def submit_web(resouce_type, data, user):
global test_resource
test_resource = partial(Resource, owner_id=user.email)
result = save_resource(resouce_type, data)
assert result is not None
commit_buffers(BUF)
return result
def init_superuser():
superuser = User(email='super')
db.session.add(superuser)
global test_resource
test_resource = partial(Resource, owner_id=superuser.email)
if __name__ == '__main__':
from server import app
with app.app_context():
init_superuser()
init_practitioner()
init('Organization')
init_conditions()
patient_ids = []
sequence_ids = []
gene_names = []
variant_ids = []
for example_file in os.listdir(os.path.join(BASEDIR, 'examples/vcf')):
load_vcf_example(os.path.join(BASEDIR, 'examples/vcf', example_file))
sequence_amount = len(sequence_ids)
for _ in xrange(10):
patient = rand_patient()
create_diagnosticreport(patient.get_reference())
commit_buffers(BUF)
def submit_web(resouce_type, data, user):
global test_resource
test_resource = partial(Resource, owner_id=user.email)
save_resource(resouce_type, data)
commit_buffers(BUF)
def submit_web(resouce_type, data, user):
global test_resource
test_resource = partial(Resource, owner_id=user.email)
save_resource(resouce_type, data)
commit_buffers(BUF)