def Lshapetest(self, plot=True):
node = np.array([
(-1.0, -1.0),
(0.0, -1.0),
(1.0, -1.0),
(1.0, 0.0),
(0.0, 0.0),
(0.0, 1.0),
(-1.0, 1.0),
(-1.0,0.0)], dtype=np.float)
cell = np.array([[0, 1, 4, 7],[1,2,3,4],[7,4,5,6]], dtype=np.int)
mesh = QuadrangleMesh(node, cell)
mesh.uniform_refine(n=2)
#mesh.node = mesh.node[np.lexsort(mesh.node[:,::-1].T)]
'''
l = len(mesh.node)
node1 = np.zeros((l,2))
node1[:9,:] = mesh.node[mesh.node[:,1] = -1]
node1[9:18,:] = mesh.node[mesh.node[:,1] = -1]
'''
if plot:
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.node = mesh.node[np.lexsort(mesh.node[:,::-1].T)]
mesh.find_node(axes,showindex = True)
#mesh.find_edge(axes)
#mesh.print()
plt.show()
def halfedgemesh(n=4, h=4):
"""
半边数据结构的网格
"""
node = np.array([(0, 0), (h, 0), (h, h), (0, h)], dtype=np.float64)
cell = np.array([(0, 1, 2, 3)], dtype=np.int_)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.uniform_refine(n)
return mesh
def refine_quad(self, l, plot=True):
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
NE = mesh.ds.NE
color = 3 * np.ones(NE * 2, dtype=np.int_)
color[1] = 1
while (color == 3).any():
red = color == 1
gre = color == 0
color[halfedge[red][:, [2, 3, 4]]] = 0
color[halfedge[gre][:, [2, 3, 4]]] = 1
colorlevel = ((color == 1) | (color == 2)).astype(np.int_)
mesh.hedgecolor = {'color': color, 'level': colorlevel}
c = np.array([1, 10000.5])
r = 10000
h = 1e-2
k = 0
NB = 0
fig = plt.figure()
axes = fig.gca()
plt.ion()
while k < l:
halfedge = mesh.ds.halfedge
halfedge1 = halfedge[:, 3]
node = mesh.node
flag = node - c
flag = flag[:, 0]**2 + flag[:, 1]**2
flag = flag <= r**2
flag1 = flag[halfedge[:, 0]].astype(int)
flag2 = flag[halfedge[halfedge1, 0]].astype(int)
markedge = flag1 + flag2 == 1
markedcell = halfedge[markedge, 1]
markedcell = np.unique(markedcell)
cell = np.unique(halfedge[:, 1])
nc = cell.shape[0]
markedcell1 = np.zeros(nc)
markedcell1[markedcell] = 1
print('makee', markedcell)
mesh.refine_quad(markedcell1.astype(np.bool_))
k += 1
print('循环', k, '次***************************')
print(np.c_[np.arange(mesh.ds.NE * 2), mesh.hedgecolor['color'],
mesh.hedgecolor['level']])
if plot:
plt.cla()
mesh.add_plot(axes)
plt.pause(0.001)
plt.ioff()
plt.show()
def project_test(self, u, p=2, mtype=0, plot=True):
from fealpy.mesh.simple_mesh_generator import triangle
if mtype == 0:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([0, 1, 2, 3], dtype=np.int)
cellLocation = np.array([0, 4], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
elif mtype == 1:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([0, 1, 2, 3, 0, 2], dtype=np.int)
cellLocation = np.array([0, 3, 6], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
elif mtype == 2:
h = 0.025
mesh = triangle([-1, 1, -1, 1], h, meshtype='polygon')
elif mtype == 3:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([[0, 1, 2, 3]], dtype=np.int)
mesh = QuadrangleMesh(node, cell)
mesh.uniform_refine()
mesh = PolygonMesh.from_mesh(mesh)
elif mtype == 4:
node = np.array([(-1, -1), (1, -1), (1, 0), (1, 1), (-1, 1),
(-1, 0)],
dtype=np.float)
cell = np.array([0, 1, 2, 5, 2, 3, 4, 5], dtype=np.int)
cellLocation = np.array([0, 4, 8], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
if True:
cell, cellLocation = mesh.entity('cell')
edge = mesh.entity('edge')
cell2edge = mesh.ds.cell_to_edge()
bc = mesh.entity_barycenter('edge')
uspace = ReducedDivFreeNonConformingVirtualElementSpace2d(mesh, p)
up = uspace.project(u)
up = uspace.project_to_smspace(up)
print(up)
integralalg = uspace.integralalg
error = integralalg.L2_error(u, up)
print(error)
A = uspace.matrix_A()
P = uspace.matrix_P()
sio.savemat('A.mat', {"A": A.toarray(), "P": P.toarray()})
if plot:
mesh.print()
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_edge(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
plt.show()
def verify_matrix(self, u, p=2, mtype=0, plot=True):
from fealpy.mesh.simple_mesh_generator import triangle
if mtype == 0:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([0, 1, 2, 3], dtype=np.int)
cellLocation = np.array([0, 4], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
elif mtype == 1:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([0, 1, 2, 3, 0, 2], dtype=np.int)
cellLocation = np.array([0, 3, 6], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
elif mtype == 2:
h = 0.1
mesh = triangle([-1, 1, -1, 1], h, meshtype='polygon')
elif mtype == 3:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([[0, 1, 2, 3]], dtype=np.int)
mesh = QuadrangleMesh(node, cell)
mesh.uniform_refine()
mesh = PolygonMesh.from_mesh(mesh)
uspace = ReducedDivFreeNonConformingVirtualElementSpace2d(mesh, p)
uspace.verify_matrix()
up = uspace.project(u)
up = uspace.project_to_smspace(up)
def quad_refine():
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
def quadMesh(self):
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
NE = mesh.ds.NE
color = 3 * np.ones(NE * 2, dtype=np.int_)
color[1] = 1
while (color == 3).any():
red = color == 1
gre = color == 0
color[halfedge[red][:, [2, 3, 4]]] = 0
color[halfedge[gre][:, [2, 3, 4]]] = 1
colorlevel = ((color == 1) | (color == 2)).astype(np.int_)
mesh.hedgecolor = {'color': color, 'level': colorlevel}
return mesh
def test_quadrangle_mesh():
from fealpy.mesh import QuadrangleMesh
node = np.array(
[
(0.0, 0.0), # 0 号点
(0.0, 1.0), # 1 号点
(0.0, 2.0), # 2 号点
(1.0, 0.0), # 3 号点
(1.0, 1.0), # 4 号点
(1.0, 2.0), # 5 号点
(2.0, 0.0), # 6 号点
(2.0, 1.0), # 7 号点
(2.0, 2.0), # 8 号点
],
dtype=np.float64)
cell = np.array(
[
(0, 3, 4, 1), # 0 号单元
(1, 4, 5, 3), # 1 号单元
(3, 6, 7, 4), # 2 号单元
(4, 7, 8, 5), # 3 号单元
],
dtype=np.int_)
mesh = QuadrangleMesh(node, cell)
cell2node = mesh.ds.cell_to_node()
cell2edge = mesh.ds.cell_to_edge()
cell2cell = mesh.ds.cell_to_cell()
edge2node = mesh.ds.edge_to_node()
edge2edge = mesh.ds.edge_to_edge()
edge2cell = mesh.ds.edge_to_cell()
node2node = mesh.ds.node_to_node()
node2edge = mesh.ds.node_to_edge()
node2cell = mesh.ds.node_to_cell()
# 加密测试
mesh.uniform_refine()
def refine_quad(self, plot=True):
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
halfedge = mesh.ds.halfedge
NE = mesh.ds.NE
color = 3 * np.ones(NE * 2, dtype=np.int_)
color[1] = 1
while (color == 3).any():
red = color == 1
gre = color == 0
color[halfedge[red][:, [2, 3, 4]]] = 0
color[halfedge[gre][:, [2, 3, 4]]] = 1
mesh.hedgecolor = color
c = np.array([0.8, 0.8])
r = 0.9
h = 1e-2
l = 10
k = 0
NB = 0
while k < l:
halfedge = mesh.ds.halfedge
halfedge1 = halfedge[:, 3]
node = mesh.node
flag = node - c
flag = flag[:, 0]**2 + flag[:, 1]**2
flag = flag <= r**2
flag1 = flag[halfedge[:, 0]].astype(int)
flag2 = flag[halfedge[halfedge1, 0]].astype(int)
markedge = flag1 + flag2 == 1
markedcell = halfedge[markedge, 1]
markedcell = np.unique(markedcell)
cell = np.unique(halfedge[:, 1])
nc = cell.shape[0]
markedcell1 = np.zeros(nc)
markedcell1[markedcell] = 1
print('makee', markedcell)
mesh.refine_quad(markedcell1.astype(np.bool_))
k += 1
print('循环', k, '次***************************')
if plot:
fig = plt.figure()
axes = fig.gca()
nindex = mesh.nodedata['level']
mesh.add_plot(axes)
#mesh.add_halfedge_plot(axes, showindex=True)
#mesh.find_node(axes, showindex=True, multiindex=nindex)
plt.show()
def project_test(self, u, p=2, mtype=0, plot=True):
from fealpy.mesh.simple_mesh_generator import triangle
if mtype == 0:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([0, 1, 2, 3], dtype=np.int)
cellLocation = np.array([0, 4], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
elif mtype == 1:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([0, 1, 2, 3, 0, 2], dtype=np.int)
cellLocation = np.array([0, 3, 6], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
elif mtype == 2:
h = 0.1
mesh = triangle([-1, 1, -1, 1], h, meshtype='polygon')
elif mtype == 3:
node = np.array([(-1, -1), (1, -1), (1, 1), (-1, 1)],
dtype=np.float)
cell = np.array([[0, 1, 2, 3]], dtype=np.int)
mesh = QuadrangleMesh(node, cell)
mesh.uniform_refine()
mesh = PolygonMesh.from_mesh(mesh)
cell, cellLocation = mesh.entity('cell')
edge = mesh.entity('edge')
cell2edge = mesh.ds.cell_to_edge()
uspace = DivFreeNonConformingVirtualElementSpace2d(mesh, p)
up = uspace.project(u)
print(up)
up = uspace.project_to_smspace(up)
print(up)
integralalg = uspace.integralalg
error = integralalg.L2_error(u, up)
print(error)
if plot:
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_edge(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
plt.show()
def init_mesh(self, n=1, meshtype='tri'):
node = np.array([
(-1, -1),
( 0, -1),
(-1, 0),
( 0, 0),
( 1, 0),
(-1, 1),
( 0, 1),
( 1, 1)], dtype=np.float)
if meshtype == 'tri':
cell = np.array([
(2, 0, 3),
(1, 3, 0),
(5, 2, 6),
(3, 6, 2),
(6, 3, 7),
(4, 7, 3)], dtype=np.int)
mesh = TriangleMesh(node, cell)
mesh.uniform_refine(n)
return mesh
elif meshtype == 'quad':
cell = np.array([
(0, 1, 3, 2),
(2, 3, 6, 5),
(3, 4, 7, 6)], dtype=np.int)
mesh = QuadrangleMesh(node, cell)
mesh.uniform_refine(n)
return mesh
elif meshtype == 'poly':
cell = np.array([
(2, 0, 3),
(1, 3, 0),
(5, 2, 6),
(3, 6, 2),
(6, 3, 7),
(4, 7, 3)], dtype=np.int)
mesh = TriangleMesh(node, cell)
mesh.uniform_refine(n)
nmesh = TriangleMeshWithInfinityNode(mesh)
pnode, pcell, pcellLocation = nmesh.to_polygonmesh()
pmesh = PolygonMesh(pnode, pcell, pcellLocation)
return pmesh
#!/usr/bin/env python3
#
import numpy as np
import sys
import matplotlib.pyplot as plt
import time
from fealpy.mesh import HalfEdgeMesh2d,Quadtree
from fealpy.mesh import TriangleMesh, PolygonMesh, QuadrangleMesh
cell = np.array([[0,1,2,3],[1,4,5,2]],dtype = np.int)
node = np.array([[0,0],[1,0],[1,1],[0,1],[2,0],[2,1]], dtype = np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
#mesh.uniform_refine(n=4)
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_cell(axes, showindex=True)
plt.show()
c = np.array([0.5,0.5])
r = 0.5
maxit = 6
k=0
while k < maxit:
aopts = mesh.adaptive_options(method='numrefine', maxcoarsen=3, HB=True)
node = mesh.node
h = np.sqrt(mesh.cell_area())
print('NN', mesh.number_of_nodes())
def refine_quad(self, plot=True):
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
#mesh.uniform_refine()
mesh = HalfEdgeMesh.from_mesh(mesh)
c = np.array([0.8, 0.8])
r = 0.5
h = 1e-2
l = 6
k = 0
NB = 0
while k < l:
halfedge = mesh.ds.halfedge
halfedge1 = halfedge[:, 3]
node = mesh.node
flag = node - c
flag = flag[:, 0]**2 + flag[:, 1]**2
flag = flag <= r**2
flag1 = flag[halfedge[:, 0]].astype(int)
flag2 = flag[halfedge[halfedge1, 0]].astype(int)
markedge = flag1 + flag2 == 1
markedcell = halfedge[markedge, 1]
markedcell = np.unique(markedcell)
cell = np.unique(halfedge[:, 1])
nc = cell.shape[0]
markedcell1 = np.zeros(nc)
markedcell1[markedcell] = 1
print('makee', markedcell)
mesh.refine_quad(markedcell1)
k += 1
print('循环', k, '次***************************')
if plot:
fig = plt.figure()
axes = fig.gca()
nindex = mesh.nodedata['level']
mesh.add_plot(axes)
#mesh.add_halfedge_plot(axes, showindex=True)
#mesh.find_node(axes, showindex=True, multiindex=nindex)
plt.show()
if 0:
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
cindex, = np.nonzero(mesh.ds.cflag)
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_cell(axes, showindex=True, multiindex=cindex)
NN = mesh.number_of_nodes()
nindex = np.zeros(NN, dtype=np.int)
halfedge = mesh.ds.halfedge
nindex = mesh.nodedata['level']
cindex = mesh.get_data('cell', 'level')
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True, multiindex=nindex)
mesh.find_cell(axes, showindex=True, multiindex=cindex)
plt.show()
def init_mesh(self, meshtype='tri', returnnc=False, p=None):
if meshtype == 'tri':
t = (np.sqrt(5) - 1)/2
node = np.array([
[ 0, 1, t],
[ 0, 1,-t],
[ 1, t, 0],
[ 1,-t, 0],
[ 0,-1,-t],
[ 0,-1, t],
[ t, 0, 1],
[-t, 0, 1],
[ t, 0,-1],
[-t, 0,-1],
[-1, t, 0],
[-1,-t, 0]], dtype=np.float64)
cell = np.array([
[6, 2, 0],
[3, 2, 6],
[5, 3, 6],
[5, 6, 7],
[6, 0, 7],
[3, 8, 2],
[2, 8, 1],
[2, 1, 0],
[0, 1,10],
[1, 9,10],
[8, 9, 1],
[4, 8, 3],
[4, 3, 5],
[4, 5,11],
[7,10,11],
[0,10, 7],
[4,11, 9],
[8, 4, 9],
[5, 7,11],
[10,9,11]], dtype=np.int)
node, d = self.project(node)
if returnnc:
return node, cell
else:
if p is None:
from fealpy.mesh import TriangleMesh
return TriangleMesh(node, cell)
else:
from fealpy.mesh import LagrangeTriangleMesh
return LagrangeTriangleMesh(node, cell, p=p, surface=self)
elif meshtype == 'quad':
node = np.array([
(-1, -1, -1),
(-1, -1, 1),
(-1, 1, -1),
(-1, 1, 1),
(1, -1, -1),
(1, -1, 1),
(1, 1, -1),
(1, 1, 1)], dtype=np.float64)
cell = np.array([
(0, 1, 4, 5),
(6, 7, 2, 3),
(2, 3, 0, 1),
(4, 5, 6, 7),
(1, 3, 5, 7),
(2, 0, 6, 4)], dtype=np.int_)
node, d = self.project(node)
if returnnc:
return node, cell
else:
if p is None:
from fealpy.mesh import QuadrangleMesh
return QuadrangleMesh(node, cell)
else:
from fealpy.mesh import LagrangeQuadrangleMesh
return LagrangeQuadrangleMesh(node, cell, p=p, surface=self)
def animation_plot(self, method='quad', plot=True):
if method == 'quad':
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
NE = mesh.ds.NE
color = 3 * np.ones(NE * 2, dtype=np.int_)
color[1] = 1
while (color == 3).any():
red = color == 1
gre = color == 0
color[halfedge[red][:, [2, 3, 4]]] = 0
color[halfedge[gre][:, [2, 3, 4]]] = 1
colorlevel = ((color == 1) | (color == 2)).astype(np.int_)
mesh.hedgecolor = {'color': color, 'level': colorlevel}
mesh.ds.NV = 4
elif method == 'rg':
cell = np.array([[0, 1, 2], [0, 2, 3], [1, 4, 5], [2, 1, 5]],
dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = TriangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
NE = mesh.ds.NE
color = np.zeros(NE * 2, dtype=np.int_)
mesh.hedgecolor = color
#mesh.ds.NV = 3
elif method == 'nvb':
cell = np.array([[0, 1, 2], [0, 2, 3], [1, 4, 5], [2, 1, 5]],
dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = TriangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
NE = mesh.ds.NE
color = np.zeros(NE * 2, dtype=np.int_)
color[[2, 3, 10, 11]] = 1
mesh.hedgecolor = color
elif method == 'poly':
node = np.array([
(0.0, 0.0),
(0.0, 1.0),
(1.0, 0.0),
(1.0, 1.0),
],
dtype=np.float)
cell = np.array([0, 2, 3, 0, 3, 1], dtype=np.int)
cellLocation = np.array([0, 3, 6], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
r = 0.5
h = 1e-2
k = 0
N = 19
fig = plt.figure()
axes = fig.gca()
plt.ion()
for i in range(N):
c = np.array([i * (2 / N), 0.8])
k = 0
sta1 = time.time()
while True:
halfedge = mesh.ds.halfedge
pre = halfedge[:, 3]
node = mesh.entity('node')
flag = np.linalg.norm(node - c, axis=1) < r
flag1 = flag[halfedge[:, 0]].astype(int)
flag2 = flag[halfedge[pre, 0]].astype(int)
isMarkedHEdge = flag1 + flag2 == 1
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[halfedge[isMarkedHEdge, 1]] = True
isMarkedCell[cstart:] = isMarkedCell[cstart:] & (
mesh.cell_area() > h**2)
if (~isMarkedCell[cstart:]).all():
break
if method == 'quad':
mesh.refine_quad(isMarkedCell)
elif method == 'rg':
mesh.refine_triangle_rg(isMarkedCell)
elif method == 'nvb':
mesh.refine_triangle_nvb(isMarkedCell)
elif method == 'poly':
mesh.refine_poly(isMarkedCell)
k += 1
print('加密', k, i, '次***************************')
k = 0
sta2 = time.time()
aa = 2 * i
bb = 2 * i + 1
plt.cla()
mesh.add_plot(axes, linewidths=0.4)
#fig.savefig('%f.png' %aa, dpi=600, bbox_inches='tight')
plt.pause(0.01)
while k < 10:
halfedge = mesh.ds.halfedge
pre = halfedge[:, 3]
node = mesh.entity('node')
flag = np.linalg.norm(node - c, axis=1) < r
flag1 = flag[halfedge[:, 0]].astype(int)
flag2 = flag[halfedge[pre, 0]].astype(int)
isMarkedHEdge = flag1 + flag2 == 1
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[halfedge[isMarkedHEdge, 1]] = True
isMarkedCell[cstart:] = ~isMarkedCell[cstart:] & (
mesh.cell_area() < 0.5)
if method == 'quad':
mesh.coarsen_quad(isMarkedCell)
elif method == 'rg':
mesh.coarsen_triangle_rg(isMarkedCell)
elif method == 'nvb':
mesh.coarsen_triangle_nvb(isMarkedCell)
elif method == 'poly':
mesh.coarsen_poly(isMarkedCell)
if (~isMarkedCell).all():
break
k += 1
print('循环', k, '次***************************')
plt.cla()
mesh.add_plot(axes, linewidths=0.4)
#fig.savefig('%f.png' %bb, dpi=600, bbox_inches='tight')
sta3 = time.time()
plt.pause(0.01)
print('加密时间:', sta2 - sta1)
print('粗化时间:', sta3 - sta2)
plt.ioff()
plt.show()
def refine_RB_test(self, plot=True):
node = np.array([
(0.0, 0.0),
(1.0, 0.0),
(1.0, 1.0),
(0.0, 1.0)], dtype=np.float)
cell = np.array([[0, 1, 2, 3]], dtype=np.int)
mesh = QuadrangleMesh(node, cell)
mesh.uniform_refine()
markedCell = np.array([3], dtype=np.int)
mesh.refine_RB(markedCell)
if plot:
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_edge(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
mesh.print()
plt.show()
def coarsen_quad(self, plot=True):
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
NE = mesh.ds.NE
color = 3 * np.ones(NE * 2, dtype=np.int_)
color[1] = 1
while (color == 3).any():
red = color == 1
gre = color == 0
color[halfedge[red][:, [2, 3, 4]]] = 0
color[halfedge[gre][:, [2, 3, 4]]] = 1
colorlevel = ((color == 1) | (color == 2)).astype(np.int_)
mesh.hedgecolor = {'color': color, 'level': colorlevel}
for i in range(1):
NC = mesh.number_of_all_cells()
isMarkedCell = np.ones(NC, dtype=np.bool_)
mesh.refine_quad(isMarkedCell)
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[[3, 5, 7, 8]] = True
#isMarkedCell[[1, 3, 12,18, 20, 17, 16, 9, 7, 2, 4,6, 7, 8, 9 , 27, 15,
# 8, 23, 32, 5, 24, 16, 29, 4, 7, 28, 11, 14, 22, 31, 19]] = True
mesh.coarsen_quad(isMarkedCell)
print(np.c_[np.arange(len(mesh.ds.halfedge)), mesh.ds.halfedge])
if 0:
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[[
20, 21, 23, 22, 18, 24, 26, 11, 1, 7, 13, 3, 8, 15, 12, 17
]] = True
mesh.coarsen_quad(isMarkedCell)
for i in range(0):
print(i, '*************************************************')
NC = mesh.number_of_all_cells()
isMarkedCell = np.ones(NC, dtype=np.bool_)
mesh.refine_quad(isMarkedCell)
print(np.where(mesh.hedgecolor['color'] == 2))
#print(np.c_[np.arange(mesh.ds.NE*2), mesh.hedgecolor['color'],
# mesh.hedgecolor['level']])
#print(np.c_[np.arange(mesh.ds.NE*2), mesh.halfedgedata['level']])
if plot:
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.add_halfedge_plot(axes, showindex=True)
mesh.find_node(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
plt.show()
import numpy as np
from fealpy.mesh import QuadrangleMesh
import matplotlib.pyplot as plt
node = np.array([[0.0, 0.0],
[0.5, 0.0],
[1.0, 0.0],
[0.0, 0.5],
[0.5, 0.5],
[1.0, 0.5],
[0.0, 1.0],
[0.5, 1.0],
[1.0, 1.0]], dtype=np.float)
cell = np.array([[0, 1, 4, 3],
[3, 4, 7, 6],
[1, 2, 5, 4],
[4, 5, 8, 7]], dtype=np.int32)
mesh = QuadrangleMesh(node, cell)
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
plt.show()
def interpolation(self, n=2, plot=True):
from fealpy.pde.poisson_2d import CosCosData
from fealpy.functionspace import ConformingVirtualElementSpace2d
pde = CosCosData()
node = np.array([(0, 0), (1, 0), (1, 1), (0, 1)], dtype=np.float64)
cell = np.array([(0, 1, 2, 3)], dtype=np.int_)
mesh = QuadrangleMesh(node, cell)
#mesh = PolygonMesh.from_mesh(mesh)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.uniform_refine(n=n)
#mesh.print()
space = ConformingVirtualElementSpace2d(mesh, p=1)
uI = space.interpolation(pde.solution)
up = space.project_to_smspace(uI)
error = space.integralalg.L2_error(pde.solution, up)
print(error)
if plot:
fig = plt.figure()
axes = fig.gca()
#mesh.add_halfedge_plot(axes, showindex=True)
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_edge(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
plt.show()
def animation_plot(self, method='quad', plot=True):
if method == 'quad':
cell = np.array([[0, 1, 2, 3], [1, 4, 5, 2]], dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = QuadrangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
NE = mesh.ds.NE
color = 3 * np.ones(NE * 2, dtype=np.int_)
color[1] = 1
while (color == 3).any():
red = color == 1
gre = color == 0
color[halfedge[red][:, [2, 3, 4]]] = 0
color[halfedge[gre][:, [2, 3, 4]]] = 1
colorlevel = ((color == 1) | (color == 2)).astype(np.int_)
mesh.hedgecolor = {'color': color, 'level': colorlevel}
elif method == 'rg':
cell = np.array([[0, 1, 2], [0, 2, 3], [1, 4, 5], [2, 1, 5]],
dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = TriangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
NE = mesh.ds.NE
color = np.zeros(NE * 2, dtype=np.int_)
mesh.hedgecolor = color
elif method == 'nvb':
cell = np.array([[0, 1, 2], [0, 2, 3], [1, 4, 5], [2, 1, 5]],
dtype=np.int)
node = np.array([[0, 0], [1, 0], [1, 1], [0, 1], [2, 0], [2, 1]],
dtype=np.float)
mesh = TriangleMesh(node, cell)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
NE = mesh.ds.NE
color = np.zeros(NE * 2, dtype=np.int_)
color[[2, 3, 10, 11]] = 1
mesh.hedgecolor = color
elif method == 'poly':
node = np.array([
(0.0, 0.0),
(0.0, 1.0),
(1.0, 0.0),
(1.0, 1.0),
],
dtype=np.float)
cell = np.array([0, 2, 3, 0, 3, 1], dtype=np.int)
cellLocation = np.array([0, 3, 6], dtype=np.int)
mesh = PolygonMesh(node, cell, cellLocation)
mesh = HalfEdgeMesh2d.from_mesh(mesh)
mesh.init_level_info()
halfedge = mesh.ds.halfedge
cstart = mesh.ds.cellstart
r = 0.5
h = 1e-2
k = 0
N = 30
fig = plt.figure()
axes = fig.gca()
plt.ion()
for i in range(N):
c = np.array([i * (2 / N), 0.8])
k = 0
sta1 = time.time()
while True:
halfedge = mesh.ds.halfedge
pre = halfedge[:, 3]
node = mesh.entity('node')
flag = np.linalg.norm(node - c, axis=1) < r
flag1 = flag[halfedge[:, 0]].astype(int)
flag2 = flag[halfedge[pre, 0]].astype(int)
isMarkedHEdge = flag1 + flag2 == 1
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[halfedge[isMarkedHEdge, 1]] = True
isMarkedCell[cstart:] = isMarkedCell[cstart:] & (
mesh.cell_area() > h**2)
if (~isMarkedCell[cstart:]).all():
break
if method == 'quad':
mesh.refine_quad(isMarkedCell)
elif method == 'rg':
mesh.refine_triangle_rg(isMarkedCell)
elif method == 'nvb':
mesh.refine_triangle_nvb(isMarkedCell)
elif method == 'poly':
mesh.refine_poly(isMarkedCell)
k += 1
print('加密', k, i, '次***************************')
k = 0
sta2 = time.time()
while k < 10:
halfedge = mesh.ds.halfedge
pre = halfedge[:, 3]
node = mesh.entity('node')
flag = np.linalg.norm(node - c, axis=1) < r
flag1 = flag[halfedge[:, 0]].astype(int)
flag2 = flag[halfedge[pre, 0]].astype(int)
isMarkedHEdge = flag1 + flag2 == 1
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[halfedge[isMarkedHEdge, 1]] = True
isMarkedCell[cstart:] = ~isMarkedCell[cstart:] & (
mesh.cell_area() < 0.5)
if method == 'quad':
mesh.coarsen_quad(isMarkedCell)
elif method == 'rg':
mesh.coarsen_triangle_rg(isMarkedCell, i=i)
elif method == 'nvb':
mesh.coarsen_triangle_nvb(isMarkedCell)
elif method == 'poly':
mesh.coarsen_poly(isMarkedCell)
if (~isMarkedCell).all():
break
k += 1
print('循环', k, '次***************************')
sta3 = time.time()
print('加密时间:', sta2 - sta1)
print('粗化时间:', sta3 - sta2)
if 1:
plt.cla()
mesh.add_plot(axes)
#mesh.find_node(axes, showindex = True)
#mesh.find_cell(axes, showindex = True)
#mesh.add_halfedge_plot(axes, showindex=True)
plt.pause(0.001)
if i == 10000:
break
plt.ioff()
plt.show()
if 0:
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[[20, 23, 19, 16, 4, 5, 6, 7, 24, 15]] = True
print('*************lll*********')
mesh.coarsen_poly(isMarkedCell)
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[[1, 2, 3, 20, 10, 11, 13, 16]] = True
print('*************lll*********')
mesh.coarsen_poly(isMarkedCell)
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[[1, 5, 13, 15]] = True
print('*************lll*********')
mesh.coarsen_poly(isMarkedCell)
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[[10, 11, 12]] = True
print('*************lll*********')
mesh.coarsen_poly(isMarkedCell)
NC = mesh.number_of_all_cells()
isMarkedCell = np.zeros(NC, dtype=np.bool_)
isMarkedCell[[4, 5, 6, 7]] = True
print('*************lll*********')
mesh.coarsen_poly(isMarkedCell)
#mesh.print()
#print(mesh.ds.edge_to_cell())
print(np.c_[np.arange(len(halfedge)), halfedge])
print(
np.where(
halfedge[halfedge[:, 2], 3] != np.arange(len(halfedge))))
fig = plt.figure()
axes = fig.gca()
mesh.add_plot(axes)
mesh.find_node(axes, showindex=True)
mesh.find_cell(axes, showindex=True)
mesh.add_halfedge_plot(axes, showindex=True)
plt.show()
scale=1)
axes.quiver(space.ccenter[:, 0],
space.ccenter[:, 1],
A0[:, 0],
A0[:, 1],
angles='xy',
scale_units='xy',
scale=1)
plt.show()
node = np.array([(0, 0), (1, 0), (1, 1), (0, 1), (0.5, 0), (1, 0.4), (0.3, 1),
(0, 0.6), (0.5, 0.45)],
dtype=np.float)
cell = np.array([(0, 4, 8, 7), (4, 1, 5, 8), (7, 8, 6, 3), (8, 5, 2, 6)],
dtype=np.int)
pde = CosCosData()
mesh = QuadrangleMesh(node, cell)
mesh.uniform_refine(7)
space = QuadBilinearFiniteElementSpace(mesh)
uI = space.interpolation(pde.solution)
L2 = space.integralalg.L2_error(pde.solution, uI.value)
print("L2:", L2)
H1 = space.integralalg.L2_error(pde.gradient, uI.grad_value)
print("H1:", H1)