def parseTomoFolderAndCreateRefFiles(folderpath):
scanName = os.path.basename(folderpath)
parametersScanFilename = folderpath + '/' + scanName + '.xml'
print(parametersScanFilename)
tomoExperiment = esrfTomo.FastTomoExperiment(parametersScanFilename)
print('numberFlatField: ')
print(tomoExperiment.numberFlatField)
referenceFileNames = tomoExperiment.getReferencesFileNames()
if referenceFileNames == None:
tomoExperiment.createAverageWfandDf()
tomoExperiment.findCenterOfRotation()
print('Cor Found at ' + str(tomoExperiment.cor))
referenceFileNames = tomoExperiment.getReferencesFileNames()
projectionsFileNames = tomoExperiment.getProjectionsName()
projectionsFileNames.sort()
darkFieldFilename = tomoExperiment.getDarkFilename()
print(darkFieldFilename)
referenceFileNames.sort()
print(referenceFileNames)
ddict = {}
ddict['tomoFileName'] = parametersScanFilename
ddict['projections'] = projectionsFileNames
ddict['references'] = referenceFileNames
ddict['darkField'] = darkFieldFilename
ddict['COR'] = tomoExperiment.cor
return ddict
def parseESRFTomoFolder(folderpath):
print('ESRFTomoFolder')
scanName = os.path.basename(folderpath)
parametersScanFilename = folderpath + '/' + scanName + '.xml'
print(parametersScanFilename)
tomoExperiment = esrfTomo.FastTomoExperiment(parametersScanFilename)
print('numberFlatField: ')
print(tomoExperiment.numberFlatField)
tomoExperiment.createAverageWfandDf()
tomoExperiment.findCenterOfRotation()
print('Cor Found at ' + str(tomoExperiment.cor))
projectionsFileNames = tomoExperiment.getProjectionsName()
projectionsFileNames.sort()
darkFieldFilename = tomoExperiment.darkOutputFile
referenceFileNames = tomoExperiment.getReferencesFileNames()
referenceFileNames.sort()
print(referenceFileNames)
return projectionsFileNames, referenceFileNames, darkFieldFilename