def test_from_epsg_neg():
try:
crs.from_epsg(-1)
except ValueError:
pass
except:
raise
def linestrings_to_shapefile(linestrings, shp_fname):
schema_properties = OrderedDict(
[
("gid", "int")
]
)
my_schema = {
"geometry": "LineString",
"properties": schema_properties
}
my_driver = "ESRI Shapefile"
my_crs = from_epsg(27700)
with fiona.open(shp_fname, "w", driver=my_driver, crs=my_crs, schema=my_schema) as outpf:
for gid in linestrings:
linestring = linestrings[gid]
outpf.write({
"geometry": mapping(linestring),
"properties": {
"gid": gid
}
})
def geoframe(self, simplify=None, predicate=None, crs=None, epsg=None):
"""
Return geopandas dataframe
:param simplify: Integer or None. Simplify the geometry to a tolerance, in the units of the geometry.
:param predicate: A single-argument function to select which records to include in the output.
:param crs: Coordinate reference system information
:param epsg: Specifiy the CRS as an EPGS number.
:return: A Geopandas GeoDataFrame
"""
import geopandas
from shapely.wkt import loads
from fiona.crs import from_epsg
if crs is None and epsg is None and self.epsg is not None:
epsg = self.epsg
if crs is None:
try:
crs = from_epsg(epsg)
except TypeError:
raise TypeError('Must set either crs or epsg for output.')
df = self.dataframe(predicate=predicate)
geometry = df['geometry']
if simplify:
s = geometry.apply(lambda x: loads(x).simplify(simplify))
else:
s = geometry.apply(lambda x: loads(x))
df['geometry'] = geopandas.GeoSeries(s)
return geopandas.GeoDataFrame(df, crs=crs, geometry='geometry')
def _prepare_geocode_result(results):
"""
Helper function for the geocode function
Takes a dict where keys are index entries, values are tuples containing:
(address, (lat, lon))
"""
# Prepare the data for the DataFrame as a dict of lists
d = defaultdict(list)
index = []
for i, s in iteritems(results):
address, loc = s
# loc is lat, lon and we want lon, lat
if loc is None:
p = Point()
else:
p = Point(loc[1], loc[0])
if address is None:
address = np.nan
d['geometry'].append(p)
d['address'].append(address)
index.append(i)
df = geopandas.GeoDataFrame(d, index=index)
df.crs = from_epsg(4326)
return df
def to_crs(self, crs=None, epsg=None):
"""Transform geometries to a new coordinate reference system
This method will transform all points in all objects. It has
no notion or projecting entire geometries. All segments
joining points are assumed to be lines in the current
projection, not geodesics. Objects crossing the dateline (or
other projection boundary) will have undesirable behavior.
"""
from fiona.crs import from_epsg
if self.crs is None:
raise ValueError('Cannot transform naive geometries. '
'Please set a crs on the object first.')
if crs is None:
try:
crs = from_epsg(epsg)
except TypeError:
raise TypeError('Must set either crs or epsg for output.')
proj_in = pyproj.Proj(preserve_units=True, **self.crs)
proj_out = pyproj.Proj(preserve_units=True, **crs)
project = partial(pyproj.transform, proj_in, proj_out)
result = self.apply(lambda geom: transform(project, geom))
result.__class__ = GeoSeries
result.crs = crs
return result
def to_crs(old, new, new_epsg=4326):
"""Convert old shapefile to new shapefile with new crs.
"""
crs = from_epsg(new_epsg)
with fiona.open(old, 'r') as source:
sink_schema = source.schema.copy()
p_in = Proj(source.crs)
with fiona.open(
new, 'w',
crs=crs,
driver=source.driver,
schema=sink_schema,
) as sink:
p_out = Proj(sink.crs)
for f in source:
try:
assert f['geometry']['type'] == "Polygon"
new_coords = []
for ring in f['geometry']['coordinates']:
x2, y2 = transform(p_in, p_out, *zip(*ring))
new_coords.append(zip(x2, y2))
f['geometry']['coordinates'] = new_coords
sink.write(f)
except Exception, e:
# In practice, this won't work for most shapes since they
# are frequently of type MultiPolygon.
print("Error transforming feature {}".format(f['id']))
raise
def reproject(filename, crs=from_epsg(4326)):
out = []
with fiona.open(filename) as inp:
output_schema = inp.schema.copy()
output_schema['geometry'] = 'MultiPolygon'
inp_projection = Proj(inp.crs)
out_projection = Proj(crs)
for feature in inp:
try:
geom = feature['geometry']
if geom['type'] == 'Polygon':
parts = [geom['coordinates']]
elif geom['type'] == 'MultiPolygon':
parts = geom['coordinate']
new_coords = []
for part in parts:
inner_coords = []
for ring in part:
x2, y2 = transform(inp_projection, out_projection,
*zip(*ring))
inner_coords.append(zip(x2, y2))
new_coords.append(inner_coords)
feature['geometry']['type'] = 'MultiPolygon'
feature['geometry']['coordinates'] = new_coords
out.append(feature)
except Exception:
print 'Error transforming feature ' + feature['id']
return out
def boreholes_to_shape(boreholes, shapefile,
driver=None, epsg=None, fields=None):
'''write boreholes to shapefile as points'''
# crs from epsg code
if epsg is not None:
crs = from_epsg(epsg)
else:
crs = None
# shapefile schema
schema = Borehole.schema.copy()
if fields is not None:
schema['properties'].extend(fields)
# shapefile write arguments
shape_kwargs = {
'driver': driver,
'schema': schema,
'crs': crs,
}
keys = [k for k, _ in schema['properties']]
log.info('writing to {f:}'.format(f=os.path.basename(shapefile)))
with fiona.open(shapefile, 'w', **shape_kwargs) as dst:
for borehole in boreholes:
record = {
'geometry': borehole.geometry,
'properties': borehole.as_dict(keys=keys),
}
dst.write(record)
def export_projectionlines(shapefile, cross_sections, driver=None, epsg=None):
# crs from epsg code
if epsg is not None:
crs = from_epsg(epsg)
else:
crs = None
# schema
schema = {'geometry': 'LineString', 'properties': {'label': 'str'}}
boreholeschema = Borehole.schema.copy()
schema['properties'].update(boreholeschema['properties'])
keys = [k for k, _ in boreholeschema['properties']]
# shapefile write arguments
shape_kwargs = {
'driver': driver,
'schema': schema,
'crs': crs,
}
log.info('writing to {f:}'.format(f=os.path.basename(shapefile)))
with fiona.open(shapefile, 'w', **shape_kwargs) as dst:
for cs in cross_sections:
for distance, borehole in cs.boreholes:
projectionline = LineString([
asShape(borehole.geometry),
cs.shape.interpolate(distance),
])
properties = {'label': cs.label}
properties.update(borehole.as_dict(keys=keys))
dst.write({
'geometry': mapping(projectionline),
'properties': properties,
})
def bbox_convert(bbox, from_epsg, to_epsg):
bbox = gpd.GeoSeries([Point(bbox[0], bbox[1]),
Point(bbox[2], bbox[3])],
crs=crs.from_epsg(from_epsg))
bbox = bbox.to_crs(epsg=to_epsg)
bbox = [bbox[0].x, bbox[0].y, bbox[1].x, bbox[1].y]
return bbox
def export_endpoints(shapefile, cross_sections, driver=None, epsg=None):
# crs from epsg code
if epsg is not None:
crs = from_epsg(epsg)
else:
crs = None
# schema
schema = {'geometry': 'Point', 'properties': {'label': 'str'}}
# shapefile write arguments
shape_kwargs = {
'driver': driver,
'schema': schema,
'crs': crs,
}
log.info('writing to {f:}'.format(f=os.path.basename(shapefile)))
with fiona.open(shapefile, 'w', **shape_kwargs) as dst:
for cs in cross_sections:
startpoint = Point(cs.shape.coords[0])
endpoint = Point(cs.shape.coords[-1])
dst.write({
'geometry': mapping(startpoint),
'properties': {'label': cs.label}
})
dst.write({
'geometry': mapping(endpoint),
'properties': {'label': cs.label + '`'}
})
def geoframe(self, sql, simplify=None, crs=None, epsg=4326):
"""
Return geopandas dataframe
:param simplify: Integer or None. Simplify the geometry to a tolerance, in the units of the geometry.
:param crs: Coordinate reference system information
:param epsg: Specifiy the CRS as an EPGS number.
:return: A Geopandas GeoDataFrame
"""
import geopandas
from shapely.wkt import loads
from fiona.crs import from_epsg
if crs is None:
try:
crs = from_epsg(epsg)
except TypeError:
raise TypeError('Must set either crs or epsg for output.')
df = self.dataframe(sql)
geometry = df['geometry']
if simplify:
s = geometry.apply(lambda x: loads(x).simplify(simplify))
else:
s = geometry.apply(lambda x: loads(x))
df['geometry'] = geopandas.GeoSeries(s)
return geopandas.GeoDataFrame(df, crs=crs, geometry='geometry')
def write_shapefile(shp_gdf, es_df, out_path):
""" Join the ES data frame to the shapefile geodataframe and write the
result to a new shapefile.
Args:
shp_gdf: Geodataframe of SEPA waterbody catchments
es_df: Data frame of ES presence/absence.
out_path: Output file path.
Returns:
None. A shapefile is written to the specified location.
"""
# Copy the GDF so that it is not modified
shp = shp_gdf.copy()
# Delete unwanted columns
del shp['WB_Name'], shp['Area_km2'], shp['Status2013']
# Set indices
shp.index = shp['WB_ID']
# Join to "inter" WBs
df = shp.join(es_df, how='left')
# Set spatial ref
df.crs = from_epsg(27700)
# Fill NoData
df.fillna(-9999, inplace=True)
# Write to output
# Convert back to GDF (even though it already is one!) to avoid gpd errors
df = gpd.GeoDataFrame(df)
df.to_file(out_path)
def write_hob_shapefile(hob_df,shp_fout,model_epsg):
'''Writes the groundwater observation locations to a 2D point shapefile.'''
schema = {'geometry':'Point','properties':{'Site':'str','SiteName':'str',\
'Head (m)':'float','DOW (m)':'float','NWIS_DTW (m)':'float',\
'DOW-DTW (m)':'float','ModelLand (m)':'float',\
'WellElev (m)':'float','NWISLand (m)':'float',\
'(Lay,Row,Col)':'str','NWIS_Link':'str','Violation':'str'}}
with fiona.collection(shp_fout, "w", "ESRI Shapefile",crs=from_epsg(model_epsg),schema=schema) as output:
for index,irow in hob_df.iterrows():
isite = str(index)
ilink = http_dict['GW'][0] + str(isite) + http_dict['GW'][1]
iname = irow['station_nm']
ihob = irow['HeadObs']
idow = irow['well_depth_va']
idtw = irow['lev_va']
iwellelev = irow['well_elev']
inwis_land = irow['alt_va']
imodel_land = irow['ModelTop']
irowcol = '(%i,%i,%i)'%(irow['Layer'],irow['Row'],irow['Column'])
iexclude = irow['Violation']
point = Point(irow['Projected_X'],irow['Projected_Y'])
output.write({'geometry': mapping(point),
'properties':{'Site':isite,'SiteName':iname,\
'Head (m)':ihob,'DOW (m)':idow,'NWIS_DTW (m)':idtw,\
'DOW-DTW (m)':(idow-idtw),'ModelLand (m)':imodel_land,\
'WellElev (m)':iwellelev,'NWISLand (m)':inwis_land,\
'(Lay,Row,Col)':irowcol,'NWIS_Link':ilink,'Violation':iexclude}})
return
def write_discharge_shapefile(discharge_df,shp_fout,model_epsg,discharge_label):
'''Writes the discharge measurement locations to a 2D point shapefile.'''
schema = {'geometry':'Point','properties':{'Site':'int','SiteName':'str',\
'GageElev':'float','NObs':'int',\
discharge_label:'float','StdError':'float',\
'NWIS_Link':'str'}}
with fiona.collection(shp_fout, "w", "ESRI Shapefile",crs=from_epsg(model_epsg),schema=schema) as output:
for index,irow in discharge_df.iterrows():
isite = int(index)
isite = str(isite).zfill(8) # NWIS discharge ids minimum 8 characters
iname = irow['station_nm']
igage = irow['alt_va']
inobs = irow['NObs']
imean = irow[discharge_label]
istd = irow['StdError']
ilink = http_dict['ST'] + str(isite)
point = Point(irow['Projected_X'],irow['Projected_Y'])
output.write({'geometry': mapping(point),
'properties':{'Site':isite,'SiteName':iname,\
'GageElev':igage,'NObs':inobs,\
discharge_label:imean,'StdError':istd,\
'NWIS_Link':ilink}})
return
def make_shapefile(data, name):
path = os.path.join('op_data',name + '.shp')
crs = crs = from_epsg('29902')
if type(data) == dict:
a_schema = {'geometry': 'Point',
'properties': {'name':'str', 'address':'str'}
}
with fiona.open(path, "w",
driver= 'ESRI Shapefile',
crs= crs,
schema= a_schema) as output:
for k, v in data.items():
parts = k.split(',')
name = parts[0]
output.write({
'properties':{'name':name, 'address':k},
'geometry':geometry.mapping(v)})
else:
geom_type = data.geom_type
a_schema = {'geometry': geom_type,
'properties': {'name':'str'}
}
with fiona.open(path, "w",
driver= 'ESRI Shapefile',
crs= crs,
schema= a_schema) as output:
output.write({
'properties':{'name':name},
'geometry':geometry.mapping(data)})
def df2shp(df, folder, layername, dtypes, gtype, epsg):
"""Convert a processed df to a shapefile.
'df' is a dataframe.
'folder' is the path to the folder where the shapefile will be saved.
'layername' is the name of the shapefile.
'dtypes' is an Orderdict containing the dtypes for each field.
'gtype' is the geometry type.
'epsg' is the EPSG code of the output.
"""
schema = {'geometry': gtype, 'properties': dtypes}
with fiona.collection(
folder + '/' + layername + '.shp',
'w',
driver='ESRI Shapefile',
crs=crs.from_epsg(epsg),
schema=schema
) as shpfile:
for index, row in df.iterrows():
if row['geom'] != 'POINT EMPTY':
geometry = loads(row['geom'])
props = {}
for prop in dtypes:
props[prop] = row[prop]
shpfile.write({'properties': props, 'geometry': mapping(geometry)})
return 'Extracted {layername} shapefile.'.format(layername=layername)
def to_crs(self, crs=None, epsg=None):
"""Transform geometries to a new coordinate reference system
This method will transform all points in all objects. It has
no notion or projecting entire geometries. All segments
joining points are assumed to be lines in the current
projection, not geodesics. Objects crossing the dateline (or
other projection boundary) will have undesirable behavior.
`to_crs` passes the `crs` argument to the `Proj` function from the
`pyproj` library (with the option `preserve_units=True`). It can
therefore accept proj4 projections in any format
supported by `Proj`, including dictionaries, or proj4 strings.
"""
from fiona.crs import from_epsg
if self.crs is None:
raise ValueError('Cannot transform naive geometries. '
'Please set a crs on the object first.')
if crs is None:
try:
crs = from_epsg(epsg)
except TypeError:
raise TypeError('Must set either crs or epsg for output.')
proj_in = pyproj.Proj(self.crs, preserve_units=True)
proj_out = pyproj.Proj(crs, preserve_units=True)
project = partial(pyproj.transform, proj_in, proj_out)
result = self.apply(lambda geom: transform(project, geom))
result.__class__ = GeoSeries
result.crs = crs
result._invalidate_sindex()
return result
def write_sdim(self):
sdim = self.get_sdim(bounds=True)
crs = from_epsg(4326)
schema = {'geometry':'Polygon','properties':{'UID':'int:8'}}
with fiona.open('/tmp/test.shp','w',driver='ESRI Shapefile',crs=crs,schema=schema) as sink:
for ii,poly in enumerate(sdim.geom.polygon.value.flat):
row = {'geometry':mapping(poly),
'properties':{'UID':int(sdim.geom.uid.flatten()[ii])}}
sink.write(row)
def create_plaid_pantry_shp():
""""""
with open(plaid_csv_path) as plaid_csv:
# there are a couple of lines at the top of the csv containing
# information that is not needed
for i in range(2):
next(plaid_csv)
reader = csv.DictReader(plaid_csv)
# create a metadata for shapefile that locations will be written to
features = list()
metadata = {
'crs': crs.from_epsg(2913),
'driver': 'ESRI Shapefile',
'schema': {
'geometry': 'Point',
'properties': OrderedDict(
[(n, 'str') for n in reader.fieldnames if n])
}
}
latlon2ospn = partial(
pyproj.transform,
pyproj.Proj(init='epsg:4326'),
pyproj.Proj(init='epsg:2913', preserve_units=True)
)
addr_template = '{num} {pre} {street}, {city}, {st} {zip}'
for r in reader:
addr_str = addr_template.format(
num=r['Address 1'], pre=r['Address 2'],
street=r['Street'], city=r['City'],
st=r['State'], zip=r['Zip'])
rsp = rlis_geocode(addr_str)
if isinstance(rsp, int):
print 'there seems to a problem in connecting with'
print 'the rlis api halting geoprocessing until this'
print 'is resolved'
exit()
elif rsp:
geom = Point(rsp['ORSP_x'], rsp['ORSP_y'])
else:
rsp = google_geocode(addr_str)
print rsp
geom_wgs84 = Point(rsp['lng'], rsp['lat'])
geom = transform(latlon2ospn, geom_wgs84)
print geom.x, geom.y
feat = {
'geometry': mapping(geom),
'properties': {k: v for k, v in r.items() if k}}
features.append(feat)
with fiona.open(plaid_shp_path, 'w', **metadata) as plaid_shp:
for feat in features:
plaid_shp.write(feat)
def write_geom_dict(dct,path=None):
crs = from_epsg(4326)
driver = 'ESRI Shapefile'
schema = {'properties':{'UGID':'int'},'geometry':dct.values()[0].geom_type}
path = path or os.path.join(mkdtemp(),'out.shp')
with fiona.open(path,'w',driver=driver,crs=crs,schema=schema) as source:
for k,v in dct.iteritems():
rec = {'properties':{'UGID':k},'geometry':mapping(v)}
source.write(rec)
return(path)
def set_projection(self):
from fiona.crs import to_string, from_epsg, from_string
if self.prj is not None:
self.get_proj4()
if self.proj4 is not None:
self.crs = from_string(self.proj4)
elif self.epsg is not None:
self.crs = from_epsg(self.epsg)
else:
pass
def createShp(self, outputfile, coords, epsg_cd=4326, raster_sampling=None):
"""
Exporting random points
to Shapefile format
-----------------------
outputfile : str
coords : ndarray
epsg_cd : int, optional (default: 4326)
raster_sampling: tuple(str, sampling_type), optional (default: None)
Sampling types:
raster_sampling=(rasterfilepath, "gdal")
raster_sampling=(rasterfilepath, "rasterio")
"""
try:
self.logger.info("Exporting sample to Shapefile...")
if isinstance(raster_sampling, tuple):
self.logger.info("Sampling values on rasterfile...")
rst_outfile, rst_smpl_type = raster_sampling[0], raster_sampling[1]
if rst_smpl_type == "rasterio":
smpl_vals = self.__samplePointOnRasterRasterio(rst_outfile, coords)
schema = {'geometry': 'Point',
'properties': {'cod_id': 'int', 'value': 'float' }
}
shp_crs = from_epsg(epsg_cd)
bar = pyprind.ProgBar(len(coords))
with collection(outputfile, "w", driver="ESRI Shapefile",
schema=schema, crs=shp_crs) as output:
for idx, coord in enumerate(coords, 1):
geom = mapping(Point(coord[1], coord[0]))
value = 0
if raster_sampling:
if rst_smpl_type == "gdal":
value = self.__samplePointOnRasterGdal(rst_outfile, coord)
elif rst_smpl_type == "rasterio":
value = float(smpl_vals[idx - 1])
output.write({'properties': {'cod_id': idx, 'value': value},
'geometry': geom
})
bar.update()
self.logger.info("Sample successfully exported to Shapefile...")
except Exception as err:
self.logger.error("Error generating random coordinates sample: {0}".format(err))
def create_shp(filename):
schema = { 'geometry' : 'Point',
'properties' : { 'mesto' : 'str',
'ulice' : 'str',
'cp' : 'str',
'telefon' : 'str',
'e-mail' : 'str' }
}
csob = fiona.open(filename, 'w', driver='ESRI Shapefile', schema=schema,
crs=from_epsg(5514), encoding='utf-8')
return csob
def extract_tile_items(
raster_features, labels, min_x, min_y, tile_width, tile_height
):
"""Extract label items that belong to the tile defined by the minimum
horizontal pixel `min_x` (left tile limit), the minimum vertical pixel
`min_y` (upper tile limit) and the sizes ̀tile_width` and `tile_height`
measured as a pixel amount.
The tile is cropped from the original image raster as follows:
- horizontally, between `min_x` and `min_x+tile_width`
- vertically, between `min_y` and `min_y+tile_height`
This method takes care of original data projection (UTM 37S, Tanzania
area), however this parameter may be changed if similar data on another
projection is used.
Parameters
----------
raster_features : dict
Raw image raster geographical features (`north`, `south`, `east` and
`west` coordinates, `weight` and `height` measured in pixels)
labels : geopandas.GeoDataFrame
Raw image labels, as a set of geometries
min_x : int
Left tile limit, as a horizontal pixel index
min_y : int
Upper tile limit, as a vertical pixel index
tile_width : int
Tile width, measured in pixel
tile_height : int
Tile height, measured in pixel
Returns
-------
geopandas.GeoDataFrame
Set of ground-truth labels contained into the tile, characterized by
their type (complete, unfinished or foundation) and their geometry
"""
area = get_tile_footprint(
raster_features, min_x, min_y, tile_width, tile_height
)
bdf = gpd.GeoDataFrame(
crs=from_epsg(raster_features["srid"]), geometry=[area]
)
reproj_labels = labels.to_crs(epsg=raster_features["srid"])
tile_items = gpd.sjoin(reproj_labels, bdf)
if tile_items.shape[0] == 0:
return tile_items[["condition", "geometry"]]
tile_items = gpd.overlay(tile_items, bdf)
tile_items = tile_items.explode() # Manage MultiPolygons
return tile_items[["condition", "geometry"]]
def get_short_quiet_paths(graph, from_latLon, to_latLon, edge_gdf, node_gdf, nts=[], db_costs={}, remove_geom_prop=False, only_short=False, logging=True):
# get origin & destination nodes
from_xy = geom_utils.get_xy_from_lat_lon(from_latLon)
to_xy = geom_utils.get_xy_from_lat_lon(to_latLon)
# find/create origin and destination nodes
orig_node = get_nearest_node(graph, from_xy, edge_gdf, node_gdf, nts=nts, db_costs=db_costs)
dest_node = get_nearest_node(graph, to_xy, edge_gdf, node_gdf, nts=nts, db_costs=db_costs, orig_node=orig_node)
if (orig_node is None):
print('could not find origin node at', from_latLon)
return None
if (dest_node is None):
print('could not find destination node at', to_latLon)
return None
# get shortest path
path_list = []
shortest_path = get_shortest_path(graph, orig_node['node'], dest_node['node'], weight='length')
if (shortest_path is None):
print('could not find shortest path')
return None
if (only_short == True):
return shortest_path
path_geom_noises = nw.aggregate_path_geoms_attrs(graph, shortest_path, weight='length', noises=True)
path_list.append({**path_geom_noises, **{'id': 'short_p','type': 'short', 'nt': 0}})
# get quiet paths to list
for nt in nts:
noise_cost_attr = 'nc_'+str(nt)
quiet_path = get_shortest_path(graph, orig_node['node'], dest_node['node'], weight=noise_cost_attr)
path_geom_noises = nw.aggregate_path_geoms_attrs(graph, quiet_path, weight=noise_cost_attr, noises=True)
path_list.append({**path_geom_noises, **{'id': 'q_'+str(nt), 'type': 'quiet', 'nt': nt}})
# remove linking edges of the origin / destination nodes
nw.remove_new_node_and_link_edges(graph, orig_node)
nw.remove_new_node_and_link_edges(graph, dest_node)
# collect quiet paths to gdf
paths_gdf = gpd.GeoDataFrame(path_list, crs=from_epsg(3879))
paths_gdf = paths_gdf.drop_duplicates(subset=['type', 'total_length']).sort_values(by=['type', 'total_length'], ascending=[False, True])
# add exposures to noise levels higher than specified threshods (dBs)
paths_gdf['th_noises'] = [exps.get_th_exposures(noises, [55, 60, 65, 70]) for noises in paths_gdf['noises']]
# add percentages of cumulative distances of different noise levels
paths_gdf['noise_pcts'] = paths_gdf.apply(lambda row: exps.get_noise_pcts(row['noises'], row['total_length']), axis=1)
# calculate mean noise level
paths_gdf['mdB'] = paths_gdf.apply(lambda row: exps.get_mean_noise_level(row['noises'], row['total_length']), axis=1)
# calculate noise exposure index (same as noise cost but without noise tolerance coefficient)
paths_gdf['nei'] = [round(exps.get_noise_cost(noises=noises, db_costs=db_costs), 1) for noises in paths_gdf['noises']]
paths_gdf['nei_norm'] = paths_gdf.apply(lambda row: exps.get_nei_norm(row.nei, row.total_length, db_costs), axis=1)
# gdf to dicts
path_dicts = qp.get_geojson_from_q_path_gdf(paths_gdf)
# group paths with nearly identical geometries
unique_paths = qp.remove_duplicate_geom_paths(path_dicts, tolerance=30, remove_geom_prop=remove_geom_prop, logging=False)
# calculate exposure differences to shortest path
path_comps = get_short_quiet_paths_comparison_for_dicts(unique_paths)
# return paths as GeoJSON (FeatureCollection)...
return { 'paths': path_comps, 'shortest_path': shortest_path, 'orig_offset': orig_node['offset'], 'dest_offset': dest_node['offset'] }
def process_night_lights(country):
"""
Clip the nightlights layer to the chosen country boundary and place in
desired country folder.
Parameters
----------
country : string
Three digit ISO country code.
"""
iso3 = country['iso3']
folder = os.path.join(DATA_INTERMEDIATE, iso3)
path_output = os.path.join(folder, 'night_lights.tif')
if os.path.exists(path_output):
return print('Completed processing of nightlight layer')
path_country = os.path.join(folder, 'national_outline.shp')
filename = 'F182013.v4c_web.stable_lights.avg_vis.tif'
path_night_lights = os.path.join(DATA_RAW, 'nightlights', '2013', filename)
country = gpd.read_file(path_country)
bbox = country.envelope
geo = gpd.GeoDataFrame()
geo = gpd.GeoDataFrame({'geometry': bbox}, crs=from_epsg('4326'))
coords = [json.loads(geo.to_json())['features'][0]['geometry']]
night_lights = rasterio.open(path_night_lights, "r+")
night_lights.nodata = 0
out_img, out_transform = mask(night_lights, coords, crop=True)
out_meta = night_lights.meta.copy()
out_meta.update({
"driver": "GTiff",
"height": out_img.shape[1],
"width": out_img.shape[2],
"transform": out_transform,
"crs": 'epsg:4326'
})
with rasterio.open(path_output, "w", **out_meta) as dest:
dest.write(out_img)
return print('Completed processing of night lights layer')
def dist_to_coast(coord_lat, lon=None):
""" Comput distance to coast from input points in meters.
Parameters:
coord_lat (GeoDataFrame or np.array or float):
- GeoDataFrame with geometry column in epsg:4326
- np.array with two columns, first for latitude of each point and
second with longitude in epsg:4326
- np.array with one dimension containing latitudes in epsg:4326
- float with a latitude value in epsg:4326
lon (np.array or float, optional):
- np.array with one dimension containing longitudes in epsg:4326
- float with a longitude value in epsg:4326
Returns:
np.array
"""
if lon is None:
if isinstance(coord_lat, (gpd.GeoDataFrame, gpd.GeoSeries)):
if not equal_crs(coord_lat.crs, NE_CRS):
LOGGER.error('Input CRS is not %s', str(NE_CRS))
raise ValueError
geom = coord_lat
elif isinstance(coord_lat, np.ndarray):
if coord_lat.shape[1] != 2:
LOGGER.error('Missing longitude values.')
raise ValueError
geom = gpd.GeoDataFrame(geometry=list(
map(Point, coord_lat[:, 1], coord_lat[:, 0])),
crs=NE_CRS)
else:
LOGGER.error('Missing longitude values.')
raise ValueError
elif isinstance(lon, np.ndarray):
if coord_lat.size != lon.size:
LOGGER.error('Wrong input coordinates size: %s != %s',
coord_lat.size, lon.size)
raise ValueError
geom = gpd.GeoDataFrame(geometry=list(map(Point, lon, coord_lat)),
crs=NE_CRS)
elif isinstance(lon, float):
if not isinstance(coord_lat, float):
LOGGER.error('Wrong input coordinates values.')
raise ValueError
geom = gpd.GeoDataFrame(geometry=list(map(Point, [lon], [coord_lat])),
crs=NE_CRS)
to_crs = from_epsg(
convert_wgs_to_utm(geom.geometry.iloc[0].x, geom.geometry.iloc[0].y))
coast = get_coastlines(geom.total_bounds, 10).unary_union
coast = gpd.GeoDataFrame(geometry=[coast], crs=NE_CRS).to_crs(to_crs)
return geom.to_crs(to_crs).distance(coast.geometry[0]).values
def __init__(self, df, traj_id, obj_id=None, parent=None):
"""
Create Trajectory from GeoDataFrame.
Parameters
----------
df : GeoDataFrame
GeoDataFrame with point geometry column and timestamp index
traj_id : any
Trajectory ID
obj_id : any
Moving object ID
parent : Trajectory
Parent trajectory
Examples
--------
Creating a trajectory from scratch:
>>> import pandas as pd
>>> import geopandas as gpd
>>> import movingpandas as mpd
>>> from fiona.crs import from_epsg
>>>
>>> df = pd.DataFrame([
... {'geometry':Point(0,0), 't':datetime(2018,1,1,12,0,0)},
... {'geometry':Point(6,0), 't':datetime(2018,1,1,12,6,0)},
... {'geometry':Point(6,6), 't':datetime(2018,1,1,12,10,0)},
... {'geometry':Point(9,9), 't':datetime(2018,1,1,12,15,0)}
... ]).set_index('t')
>>> gdf = gpd.GeoDataFrame(df, crs=from_epsg(31256))
>>> traj = mpd.Trajectory(gdf, 1)
For more examples, see the tutorial notebooks_.
.. _notebooks: https://mybinder.org/v2/gh/anitagraser/movingpandas/binder-tag?filepath=tutorials/0_getting_started.ipynb
"""
if len(df) < 2:
raise ValueError(
"Trajectory dataframe must have at least two rows!")
self.id = traj_id
self.obj_id = obj_id
df.sort_index(inplace=True)
self.df = df[~df.index.duplicated(keep='first')]
self.crs = df.crs
self.parent = parent
try:
crs = CRS.from_user_input(self.crs)
self.is_latlon = crs.is_geographic
except NameError:
self.is_latlon = self.crs['init'] == from_epsg(4326)['init']
def __iter__(self):
""" Returns generator over shapefile rows.
Note:
The first column is an id field, taken from the id value of each shape
The middle values are taken from the property_schema
The last column is a string named geometry, which has the wkt value, the type is geometry_type.
"""
# These imports are nere, not at the module level, so the geo
# support can be an extra
self.start()
vfs, shp_file, layer_index = self._open_file_params()
with fiona.open(shp_file, vfs=vfs, layer=layer_index) as source:
if source.crs.get('init') != 'epsg:4326':
# Project back to WGS84
project = partial(pyproj.transform,
pyproj.Proj(source.crs, preserve_units=True),
pyproj.Proj(from_epsg('4326'))
)
else:
project = None
yield self.headers
for i,s in enumerate(source):
row_data = s['properties']
shp = asShape(s['geometry'])
row = [int(s['id'])]
for col_name, elem in row_data.items():
row.append(elem)
if project:
row.append(transform(project, shp))
else:
row.append(shp)
yield row
self.finish()
def PathMap(sp, df):
# stores lines/roads/edges of sp (shortest path)
listLine = []
for i in range(len(sp) - 1):
# l1 and l2 are row number of each point in data frame
l1 = df[df['Point'] == sp[i]].index.values.astype(int)
l2 = df[df['Point'] == sp[i + 1]].index.values.astype(int)
# from row number we get geometry and form list of line
# listLine.append(LineString([df.iloc[l1[0]].geometry, df.iloc[l2[0]].geometry]))
point1 = df.iloc[l1[0]].Latitude, df.iloc[l1[0]].Longitude
point2 = df.iloc[l2[0]].Latitude, df.iloc[l2[0]].Longitude
listLine.append(LineString([point1, point2]))
# convert line to dataframe then to geo df
dfLine = pd.DataFrame({'geometry': listLine})
gdfLine = geopandas.GeoDataFrame(dfLine)
# get orignal df and change to crs
# this will be helpful to mark intersection on path map that only has line
gdf = geopandas.GeoDataFrame(df,
geometry=geopandas.points_from_xy(
df.Longitude, df.Latitude))
# gdf2 = CRSConverter(gdf)
# gdfLine2 = CRSConverter(gdfLine)
gdf.crs = from_epsg(3857)
gdfLine.crs = from_epsg(3857)
ax = gdfLine.plot(figsize=(10, 10), alpha=1, edgecolor='red')
for a in gdf.itertuples():
if sp.__contains__(a.Point):
plt.text(a.geometry.x, a.geometry.y, a.Point)
# ctx.add_basemap(ax, url=ctx.providers.Stamen.TonerLite, zoom=12)
ax.set_axis_off()
plt.show()
def get_line_polygons_inters_points(line_geom, polygons):
polygons_under_line = get_polygons_under_line(line_geom, polygons)
point_geoms = []
for idx, row in polygons_under_line.iterrows():
poly_geom = row['geometry']
inters_geom = poly_geom.intersection(line_geom)
if (inters_geom.geom_type == 'MultiLineString'):
for inters_line in inters_geom:
point_geoms += get_inters_points(inters_line)
else:
inters_line = inters_geom
point_geoms += get_inters_points(inters_line)
return gpd.GeoDataFrame(geometry=point_geoms, crs=from_epsg(3879))
def set_projection(self):
try:
from fiona.crs import to_string, from_epsg, from_string
except:
print('\nGIS dependencies not installed. Please see readme for instructions on installation')
if self.prj is not None:
self.get_proj4()
if self.proj4 is not None:
self.crs = from_string(self.proj4)
elif self.epsg is not None:
self.crs = from_epsg(self.epsg)
else:
pass
def test_prepare_result_none(self):
p0 = Point(12.3, -45.6) # Treat these as lat/lon
d = {'a': ('address0', p0.coords[0]), 'b': (None, None)}
df = _prepare_geocode_result(d)
assert type(df) is gpd.GeoDataFrame
self.assertEqual(from_epsg(4326), df.crs)
self.assertEqual(len(df), 2)
self.assert_('address' in df)
row = df.loc['b']
self.assertEqual(len(row['geometry'].coords), 0)
self.assert_(pd.np.isnan(row['address']))
def test_split_by_observation_gap_skip_single_points(self):
df = pd.DataFrame([
{'geometry': Point(0, 0), 't': datetime(2018, 1, 1, 12, 0, 0)},
{'geometry': Point(-6, 10), 't': datetime(2018, 1, 1, 12, 1, 0)},
{'geometry': Point(6, 6), 't': datetime(2018, 1, 1, 12, 5, 0)},
{'geometry': Point(6, 16), 't': datetime(2018, 1, 1, 12, 6, 30)}
]).set_index('t')
geo_df = GeoDataFrame(df, crs=from_epsg(31256))
traj = Trajectory(1, geo_df)
split = traj.split_by_observation_gap(timedelta(seconds=61))
result = len(split)
expected_result = 1
self.assertEqual(expected_result, result)
def test_clip_with_no_intersection(self):
polygon = Polygon([(105, -5), (107, -5), (107, 12), (105, 12), (105, -5)])
df = pd.DataFrame([
{'geometry': Point(0, 0), 't': datetime(2018, 1, 1, 12, 0, 0)},
{'geometry': Point(6, 0), 't': datetime(2018, 1, 1, 12, 10, 0)},
{'geometry': Point(10, 0), 't': datetime(2018, 1, 1, 12, 15, 0)},
{'geometry': Point(10, 10), 't': datetime(2018, 1, 1, 12, 30, 0)},
{'geometry': Point(0, 10), 't': datetime(2018, 1, 1, 13, 0, 0)}]).set_index('t')
geo_df = GeoDataFrame(df, crs=from_epsg(31256))
traj = Trajectory(1, geo_df)
result = traj.clip(polygon)
expected_result = []
self.assertEqual(expected_result, result)
def test_prepare_result_none():
p0 = Point(12.3, -45.6) # Treat these as lat/lon
d = {"a": ("address0", p0.coords[0]), "b": (None, None)}
df = _prepare_geocode_result(d)
assert type(df) is GeoDataFrame
assert from_epsg(4326) == df.crs
assert len(df) == 2
assert "address" in df
row = df.loc["b"]
assert len(row["geometry"].coords) == 0
assert np.isnan(row["address"])
def reopen(self):
'''reouvre le fichier s'il aete ferme entre temps'''
crs = from_epsg(int(self.srid))
schema = schema_fiona(self.schema,
liste_attributs=self.liste_att,
l_nom=self.l_max)
self.fichier = fiona.open(self.nom,
'a',
crs=crs,
encoding=self.encoding,
driver=self.driver,
schema=schema,
layer=self.layer)
def test_forward(self):
with mock.patch('geopy.geocoders.googlev3.GoogleV3.geocode',
ForwardMock()) as m:
g = geocode(self.locations, provider='googlev3', timeout=2)
self.assertEqual(len(self.locations), m.call_count)
n = len(self.locations)
self.assertIsInstance(g, gpd.GeoDataFrame)
expected = GeoSeries([Point(float(x) + 0.5, float(x)) for x in range(n)],
crs=from_epsg(4326))
assert_geoseries_equal(expected, g['geometry'])
tm.assert_series_equal(g['address'],
pd.Series(self.locations, name='address'))
def set_projection(self):
try:
from fiona.crs import to_string, from_epsg, from_string
except:
print('\nGIS dependencies not installed. Please see readme for instructions on installation')
if self.prj is not None:
self.get_proj4()
if self.proj4 is not None:
self.crs = from_string(self.proj4)
elif self.epsg is not None:
self.crs = from_epsg(self.epsg)
else:
pass
def test_get_position_with_invalid_method(self):
df = pd.DataFrame([
{'geometry': Point(0, 0), 't': datetime(2018, 1, 1, 12, 0, 0)},
{'geometry': Point(6, 0), 't': datetime(2018, 1, 1, 12, 10, 0)},
{'geometry': Point(10, 0), 't': datetime(2018, 1, 1, 12, 20, 0)}
]).set_index('t')
geo_df = GeoDataFrame(df, crs=from_epsg(31256))
traj = Trajectory(1, geo_df)
try:
result = traj.get_position_at(datetime(2018, 1, 1, 12, 10, 0), method='xxx')
assert False
except ValueError:
assert True
def test_offset_minutes(self):
df = pd.DataFrame([
{'geometry': Point(0, 0), 't': datetime(2018, 1, 1, 12, 0, 0), 'value': 1},
{'geometry': Point(-6, 10), 't': datetime(2018, 1, 1, 12, 1, 0), 'value': 2},
{'geometry': Point(6, 6), 't': datetime(2018, 1, 1, 12, 2, 0), 'value': 3},
{'geometry': Point(6, 12), 't': datetime(2018, 1, 1, 12, 3, 0), 'value': 4},
{'geometry': Point(6, 18), 't': datetime(2018, 1, 1, 12, 4, 0), 'value': 5}
]).set_index('t')
geo_df = GeoDataFrame(df, crs=from_epsg(31256))
traj = Trajectory(1, geo_df)
traj.apply_offset_minutes('value', -2)
self.assertEqual(5, traj.df.iloc[2].value)
self.assertEqual(Point(6, 6), traj.df.iloc[2].geometry)
def get_walkable_network(extent_poly_wgs=None):
# define filter for acquiring walkable street network
cust_filter = '["area"!~"yes"]["highway"!~"trunk_link|motor|proposed|construction|abandoned|platform|raceway"]["foot"!~"no"]["service"!~"private"]["access"!~"private"]'
# query graph
g = ox.graph_from_polygon(extent_poly_wgs, custom_filter=cust_filter)
print('loaded graph of', g.number_of_edges(), 'edges')
# convert graph to undirected graph
g_u = ox.get_undirected(g)
print('converted graph to undirected graph of', g_u.number_of_edges(),
'edges')
# project graph
g_u_proj = ox.project_graph(g_u, from_epsg(3879))
return g_u_proj
def create_points_layer(name, format, coord_sys, fields):
"""Create a new points GIS layer"""
# Create the layer schema using data passed to the function.
this_schema = {'geometry': 'Point', 'properties': fields}
# Create the layer itself.
layer = fiona.open(layer_out,
'w',
crs=from_epsg(coord_sys),
driver=format,
schema=this_schema)
return layer
def test_prepare_result_none(self):
p0 = Point(12.3, -45.6) # Treat these as lat/lon
d = {"a": ("address0", p0.coords[0]), "b": (None, None)}
df = _prepare_geocode_result(d)
assert type(df) is gpd.GeoDataFrame
self.assertEqual(from_epsg(4326), df.crs)
self.assertEqual(len(df), 2)
self.assert_("address" in df)
row = df.loc["b"]
self.assertEqual(len(row["geometry"].coords), 0)
self.assert_(pd.np.isnan(row["address"]))
def convert_csv(self):
newschema = {
'geometry': 'Point',
'properties': {
'text': 'str',
'party': 'str'
}
}
with fiona.open(self.red_shp,
'w',
driver="ESRI Shapefile",
schema=newschema,
crs=from_epsg(4296)) as red:
with fiona.open(self.blue_shp,
'w',
driver="ESRI Shapefile",
schema=newschema,
crs=from_epsg(4296)) as blue:
with open(self.partioned_csv, 'rb') as f:
reader = csv.reader(f) #csv.DictReader(f)
for row in reader:
if row[0] == 'Red':
point = Point(float(row[2]), float(row[3]))
red.write({
'properties': {
'text': row[1],
'party': row[0]
},
'geometry': mapping(point)
})
elif row[0] == 'Blue':
point = Point(float(row[2]), float(row[3]))
blue.write({
'properties': {
'text': row[1],
'party': row[0]
},
'geometry': mapping(point)
})
def test_prepare_result_none():
p0 = Point(12.3, -45.6) # Treat these as lat/lon
d = {'a': ('address0', p0.coords[0]), 'b': (None, None)}
df = _prepare_geocode_result(d)
assert type(df) is GeoDataFrame
assert from_epsg(4326) == df.crs
assert len(df) == 2
assert 'address' in df
row = df.loc['b']
assert len(row['geometry'].coords) == 0
assert np.isnan(row['address'])
def explode_lines_to_split_lines(line_df, uniq_id):
row_accumulator = []
def split_list_to_rows(row):
for line_geom in row['split_lines']:
new_row = row.to_dict()
new_row['geometry'] = line_geom
row_accumulator.append(new_row)
line_df.apply(split_list_to_rows, axis=1)
new_gdf = gpd.GeoDataFrame(row_accumulator, crs=from_epsg(3879))
new_gdf['length'] = [round(geom.length,3) for geom in new_gdf['geometry']]
new_gdf['mid_point'] = [get_line_middle_point(geom) for geom in new_gdf['geometry']]
return new_gdf[[uniq_id, 'geometry', 'length', 'mid_point']]
def test_forward(self):
with mock.patch('geopy.geocoders.googlev3.GoogleV3.geocode',
ForwardMock()) as m:
g = geocode(self.locations, provider='googlev3', timeout=2)
self.assertEqual(len(self.locations), m.call_count)
n = len(self.locations)
self.assertIsInstance(g, gpd.GeoDataFrame)
expected = GeoSeries([Point(float(x) + 0.5, float(x)) for x in range(n)],
crs=from_epsg(4326))
assert_geoseries_equal(expected, g['geometry'])
tm.assert_series_equal(g['address'],
pd.Series(self.locations, name='address'))
def test_read_vector_pass(self):
""" Test one columns data """
shp_file = shapereader.natural_earth(resolution='110m', \
category='cultural', name='populated_places_simple')
lat, lon, geometry, intensity = read_vector(shp_file,
['pop_min', 'pop_max'])
self.assertEqual(geometry.crs, from_epsg(NE_EPSG))
self.assertEqual(geometry.size, lat.size)
self.assertEqual(geometry.crs, from_epsg(NE_EPSG))
self.assertAlmostEqual(lon[0], 12.453386544971766)
self.assertAlmostEqual(lon[-1], 114.18306345846304)
self.assertAlmostEqual(lat[0], 41.903282179960115)
self.assertAlmostEqual(lat[-1], 22.30692675357551)
self.assertEqual(intensity.shape, (2, 243))
# population min
self.assertEqual(intensity[0, 0], 832)
self.assertEqual(intensity[0, -1], 4551579)
# population max
self.assertEqual(intensity[1, 0], 832)
self.assertEqual(intensity[1, -1], 7206000)
def main():
#Calculate zonal statistics.
z_stats = zonal_stats(zones_in,vrt, stats=statistics)
#Add the results to original shape file and save as new shape file
results = gpd.read_file(zones_in)
for index, row in results.iterrows():
for stat in statistics:
results.loc[index, stat] = z_stats[index][stat]
results.crs=from_epsg(3067)
results.to_file(zones_out)
def test_reverse(self):
with mock.patch('geopy.geocoders.googlev3.GoogleV3.reverse',
ReverseMock()) as m:
g = reverse_geocode(self.points, provider='googlev3', timeout=2)
self.assertEqual(len(self.points), m.call_count)
self.assertIsInstance(g, gpd.GeoDataFrame)
expected = GeoSeries(self.points, crs=from_epsg(4326))
assert_geoseries_equal(expected, g['geometry'])
address = pd.Series(['address' + str(x) for x in range(len(self.points))],
name='address')
tm.assert_series_equal(g['address'], address)
def test_reverse(self):
with mock.patch('geopy.geocoders.googlev3.GoogleV3.reverse',
ReverseMock()) as m:
g = reverse_geocode(self.points, provider='googlev3', timeout=2)
self.assertEqual(len(self.points), m.call_count)
self.assertIsInstance(g, gpd.GeoDataFrame)
expected = GeoSeries(self.points, crs=from_epsg(4326))
assert_geoseries_equal(expected, g['geometry'])
tm.assert_series_equal(
g['address'],
pd.Series('address' + str(x) for x in range(len(self.points))))
def test_add_heading(self):
df = pd.DataFrame([
{'geometry': Point(0, 0), 't': datetime(2018, 1, 1, 12, 0, 0)},
{'geometry': Point(6, 0), 't': datetime(2018, 1, 1, 12, 10, 0)},
{'geometry': Point(6, -6), 't': datetime(2018, 1, 1, 12, 20, 0)},
{'geometry': Point(-6, -6), 't': datetime(2018, 1, 1, 12, 30, 0)}
]).set_index('t')
geo_df = GeoDataFrame(df, crs=from_epsg(31256))
traj = Trajectory(1, geo_df)
traj.add_direction()
result = traj.df[DIRECTION_COL_NAME].tolist()
expected_result = [90.0, 90.0, 180.0, 270]
self.assertEqual(expected_result, result)
def projectShapes(features, toCRS):
import pyproj
from functools import partial
import fiona.crs as fcrs
from shapely.geometry import shape, mapping
from shapely.ops import transform as shpTrans
project = partial(pyproj.transform, pyproj.Proj(fcrs.from_epsg(4326)),
pyproj.Proj(toCRS))
return list(
{'geometry': mapping(shpTrans(project, shape(feat['geometry'])))}
for feat in features)
def test_split_by_daybreak_same_day_of_year(self):
df = pd.DataFrame([
{'geometry': Point(0, 0), 't': datetime(2018, 1, 1, 12, 0, 0)},
{'geometry': Point(-6, 10), 't': datetime(2018, 1, 1, 12, 1, 0)},
{'geometry': Point(6, 6), 't': datetime(2019, 1, 1, 12, 0, 1)},
{'geometry': Point(6, 16), 't': datetime(2019, 1, 1, 12, 5, 1)}
]).set_index('t')
geo_df = GeoDataFrame(df, crs=from_epsg(31256))
traj = Trajectory(1, geo_df)
split = traj.split_by_date()
result = len(split)
expected_result = 2
self.assertEqual(expected_result, result)
def create_shapefile(fname, features, epsg=4326):
schema = {
'geometry': 'LineString',
'properties': {
'id': 'int',
'source': 'str:24',
}
}
# TODO - get epsg from geojson
crs = from_epsg(epsg)
with fiona.open(fname, 'w', 'ESRI Shapefile', schema, crs=crs) as output:
# ptypes = {k: fiona.prop_type(v) for k, v in output.schema['properties'].items()}
output.writerecords(features)
def convert_geodata_to_gis(net,
epsg=31467,
bus_geodata=True,
line_geodata=True):
if bus_geodata:
g = net.bus_geodata
geo = [Point(x, y) for x, y in g[["x", "y"]].values]
net.bus_geodata = GeoDataFrame(g,
crs=from_epsg(epsg),
geometry=geo,
index=g.index)
if line_geodata:
l = net.line_geodata
geo = GeoSeries(
[LineString(x) for x in net.line_geodata.coords.values],
index=net.line_geodata.index,
crs=from_epsg(epsg))
net.line_geodata = GeoDataFrame(l,
crs=from_epsg(epsg),
geometry=geo,
index=l.index)
net["gis_epsg_code"] = epsg
