ec_opts): paths = determined_paths else: print_error(("Please provide one or multiple easyconfig files, or use software build " "options to make EasyBuild search for easyconfigs"), log=_log, opt_parser=eb_go.parser, exit_on_error=not testing) _log.debug("Paths: %s" % paths) # run regtest if options.regtest or options.aggregate_regtest: _log.info("Running regression test") # fallback: easybuild-easyconfigs install path regtest_ok = regtest([path[0] for path in paths] or easyconfigs_pkg_paths, modtool) if not regtest_ok: _log.info("Regression test failed (partially)!") sys.exit(31) # exit -> 3x1t -> 31 # read easyconfig files easyconfigs, generated_ecs = parse_easyconfigs(paths, validate=not options.inject_checksums) # handle --check-contrib & --check-style options if run_contrib_style_checks([ec['ec'] for ec in easyconfigs], options.check_contrib, options.check_style): clean_exit(logfile, eb_tmpdir, testing) # verify easyconfig filenames, if desired if options.verify_easyconfig_filenames: _log.info("Verifying easyconfig filenames...") for easyconfig in easyconfigs: verify_easyconfig_filename(easyconfig['spec'], easyconfig['ec'], parsed_ec=easyconfig['ec']) # tweak obtained easyconfig files, if requested # don't try and tweak anything if easyconfigs were generated, since building a full dep graph will fail # if easyconfig files for the dependencies are not available if try_to_generate and build_specs and not generated_ecs: easyconfigs = tweak(easyconfigs, build_specs, modtool, targetdirs=tweaked_ecs_paths) if options.containerize: # if --containerize/-C create a container recipe (and optionally container image), and stop containerize(easyconfigs) clean_exit(logfile, eb_tmpdir, testing) forced = options.force or options.rebuild dry_run_mode = options.dry_run or options.dry_run_short # skip modules that are already installed unless forced, or unless an option is used that warrants not skipping if not (forced or dry_run_mode or options.extended_dry_run or new_update_preview_pr or options.inject_checksums): retained_ecs = skip_available(easyconfigs, modtool) if not testing: for skipped_ec in [ec for ec in easyconfigs if ec not in retained_ecs]: print_msg("%s is already installed (module found), skipping" % skipped_ec['full_mod_name']) easyconfigs = retained_ecs # determine an order that will allow all specs in the set to build if len(easyconfigs) > 0: # resolve dependencies if robot is enabled, except in dry run mode # one exception: deps *are* resolved with --new-pr or --update-pr when dry run mode is enabled if options.robot and (not dry_run_mode or new_update_preview_pr): print_msg("resolving dependencies ...", log=_log, silent=testing) ordered_ecs = resolve_dependencies(easyconfigs, modtool) else: ordered_ecs = easyconfigs elif new_update_preview_pr: ordered_ecs = None else: print_msg("No easyconfigs left to be built.", log=_log, silent=testing) ordered_ecs = [] # creating/updating PRs if new_update_preview_pr: if options.new_pr: new_pr(categorized_paths, ordered_ecs, title=options.pr_title, descr=options.pr_descr, commit_msg=options.pr_commit_msg) elif options.preview_pr: print(review_pr(paths=determined_paths, colored=use_color(options.color))) else: update_pr(options.update_pr, categorized_paths, ordered_ecs, commit_msg=options.pr_commit_msg) # dry_run: print all easyconfigs and dependencies, and whether they are already built elif dry_run_mode: txt = dry_run(easyconfigs, modtool, short=not options.dry_run) print_msg(txt, log=_log, silent=testing, prefix=False) elif options.check_conflicts: if check_conflicts(easyconfigs, modtool): print_error("One or more conflicts detected!") sys.exit(1) else: print_msg("\nNo conflicts detected!\n", prefix=False) # dump source script to set up build environment elif options.dump_env_script: dump_env_script(easyconfigs) elif options.inject_checksums: inject_checksums(ordered_ecs, options.inject_checksums) # cleanup and exit after dry run, searching easyconfigs or submitting regression test stop_options = [options.check_conflicts, dry_run_mode, options.dump_env_script, options.inject_checksums] if any(no_ec_opts) or any(stop_options): clean_exit(logfile, eb_tmpdir, testing) # create dependency graph and exit if options.dep_graph: _log.info("Creating dependency graph %s" % options.dep_graph) dep_graph(options.dep_graph, ordered_ecs) clean_exit(logfile, eb_tmpdir, testing, silent=True) # submit build as job(s), clean up and exit if options.job: submit_jobs(ordered_ecs, eb_go.generate_cmd_line(), testing=testing) if not testing: print_msg("Submitted parallel build jobs, exiting now") clean_exit(logfile, eb_tmpdir, testing) # build software, will exit when errors occurs (except when testing) if not testing or (testing and do_build): exit_on_failure = not (options.dump_test_report or options.upload_test_report) ecs_with_res = build_and_install_software(ordered_ecs, init_session_state, exit_on_failure=exit_on_failure) else: ecs_with_res = [(ec, {}) for ec in ordered_ecs] correct_builds_cnt = len([ec_res for (_, ec_res) in ecs_with_res if ec_res.get('success', False)]) overall_success = correct_builds_cnt == len(ordered_ecs) success_msg = "Build succeeded for %s out of %s" % (correct_builds_cnt, len(ordered_ecs)) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # dump/upload overall test report test_report_msg = overall_test_report(ecs_with_res, len(paths), overall_success, success_msg, init_session_state) if test_report_msg is not None: print_msg(test_report_msg) print_msg(success_msg, log=_log, silent=testing) # cleanup and spec files for ec in easyconfigs: if 'original_spec' in ec and os.path.isfile(ec['spec']): os.remove(ec['spec']) run_hook(END, hooks) # stop logging and cleanup tmp log file, unless one build failed (individual logs are located in eb_tmpdir) stop_logging(logfile, logtostdout=options.logtostdout) if overall_success: cleanup(logfile, eb_tmpdir, testing)
def test_legacy_env_vars(self): """Test legacy environment variables.""" self.purge_environment() # build path test_buildpath = os.path.join(self.tmpdir, 'build', 'path') os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) del os.environ['EASYBUILDBUILDPATH'] # source path(s) test_sourcepaths = [ os.path.join(self.tmpdir, 'source', 'path'), ':'.join([ os.path.join(self.tmpdir, 'source', 'path1'), os.path.join(self.tmpdir, 'source', 'path2'), ]), ':'.join([ os.path.join(self.tmpdir, 'source', 'path1'), os.path.join(self.tmpdir, 'source', 'path2'), os.path.join(self.tmpdir, 'source', 'path3'), ]), ] for test_sourcepath in test_sourcepaths: init_config() os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_paths(), test_sourcepath.split(':')) del os.environ['EASYBUILDSOURCEPATH'] test_sourcepath = os.path.join(self.tmpdir, 'source', 'path') # install path init_config() test_installpath = os.path.join(self.tmpdir, 'install', 'path') os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual( source_paths()[0], os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) del os.environ['EASYBUILDINSTALLPATH'] # prefix: should change build/install/source/repo paths init_config() test_prefixpath = os.path.join(self.tmpdir, 'prefix', 'path') os.environ['EASYBUILDPREFIX'] = test_prefixpath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual( source_paths()[0], os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) # build/source/install path overrides prefix init_config() os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) self.assertEqual( source_paths()[0], os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDBUILDPATH'] init_config() os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_paths()[0], test_sourcepath) self.assertEqual( install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDSOURCEPATH'] init_config() os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual( source_paths()[0], os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = init_repository(get_repository(), get_repositorypath()) self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath']))
def test_legacy_env_vars(self): """Test legacy environment variables.""" # build path test_buildpath = os.path.join(self.tmpdir, 'build', 'path') os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) del os.environ['EASYBUILDBUILDPATH'] # source path config.variables = ConfigurationVariables() test_sourcepath = os.path.join(self.tmpdir, 'source', 'path') os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_path(), test_sourcepath) del os.environ['EASYBUILDSOURCEPATH'] # install path config.variables = ConfigurationVariables() test_installpath = os.path.join(self.tmpdir, 'install', 'path') os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual( source_path(), os.path.join(os.path.expanduser('~'), '.local', 'easybuild', DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) del os.environ['EASYBUILDINSTALLPATH'] # prefix: should change build/install/source/repo paths config.variables = ConfigurationVariables() test_prefixpath = os.path.join(self.tmpdir, 'prefix', 'path') os.environ['EASYBUILDPREFIX'] = test_prefixpath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual( source_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) # build/source/install path overrides prefix config.variables = ConfigurationVariables() os.environ['EASYBUILDBUILDPATH'] = test_buildpath self.configure(args=[]) self.assertEqual(build_path(), test_buildpath) self.assertEqual( source_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) # also check old style vs new style self.assertEqual(config.variables['build_path'], config.variables['buildpath']) self.assertEqual(config.variables['install_path'], config.variables['installpath']) del os.environ['EASYBUILDBUILDPATH'] config.variables = ConfigurationVariables() os.environ['EASYBUILDSOURCEPATH'] = test_sourcepath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual(source_path(), test_sourcepath) self.assertEqual( install_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDSOURCEPATH'] config.variables = ConfigurationVariables() os.environ['EASYBUILDINSTALLPATH'] = test_installpath self.configure(args=[]) self.assertEqual( build_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['buildpath'])) self.assertEqual( source_path(), os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['sourcepath'])) self.assertEqual( install_path(), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_software'])) self.assertEqual( install_path(typ='mod'), os.path.join(test_installpath, DEFAULT_PATH_SUBDIRS['subdir_modules'])) repo = get_repository() self.assertTrue(isinstance(repo, FileRepository)) self.assertEqual( repo.repo, os.path.join(test_prefixpath, DEFAULT_PATH_SUBDIRS['repositorypath'])) del os.environ['EASYBUILDINSTALLPATH'] del os.environ['EASYBUILDPREFIX']
sys.exit(0) # build software, will exit when errors occurs (except when regtesting) correct_built_cnt = 0 all_built_cnt = 0 if not testing: for spec in orderedSpecs: (success, _) = build_and_install_software(spec, options, origEnviron, silent=testing) if success: correct_built_cnt += 1 all_built_cnt += 1 print_msg("Build succeeded for %s out of %s" % (correct_built_cnt, all_built_cnt), log=_log, silent=testing) get_repository().cleanup() # cleanup and spec files for ec in easyconfigs: if 'originalSpec' in ec and os.path.isfile(ec['spec']): os.remove(ec['spec']) # cleanup tmp log file (all is well, all modules have their own log file) if options.logtostdout: fancylogger.logToScreen(enable=False, stdout=True) else: fancylogger.logToFile(logfile, enable=False) cleanup_logfile_and_exit(logfile, testing, False) logfile = None return logfile
# build software, will exit when errors occurs (except when testing) exit_on_failure = not options.dump_test_report and not options.upload_test_report if not testing or (testing and do_build): ecs_with_res = build_and_install_software( ordered_ecs, init_session_state, exit_on_failure=exit_on_failure) else: ecs_with_res = [(ec, {}) for ec in ordered_ecs] correct_builds_cnt = len([ ec_res for (_, ec_res) in ecs_with_res if ec_res.get('success', False) ]) overall_success = correct_builds_cnt == len(ordered_ecs) success_msg = "Build succeeded for %s out of %s" % (correct_builds_cnt, len(ordered_ecs)) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # report back in PR in case of testing if options.upload_test_report: msg = success_msg + " (%d easyconfigs in this PR)" % len(paths) test_report = create_test_report(msg, ecs_with_res, init_session_state, pr_nr=options.from_pr, gist_log=True) if options.from_pr: # upload test report to gist and issue a comment in the PR to notify msg = post_easyconfigs_pr_test_report(options.from_pr, test_report, success_msg, init_session_state,
def main(testing_data=(None, None, None)): """ Main function: parse command line options, and act accordingly. @param testing_data: tuple with command line arguments, log file and boolean indicating whether or not to build """ # purposely session state very early, to avoid modules loaded by EasyBuild meddling in init_session_state = session_state() # steer behavior when testing main testing = testing_data[0] is not None args, logfile, do_build = testing_data # initialise options eb_go = eboptions.parse_options(args=args) options = eb_go.options orig_paths = eb_go.args # set umask (as early as possible) if options.umask is not None: new_umask = int(options.umask, 8) old_umask = os.umask(new_umask) # set temporary directory to use eb_tmpdir = set_tmpdir(options.tmpdir) # initialise logging for main global _log _log, logfile = init_logging(logfile, logtostdout=options.logtostdout, testing=testing) # disallow running EasyBuild as root if os.getuid() == 0: raise EasyBuildError( "You seem to be running EasyBuild with root privileges which is not wise, " "so let's end this here.") # log startup info eb_cmd_line = eb_go.generate_cmd_line() + eb_go.args log_start(eb_cmd_line, eb_tmpdir) if options.umask is not None: _log.info("umask set to '%s' (used to be '%s')" % (oct(new_umask), oct(old_umask))) # process software build specifications (if any), i.e. # software name/version, toolchain name/version, extra patches, ... (try_to_generate, build_specs) = process_software_build_specs(options) # determine robot path # --try-X, --dep-graph, --search use robot path for searching, so enable it with path of installed easyconfigs tweaked_ecs = try_to_generate and build_specs tweaked_ecs_path, pr_path = alt_easyconfig_paths(eb_tmpdir, tweaked_ecs=tweaked_ecs, from_pr=options.from_pr) auto_robot = try_to_generate or options.dep_graph or options.search or options.search_short robot_path = det_robot_path(options.robot_paths, tweaked_ecs_path, pr_path, auto_robot=auto_robot) _log.debug("Full robot path: %s" % robot_path) # configure & initialize build options config_options_dict = eb_go.get_options_by_section('config') build_options = { 'build_specs': build_specs, 'command_line': eb_cmd_line, 'pr_path': pr_path, 'robot_path': robot_path, 'silent': testing, 'try_to_generate': try_to_generate, 'valid_stops': [x[0] for x in EasyBlock.get_steps()], } # initialise the EasyBuild configuration & build options config.init(options, config_options_dict) config.init_build_options(build_options=build_options, cmdline_options=options) # update session state eb_config = eb_go.generate_cmd_line(add_default=True) modlist = session_module_list( testing=testing ) # build options must be initialized first before 'module list' works init_session_state.update({'easybuild_configuration': eb_config}) init_session_state.update({'module_list': modlist}) _log.debug("Initial session state: %s" % init_session_state) # search for easyconfigs, if a query is specified query = options.search or options.search_short if query: search_easyconfigs(query, short=not options.search) # determine easybuild-easyconfigs package install path easyconfigs_pkg_paths = get_paths_for(subdir=EASYCONFIGS_PKG_SUBDIR) if not easyconfigs_pkg_paths: _log.warning( "Failed to determine install path for easybuild-easyconfigs package." ) # determine paths to easyconfigs paths = det_easyconfig_paths(orig_paths) if paths: # transform paths into tuples, use 'False' to indicate the corresponding easyconfig files were not generated paths = [(p, False) for p in paths] else: if 'name' in build_specs: # try to obtain or generate an easyconfig file via build specifications if a software name is provided paths = find_easyconfigs_by_specs(build_specs, robot_path, try_to_generate, testing=testing) elif not any([ options.aggregate_regtest, options.search, options.search_short, options.regtest ]): print_error(( "Please provide one or multiple easyconfig files, or use software build " "options to make EasyBuild search for easyconfigs"), log=_log, opt_parser=eb_go.parser, exit_on_error=not testing) _log.debug("Paths: %s" % paths) # run regtest if options.regtest or options.aggregate_regtest: _log.info("Running regression test") # fallback: easybuild-easyconfigs install path regtest_ok = regtest([path[0] for path in paths] or easyconfigs_pkg_paths) if not regtest_ok: _log.info("Regression test failed (partially)!") sys.exit(31) # exit -> 3x1t -> 31 # read easyconfig files easyconfigs, generated_ecs = parse_easyconfigs(paths) # tweak obtained easyconfig files, if requested # don't try and tweak anything if easyconfigs were generated, since building a full dep graph will fail # if easyconfig files for the dependencies are not available if try_to_generate and build_specs and not generated_ecs: easyconfigs = tweak(easyconfigs, build_specs, targetdir=tweaked_ecs_path) # dry_run: print all easyconfigs and dependencies, and whether they are already built if options.dry_run or options.dry_run_short: txt = dry_run(easyconfigs, short=not options.dry_run, build_specs=build_specs) print_msg(txt, log=_log, silent=testing, prefix=False) # cleanup and exit after dry run, searching easyconfigs or submitting regression test if any([ options.dry_run, options.dry_run_short, options.regtest, options.search, options.search_short ]): cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # skip modules that are already installed unless forced if not options.force: retained_ecs = skip_available(easyconfigs) if not testing: for skipped_ec in [ ec for ec in easyconfigs if ec not in retained_ecs ]: print_msg("%s is already installed (module found), skipping" % skipped_ec['full_mod_name']) easyconfigs = retained_ecs # determine an order that will allow all specs in the set to build if len(easyconfigs) > 0: if options.robot: print_msg("resolving dependencies ...", log=_log, silent=testing) ordered_ecs = resolve_dependencies(easyconfigs, build_specs=build_specs) else: ordered_ecs = easyconfigs else: print_msg("No easyconfigs left to be built.", log=_log, silent=testing) ordered_ecs = [] # create dependency graph and exit if options.dep_graph: _log.info("Creating dependency graph %s" % options.dep_graph) dep_graph(options.dep_graph, ordered_ecs) sys.exit(0) # submit build as job(s), clean up and exit if options.job: job_info_txt = submit_jobs(ordered_ecs, eb_go.generate_cmd_line(), testing=testing) if not testing: print_msg("Submitted parallel build jobs, exiting now: %s" % job_info_txt) cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # build software, will exit when errors occurs (except when testing) exit_on_failure = not options.dump_test_report and not options.upload_test_report if not testing or (testing and do_build): ecs_with_res = build_and_install_software( ordered_ecs, init_session_state, exit_on_failure=exit_on_failure) else: ecs_with_res = [(ec, {}) for ec in ordered_ecs] correct_builds_cnt = len([ ec_res for (_, ec_res) in ecs_with_res if ec_res.get('success', False) ]) overall_success = correct_builds_cnt == len(ordered_ecs) success_msg = "Build succeeded for %s out of %s" % (correct_builds_cnt, len(ordered_ecs)) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # dump/upload overall test report test_report_msg = overall_test_report(ecs_with_res, len(paths), overall_success, success_msg, init_session_state) if test_report_msg is not None: print_msg(test_report_msg) print_msg(success_msg, log=_log, silent=testing) # cleanup and spec files for ec in easyconfigs: if 'original_spec' in ec and os.path.isfile(ec['spec']): os.remove(ec['spec']) # stop logging and cleanup tmp log file, unless one build failed (individual logs are located in eb_tmpdir path) stop_logging(logfile, logtostdout=options.logtostdout) if overall_success: cleanup(logfile, eb_tmpdir, testing)
def main(args=None, logfile=None, do_build=None, testing=False, modtool=None): """ Main function: parse command line options, and act accordingly. :param args: command line arguments to use :param logfile: log file to use :param do_build: whether or not to actually perform the build :param testing: enable testing mode """ # purposely session state very early, to avoid modules loaded by EasyBuild meddling in init_session_state = session_state() # initialise options eb_go = eboptions.parse_options(args=args) options = eb_go.options orig_paths = eb_go.args # set umask (as early as possible) if options.umask is not None: new_umask = int(options.umask, 8) old_umask = os.umask(new_umask) # set by option parsers via set_tmpdir eb_tmpdir = tempfile.gettempdir() search_query = options.search or options.search_filename or options.search_short # initialise logging for main global _log _log, logfile = init_logging(logfile, logtostdout=options.logtostdout, silent=(testing or options.terse or search_query), colorize=options.color) # disallow running EasyBuild as root (by default) check_root_usage( allow_use_as_root=options.allow_use_as_root_and_accept_consequences) # log startup info eb_cmd_line = eb_go.generate_cmd_line() + eb_go.args log_start(eb_cmd_line, eb_tmpdir) if options.umask is not None: _log.info("umask set to '%s' (used to be '%s')" % (oct(new_umask), oct(old_umask))) # process software build specifications (if any), i.e. # software name/version, toolchain name/version, extra patches, ... (try_to_generate, build_specs) = process_software_build_specs(options) # determine robot path # --try-X, --dep-graph, --search use robot path for searching, so enable it with path of installed easyconfigs tweaked_ecs = try_to_generate and build_specs tweaked_ecs_paths, pr_path = alt_easyconfig_paths(eb_tmpdir, tweaked_ecs=tweaked_ecs, from_pr=options.from_pr) auto_robot = try_to_generate or options.check_conflicts or options.dep_graph or search_query robot_path = det_robot_path(options.robot_paths, tweaked_ecs_paths, pr_path, auto_robot=auto_robot) _log.debug("Full robot path: %s" % robot_path) # configure & initialize build options config_options_dict = eb_go.get_options_by_section('config') build_options = { 'build_specs': build_specs, 'command_line': eb_cmd_line, 'external_modules_metadata': parse_external_modules_metadata(options.external_modules_metadata), 'pr_path': pr_path, 'robot_path': robot_path, 'silent': testing, 'try_to_generate': try_to_generate, 'valid_stops': [x[0] for x in EasyBlock.get_steps()], } # initialise the EasyBuild configuration & build options config.init(options, config_options_dict) config.init_build_options(build_options=build_options, cmdline_options=options) if modtool is None: modtool = modules_tool(testing=testing) # check whether any (EasyBuild-generated) modules are loaded already in the current session modtool.check_loaded_modules() if options.last_log: # print location to last log file, and exit last_log = find_last_log(logfile) or '(none)' print_msg(last_log, log=_log, prefix=False) # check whether packaging is supported when it's being used if options.package: check_pkg_support() else: _log.debug( "Packaging not enabled, so not checking for packaging support.") # search for easyconfigs, if a query is specified if search_query: search_easyconfigs(search_query, short=options.search_short, filename_only=options.search_filename, terse=options.terse) # GitHub options that warrant a silent cleanup & exit if options.check_github: check_github() elif options.install_github_token: install_github_token(options.github_user, silent=build_option('silent')) elif options.merge_pr: merge_pr(options.merge_pr) elif options.review_pr: print review_pr(pr=options.review_pr, colored=use_color(options.color)) elif options.list_installed_software: detailed = options.list_installed_software == 'detailed' print list_software(output_format=options.output_format, detailed=detailed, only_installed=True) elif options.list_software: print list_software(output_format=options.output_format, detailed=options.list_software == 'detailed') # non-verbose cleanup after handling GitHub integration stuff or printing terse info early_stop_options = [ options.check_github, options.install_github_token, options.list_installed_software, options.list_software, options.merge_pr, options.review_pr, options.terse, search_query, ] if any(early_stop_options): cleanup(logfile, eb_tmpdir, testing, silent=True) sys.exit(0) # update session state eb_config = eb_go.generate_cmd_line(add_default=True) modlist = modtool.list( ) # build options must be initialized first before 'module list' works init_session_state.update({'easybuild_configuration': eb_config}) init_session_state.update({'module_list': modlist}) _log.debug("Initial session state: %s" % init_session_state) # determine easybuild-easyconfigs package install path easyconfigs_pkg_paths = get_paths_for(subdir=EASYCONFIGS_PKG_SUBDIR) if not easyconfigs_pkg_paths: _log.warning( "Failed to determine install path for easybuild-easyconfigs package." ) if options.install_latest_eb_release: if orig_paths: raise EasyBuildError( "Installing the latest EasyBuild release can not be combined with installing " "other easyconfigs") else: eb_file = find_easybuild_easyconfig() orig_paths.append(eb_file) categorized_paths = categorize_files_by_type(orig_paths) # command line options that do not require any easyconfigs to be specified new_update_preview_pr = options.new_pr or options.update_pr or options.preview_pr no_ec_opts = [ options.aggregate_regtest, options.regtest, search_query, new_update_preview_pr ] # determine paths to easyconfigs determined_paths = det_easyconfig_paths(categorized_paths['easyconfigs']) if determined_paths: # transform paths into tuples, use 'False' to indicate the corresponding easyconfig files were not generated paths = [(p, False) for p in determined_paths] else: if 'name' in build_specs: # try to obtain or generate an easyconfig file via build specifications if a software name is provided paths = find_easyconfigs_by_specs(build_specs, robot_path, try_to_generate, testing=testing) elif any(no_ec_opts): paths = determined_paths else: print_error(( "Please provide one or multiple easyconfig files, or use software build " "options to make EasyBuild search for easyconfigs"), log=_log, opt_parser=eb_go.parser, exit_on_error=not testing) _log.debug("Paths: %s" % paths) # run regtest if options.regtest or options.aggregate_regtest: _log.info("Running regression test") # fallback: easybuild-easyconfigs install path regtest_ok = regtest([path[0] for path in paths] or easyconfigs_pkg_paths, modtool) if not regtest_ok: _log.info("Regression test failed (partially)!") sys.exit(31) # exit -> 3x1t -> 31 if options.check_style: _log.debug("Running style check...") if cmdline_easyconfigs_style_check([path[0] for path in paths]): print_msg("All style checks passed!", prefix=False) cleanup(logfile, eb_tmpdir, testing) sys.exit(0) else: raise EasyBuildError("One or more style checks FAILED!") # read easyconfig files easyconfigs, generated_ecs = parse_easyconfigs( paths, validate=not options.inject_checksums) # verify easyconfig filenames, if desired if options.verify_easyconfig_filenames: _log.info("Verifying easyconfig filenames...") for easyconfig in easyconfigs: verify_easyconfig_filename(easyconfig['spec'], easyconfig['ec'], parsed_ec=easyconfig['ec']) # tweak obtained easyconfig files, if requested # don't try and tweak anything if easyconfigs were generated, since building a full dep graph will fail # if easyconfig files for the dependencies are not available if try_to_generate and build_specs and not generated_ecs: easyconfigs = tweak(easyconfigs, build_specs, modtool, targetdirs=tweaked_ecs_paths) if options.containerize: containerize(easyconfigs) cleanup(logfile, eb_tmpdir, testing) sys.exit(0) forced = options.force or options.rebuild dry_run_mode = options.dry_run or options.dry_run_short # skip modules that are already installed unless forced, or unless an option is used that warrants not skipping if not (forced or dry_run_mode or options.extended_dry_run or new_update_preview_pr or options.inject_checksums): retained_ecs = skip_available(easyconfigs, modtool) if not testing: for skipped_ec in [ ec for ec in easyconfigs if ec not in retained_ecs ]: print_msg("%s is already installed (module found), skipping" % skipped_ec['full_mod_name']) easyconfigs = retained_ecs # determine an order that will allow all specs in the set to build if len(easyconfigs) > 0: # resolve dependencies if robot is enabled, except in dry run mode # one exception: deps *are* resolved with --new-pr or --update-pr when dry run mode is enabled if options.robot and (not dry_run_mode or new_update_preview_pr): print_msg("resolving dependencies ...", log=_log, silent=testing) ordered_ecs = resolve_dependencies(easyconfigs, modtool) else: ordered_ecs = easyconfigs elif new_update_preview_pr: ordered_ecs = None else: print_msg("No easyconfigs left to be built.", log=_log, silent=testing) ordered_ecs = [] # creating/updating PRs if new_update_preview_pr: if options.new_pr: new_pr(categorized_paths, ordered_ecs, title=options.pr_title, descr=options.pr_descr, commit_msg=options.pr_commit_msg) elif options.preview_pr: print review_pr(paths=determined_paths, colored=use_color(options.color)) else: update_pr(options.update_pr, categorized_paths, ordered_ecs, commit_msg=options.pr_commit_msg) # dry_run: print all easyconfigs and dependencies, and whether they are already built elif dry_run_mode: txt = dry_run(easyconfigs, modtool, short=not options.dry_run) print_msg(txt, log=_log, silent=testing, prefix=False) elif options.check_conflicts: if check_conflicts(easyconfigs, modtool): print_error("One or more conflicts detected!") sys.exit(1) else: print_msg("\nNo conflicts detected!\n", prefix=False) # dump source script to set up build environment elif options.dump_env_script: dump_env_script(easyconfigs) elif options.inject_checksums: inject_checksums(ordered_ecs, options.inject_checksums) # cleanup and exit after dry run, searching easyconfigs or submitting regression test stop_options = [ options.check_conflicts, dry_run_mode, options.dump_env_script, options.inject_checksums ] if any(no_ec_opts) or any(stop_options): cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # create dependency graph and exit if options.dep_graph: _log.info("Creating dependency graph %s" % options.dep_graph) dep_graph(options.dep_graph, ordered_ecs) cleanup(logfile, eb_tmpdir, testing, silent=True) sys.exit(0) # submit build as job(s), clean up and exit if options.job: submit_jobs(ordered_ecs, eb_go.generate_cmd_line(), testing=testing) if not testing: print_msg("Submitted parallel build jobs, exiting now") cleanup(logfile, eb_tmpdir, testing) sys.exit(0) # build software, will exit when errors occurs (except when testing) if not testing or (testing and do_build): exit_on_failure = not (options.dump_test_report or options.upload_test_report) hooks = load_hooks(options.hooks) ecs_with_res = build_and_install_software( ordered_ecs, init_session_state, exit_on_failure=exit_on_failure, hooks=hooks) else: ecs_with_res = [(ec, {}) for ec in ordered_ecs] correct_builds_cnt = len([ ec_res for (_, ec_res) in ecs_with_res if ec_res.get('success', False) ]) overall_success = correct_builds_cnt == len(ordered_ecs) success_msg = "Build succeeded for %s out of %s" % (correct_builds_cnt, len(ordered_ecs)) repo = init_repository(get_repository(), get_repositorypath()) repo.cleanup() # dump/upload overall test report test_report_msg = overall_test_report(ecs_with_res, len(paths), overall_success, success_msg, init_session_state) if test_report_msg is not None: print_msg(test_report_msg) print_msg(success_msg, log=_log, silent=testing) # cleanup and spec files for ec in easyconfigs: if 'original_spec' in ec and os.path.isfile(ec['spec']): os.remove(ec['spec']) # stop logging and cleanup tmp log file, unless one build failed (individual logs are located in eb_tmpdir) stop_logging(logfile, logtostdout=options.logtostdout) if overall_success: cleanup(logfile, eb_tmpdir, testing)