def test_execute_pilatus6m_10images_crystfel(self):
referenceDataPath = self.dataPath / 'pilatus6m_10images_crystfel.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
task = ImageQualityIndicators(inData=inData)
task.execute()
self.assertFalse(task.isFailure())
outData = task.outData
self.assertTrue('imageQualityIndicators' in outData)
def test_execute(self):
referenceDataPath = self.dataPath / "bes_328.json"
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
task = ImageQualityIndicators(inData=inData)
task.execute()
self.assertFalse(task.isFailure())
outData = task.outData
self.assertTrue("imageQualityIndicators" in outData)
def test_execute(self):
referenceDataPath = self.dataPath / 'id30a1.json'
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
task = ImageQualityIndicators(inData=inData)
task.execute()
self.assertFalse(task.isFailure())
outData = task.outData
self.assertTrue('imageQualityIndicators' in outData)
self.assertEqual(304, len(outData['imageQualityIndicators']))
def test_execute_eiger4m_h5_10images(self):
referenceDataPath = self.dataPath / "eiger4m_h5_10images.json"
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
task = ImageQualityIndicators(inData=inData)
task.execute()
self.assertFalse(task.isFailure())
outData = task.outData
self.assertTrue("imageQualityIndicators" in outData)
self.assertEqual(len(outData["imageQualityIndicators"]), 51)
def test_execute(self):
referenceDataPath = self.dataPath / "inDataImageQualityIndicatorsTask.json"
inData = UtilsTest.loadAndSubstitueTestData(referenceDataPath)
task = ImageQualityIndicators(inData=inData)
task.execute()
self.assertFalse(task.isFailure())
outData = task.outData
self.assertTrue("imageQualityIndicators" in outData)
# self.assertTrue('resolution_limit' in outData['crystfel_results'][0])
self.assertEqual(72, len(outData["imageQualityIndicators"]))
def testGetH5FilePath_fastMesh(self):
filePath2 = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20171017/RAW_DATA/" +
"mesh2/MeshScan_02/mesh-opid30a3_2_0021.cbf")
(
h5MasterFilePath2,
h5DataFilePath2,
h5FileNumber2,
) = ImageQualityIndicators.getH5FilePath(filePath2,
batchSize=20,
isFastMesh=True)
h5MasterFilePath2Reference = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20171017/RAW_DATA/" +
"mesh2/MeshScan_02/mesh-opid30a3_2_1_master.h5")
self.assertEqual(h5MasterFilePath2, h5MasterFilePath2Reference,
"master path2")
h5DataFilePath2Reference = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20171017/RAW_DATA/" +
"mesh2/MeshScan_02/mesh-opid30a3_2_1_data_000001.h5")
self.assertEqual(h5DataFilePath2, h5DataFilePath2Reference,
"data path2")
#
# fast mesh 2
#
filePath2 = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20171017/RAW_DATA/mesh2" +
"/MeshScan_02/mesh-opid30a3_2_0321.cbf")
(
h5MasterFilePath2,
h5DataFilePath2,
h5FileNumber2,
) = ImageQualityIndicators.getH5FilePath(filePath2,
batchSize=20,
isFastMesh=True)
h5MasterFilePath2Reference = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20171017/RAW_DATA/mesh2/" +
"MeshScan_02/mesh-opid30a3_2_1_master.h5")
self.assertEqual(h5MasterFilePath2, h5MasterFilePath2Reference,
"master path2")
h5DataFilePath2Reference = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20171017/RAW_DATA/mesh2/" +
"MeshScan_02/mesh-opid30a3_2_1_data_000004.h5")
self.assertEqual(h5DataFilePath2, h5DataFilePath2Reference,
"data path2")
def testGetH5FilePath(self):
filePath1 = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20160204/RAW_DATA/" +
"meshtest/XrayCentering_01/mesh-meshtest_1_0001.cbf")
(
h5MasterFilePath1,
h5DataFilePath1,
h5FileNumber,
) = ImageQualityIndicators.getH5FilePath(filePath1, 9)
h5MasterFilePath1Reference = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20160204/RAW_DATA/" +
"meshtest/XrayCentering_01/mesh-meshtest_1_1_master.h5")
h5DataFilePath1Reference = pathlib.Path(
"/data/id30a3/inhouse/opid30a3/20160204/RAW_DATA/" +
"meshtest/XrayCentering_01/mesh-meshtest_1_1_data_000001.h5")
self.assertEqual(h5MasterFilePath1, h5MasterFilePath1Reference,
"masterPath1")
self.assertEqual(h5DataFilePath1, h5DataFilePath1Reference,
"dataPath1")