def test_schedule_bad_crf_model(self):
site_visit_schedules._registry = {}
visit_schedule = VisitSchedule(
name="visit_schedule",
verbose_name="Visit Schedule",
offstudy_model="visit_schedule_app.subjectoffstudy",
death_report_model="visit_schedule_app.deathreport",
)
schedule = Schedule(
name="schedule",
onschedule_model="visit_schedule_app.onschedule",
offschedule_model="visit_schedule_app.offschedule",
appointment_model="edc_appointment.appointment",
consent_model="visit_schedule_app.subjectconsent",
)
crfs = FormsCollection(
Crf(show_order=10, model="blah.CrfOne"),
Crf(show_order=20, model="blah.CrfTwo"),
Crf(show_order=30, model="blah.CrfThree"),
)
visit = Visit(
code="1000",
rbase=relativedelta(days=0),
rlower=relativedelta(days=0),
rupper=relativedelta(days=6),
facility_name="default",
crfs=crfs,
timepoint=1,
)
schedule.add_visit(visit)
visit_schedule.add_schedule(schedule)
site_visit_schedules.register(visit_schedule)
errors = visit_schedule_check(app_configs=django_apps.get_app_configs())
self.assertEqual(len(errors), 1)
self.assertEqual("edc_visit_schedule.visits", errors[0].id)
def test_forms_collection_excludes_by_site_id3(self):
crfs = []
for i in range(0, 5):
crfs.append(Crf(show_order=i, model=f"x.{i}"))
for i in range(6, 11):
crfs.append(Crf(show_order=i, model=f"x.{i}"))
forms = FormsCollection(*crfs)
self.assertEqual(len(forms.forms), 10)
def test_forms_collection_order(self):
crfs = []
for i in range(0, 10):
crfs.append(Crf(show_order=i, model="x.x"))
try:
FormsCollection(*crfs)
except FormsCollectionError as e:
self.fail(f"FormsCollectionError unexpectedly raised. Got {e}")
crfs.append(Crf(show_order=0, model="x.x"))
self.assertRaises(FormsCollectionError, FormsCollection, *crfs)
from edc_visit_schedule.schedule import Schedule
from edc_visit_schedule.visit import FormsCollection, Crf, Visit
from edc_visit_schedule.visit_schedule import VisitSchedule
from dateutil.relativedelta import relativedelta
crfs = FormsCollection(
Crf(show_order=1, model=f'edc_reference.crfone', required=True), )
visit0 = Visit(code='1000',
title='Day 1',
timepoint=0,
rbase=relativedelta(days=0),
rlower=relativedelta(days=0),
rupper=relativedelta(days=6),
crfs=crfs,
facility_name='default')
schedule = Schedule(name='schedule',
onschedule_model='edc_reference.onschedule',
offschedule_model='edc_reference.offschedule',
appointment_model='edc_appointment.appointment',
consent_model='edc_reference.subjectconsent')
schedule.add_visit(visit0)
visit_schedule = VisitSchedule(name='visit_schedule',
offstudy_model='edc_reference.subjectoffstudy',
death_report_model='edc_reference.deathreport')
visit_schedule.add_schedule(schedule)
def test_forms_collection_empty(self):
crfs = []
try:
FormsCollection(*crfs)
except FormsCollectionError as e:
self.fail(f"FormsCollectionError unexpectedly raised. Got {e}")
def test_forms_collection_none1(self):
crfs = None
try:
FormsCollection(crfs)
except FormsCollectionError as e:
self.fail(f"FormsCollectionError unexpectedly raised. Got {e}")
from edc_visit_schedule.visit import Crf, FormsCollection
app_label = 'bcpp_clinic_subject'
crfs = FormsCollection(
Crf(show_order=1, model=f'{app_label}.questionnaire'),
Crf(show_order=2, model=f'{app_label}.viralloadtracking'),
Crf(show_order=3, model=f'{app_label}.vlresult'))
from dateutil.relativedelta import relativedelta
from edc_visit_schedule.schedule import Schedule
from edc_visit_schedule.visit import Crf, FormsCollection, Visit
from edc_visit_schedule.visit_schedule import VisitSchedule
crfs = FormsCollection(Crf(show_order=1, model=f"visit_schedule_app.crfone", required=True))
visit0 = Visit(
code="1000",
title="Day 1",
timepoint=0,
rbase=relativedelta(days=0),
rlower=relativedelta(days=0),
rupper=relativedelta(days=6),
crfs=crfs,
)
visit1 = Visit(
code="2000",
title="Day 2",
timepoint=1,
rbase=relativedelta(days=1),
rlower=relativedelta(days=0),
rupper=relativedelta(days=6),
crfs=crfs,
)
visit2 = Visit(
code="3000",
title="Day 3",
from dateutil.relativedelta import relativedelta
from edc_visit_schedule.schedule import Schedule
from edc_visit_schedule.visit import Crf, FormsCollection, Visit
from edc_visit_schedule.visit_schedule import VisitSchedule
crfs = FormsCollection(Crf(show_order=1, model=f"edc_crf.crf", required=True))
visit0 = Visit(
code="1000",
title="Day 1",
timepoint=0,
rbase=relativedelta(days=0),
rlower=relativedelta(days=0),
rupper=relativedelta(days=6),
crfs=crfs,
)
visit1 = Visit(
code="2000",
title="Day 2",
timepoint=1,
rbase=relativedelta(days=1),
rlower=relativedelta(days=0),
rupper=relativedelta(days=6),
crfs=crfs,
)
visit2 = Visit(
code="3000",
title="Day 3",
timepoint=2,
from dateutil.relativedelta import relativedelta
from edc_visit_schedule.schedule import Schedule
from edc_visit_schedule.site_visit_schedules import site_visit_schedules
from edc_visit_schedule.visit import Crf, FormsCollection, Visit
from edc_visit_schedule.visit_schedule import VisitSchedule
crfs = FormsCollection(
Crf(show_order=1, model=f"reference_app.crfone", required=True))
visit0 = Visit(
code="1000",
title="Day 1",
timepoint=0,
rbase=relativedelta(days=0),
rlower=relativedelta(days=0),
rupper=relativedelta(days=6),
crfs=crfs,
facility_name="default",
)
visit1 = Visit(
code="2000",
title="Day 2",
timepoint=1,
rbase=relativedelta(days=7),
rlower=relativedelta(days=6),
rupper=relativedelta(days=6),
crfs=crfs,
facility_name="default",
)
from edc_visit_schedule.visit import Requisition, FormsCollection, Panel
RESEARCH_BLOOD_DRAW = 'Research Blood Draw'
VIRAL_LOAD = 'Viral Load'
rdb_panel = Panel(name=RESEARCH_BLOOD_DRAW)
viral_load_panel = Panel(name=VIRAL_LOAD)
app_label = 'bcpp_clinic_subject'
requisitions = FormsCollection(
Requisition(
show_order=10, model=f'{app_label}.subjectrequisition',
panel=rdb_panel, required=True, additional=False),
Requisition(
show_order=20, model=f'{app_label}.subjectrequisition',
panel=viral_load_panel, additional=False),
)
crfs_bhs = FormsCollection(
Crf(show_order=20, model=f'{app_label}.residencymobility', required=True),
Crf(show_order=30, model=f'{app_label}.communityengagement',
required=True),
Crf(show_order=40, model=f'{app_label}.demographics', required=True),
Crf(show_order=50, model=f'{app_label}.education', required=True),
Crf(show_order=60, model=f'{app_label}.hivtestinghistory', required=True),
Crf(show_order=70, model=f'{app_label}.hivtestreview', required=True),
Crf(show_order=80,
model=f'{app_label}.hivresultdocumentation',
required=True),
Crf(show_order=90, model=f'{app_label}.hivtested', required=True),
Crf(show_order=100, model=f'{app_label}.hivuntested', required=True),
Crf(show_order=110, model=f'{app_label}.hivcareadherence', required=True),
Crf(show_order=120, model=f'{app_label}.sexualbehaviour', required=True),
Crf(show_order=130, model=f'{app_label}.recentpartner', required=True),
Crf(show_order=140, model=f'{app_label}.secondpartner', required=True),
Crf(show_order=150, model=f'{app_label}.thirdpartner', required=True),
Crf(show_order=170, model=f'{app_label}.hivmedicalcare', required=True),
Crf(show_order=180, model=f'{app_label}.circumcision', required=True),
Crf(show_order=190, model=f'{app_label}.circumcised', required=True),
Crf(show_order=200, model=f'{app_label}.uncircumcised', required=True),
Crf(show_order=210, model=f'{app_label}.reproductivehealth',
required=True),
Crf(show_order=220, model=f'{app_label}.pregnancy', required=True),
Crf(show_order=230, model=f'{app_label}.nonpregnancy', required=True),
Crf(show_order=240, model=f'{app_label}.medicaldiagnoses', required=True),
Crf(show_order=250, model=f'{app_label}.heartattack', required=True),
Crf(show_order=260, model=f'{app_label}.cancer', required=True),
Crf(show_order=270, model=f'{app_label}.hivrelatedillness', required=True),
Crf(show_order=280, model=f'{app_label}.tuberculosis', required=True),
Crf(show_order=290, model=f'{app_label}.tbsymptoms', required=True),
Crf(show_order=300, model=f'{app_label}.substanceuse', required=True),
Crf(show_order=320, model=f'{app_label}.stigma', required=True),
Crf(show_order=330, model=f'{app_label}.stigmaopinion', required=True),
Crf(show_order=340,
model=f'{app_label}.positiveparticipant',
required=True),
Crf(show_order=350, model=f'{app_label}.accesstocare', required=False),
Crf(show_order=370, model=f'{app_label}.hivresult', required=True),
Crf(show_order=380,
model=f'{app_label}.elisahivresult',
required=False,
additional=True),
Crf(show_order=390,
model=f'{app_label}.pimacd4',
required=False,
additional=True),
Crf(show_order=400,
model=f'{app_label}.hicenrollment',
required=False,
additional=True),
Crf(show_order=410, model=f'{app_label}.subjectreferral', required=True),
)