def test_aci1():
import math
import psi4
import forte
from forte import forte_options
ref_aci = -75.010199198896
rel_tol = 1e-9
abs_tol = 1e-8
h2o = psi4.geometry("""
O
H 1 0.96
H 1 0.96 2 104.5
""")
psi4.set_options({'basis': "sto-3g"})
E_scf, wfn = psi4.energy('scf', return_wfn=True)
state = forte.StateInfo(na=5, nb=5, multiplicity=1, twice_ms=0, irrep=0)
dim = psi4.core.Dimension([4, 0, 1, 2])
options = psi4.core.get_options()
options.set_current_module('FORTE')
forte_options.update_psi_options(options)
forte.startup()
forte.banner()
mo_space_info = forte.make_mo_space_info(wfn, forte_options)
ints = forte.make_forte_integrals(wfn, options, mo_space_info)
scf_info = forte.SCFInfo(wfn)
solver = forte.make_active_space_solver('ACI', state, scf_info,
mo_space_info, ints, forte_options)
energy = solver.compute_energy()
assert math.isclose(energy, ref_aci, abs_tol=abs_tol, rel_tol=rel_tol)
print("\n\nACI Energy = {}".format(energy))
forte.cleanup()
def test_aci1():
import math
import psi4
import forte
from forte import forte_options
ref_aci = -75.010199198896
rel_tol = 1e-9
abs_tol = 1e-8
h2o = psi4.geometry("""
O
H 1 0.96
H 1 0.96 2 104.5
""")
psi4.set_options({'basis': "sto-3g"})
E_scf, wfn = psi4.energy('scf', return_wfn=True)
state = forte.StateInfo(na=5, nb=5, multiplicity=1, twice_ms=0, irrep=0)
dim = psi4.core.Dimension([4, 0, 1, 2])
options = psi4.core.get_options()
options.set_current_module('FORTE')
forte_options.update_psi_options(options)
forte.startup()
forte.banner()
mo_space_info = forte.make_mo_space_info(wfn, forte_options)
ints = forte.make_forte_integrals(wfn, options, mo_space_info)
scf_info = forte.SCFInfo(wfn)
solver = forte.make_active_space_solver('ACI',state,scf_info,mo_space_info, ints, forte_options)
energy = solver.compute_energy()
assert math.isclose(energy,ref_aci,abs_tol=abs_tol, rel_tol=rel_tol)
print("\n\nACI Energy = {}".format(energy))
forte.cleanup()
def prepare_forte_objects(wfn):
"""
Take a psi4 wavefunction object and prepare the ForteIntegrals, SCFInfo, and MOSpaceInfo objects
Parameters
----------
wfn : psi4Wavefunction
A psi4 Wavefunction object
Returns
-------
tuple(ForteIntegrals, SCFInfo, MOSpaceInfo)
a tuple containing the ForteIntegrals, SCFInfo, and MOSpaceInfo objects
"""
# fill in the options object
psi4_options = psi4.core.get_options()
psi4_options.set_current_module('FORTE')
options = forte.forte_options
options.get_options_from_psi4(psi4_options)
if ('DF' in options.get_str('INT_TYPE')):
aux_basis = psi4.core.BasisSet.build(
wfn.molecule(), 'DF_BASIS_MP2',
psi4.core.get_global_option('DF_BASIS_MP2'), 'RIFIT',
psi4.core.get_global_option('BASIS'))
wfn.set_basisset('DF_BASIS_MP2', aux_basis)
if (options.get_str('MINAO_BASIS')):
minao_basis = psi4.core.BasisSet.build(
wfn.molecule(), 'MINAO_BASIS', psi4_options.get_str('MINAO_BASIS'))
wfn.set_basisset('MINAO_BASIS', minao_basis)
# Prepare base objects
scf_info = forte.SCFInfo(wfn)
mo_space_info = forte.make_mo_space_info(wfn, options)
ints = forte.make_forte_integrals(wfn, options, mo_space_info)
return (ints, scf_info, mo_space_info)
def run_forte(name, **kwargs):
r"""Function encoding sequence of PSI module and plugin calls so that
forte can be called via :py:func:`~driver.energy`. For post-scf plugins.
>>> energy('forte')
"""
lowername = name.lower()
kwargs = p4util.kwargs_lower(kwargs)
# Compute a SCF reference, a wavefunction is return which holds the molecule used, orbitals
# Fock matrices, and more
ref_wfn = kwargs.get('ref_wfn', None)
if ref_wfn is None:
ref_wfn = psi4.driver.scf_helper(name, **kwargs)
# Get the option object
options = psi4.core.get_options()
options.set_current_module('FORTE')
forte.forte_options.update_psi_options(options)
if ('DF' in options.get_str('INT_TYPE')):
aux_basis = psi4.core.BasisSet.build(
ref_wfn.molecule(), 'DF_BASIS_MP2',
psi4.core.get_global_option('DF_BASIS_MP2'), 'RIFIT',
psi4.core.get_global_option('BASIS'))
ref_wfn.set_basisset('DF_BASIS_MP2', aux_basis)
if (options.get_str('MINAO_BASIS')):
minao_basis = psi4.core.BasisSet.build(ref_wfn.molecule(),
'MINAO_BASIS',
options.get_str('MINAO_BASIS'))
ref_wfn.set_basisset('MINAO_BASIS', minao_basis)
# Start Forte, initialize ambit
my_proc_n_nodes = forte.startup()
my_proc, n_nodes = my_proc_n_nodes
# Print the banner
forte.banner()
# Create the MOSpaceInfo object
mo_space_info = forte.make_mo_space_info(ref_wfn, forte.forte_options)
# Create the AO subspace projector
ps = forte.make_aosubspace_projector(ref_wfn, options)
state = forte.make_state_info_from_psi_wfn(ref_wfn)
scf_info = forte.SCFInfo(ref_wfn)
state_weights_map = forte.make_state_weights_map(forte.forte_options,
ref_wfn)
# Run a method
job_type = options.get_str('JOB_TYPE')
energy = 0.0
if job_type != 'NONE':
start = timeit.timeit()
# Make an integral object
ints = forte.make_forte_integrals(ref_wfn, options, mo_space_info)
# Rotate orbitals before computation
orb_type = options.get_str("ORBITAL_TYPE")
if orb_type != 'CANONICAL':
orb_t = forte.make_orbital_transformation(orb_type, scf_info,
forte.forte_options,
ints, mo_space_info)
orb_t.compute_transformation()
Ua = orb_t.get_Ua()
Ub = orb_t.get_Ub()
ints.rotate_orbitals(Ua, Ub)
# Run a method
if (job_type == 'NEWDRIVER'):
energy = forte_driver(state_weights_map, scf_info,
forte.forte_options, ints, mo_space_info)
else:
energy = forte.forte_old_methods(ref_wfn, options, ints,
mo_space_info)
end = timeit.timeit()
#print('\n\n Your calculation took ', (end - start), ' seconds');
# Close ambit, etc.
forte.cleanup()
psi4.core.set_scalar_variable('CURRENT ENERGY', energy)
return ref_wfn
def gradient_forte(name, **kwargs):
r"""Function encoding sequence of PSI module and plugin calls so that
forte can be called via :py:func:`~driver.energy`. For post-scf plugins.
>>> gradient('forte')
available for : CASSCF
"""
lowername = name.lower()
kwargs = p4util.kwargs_lower(kwargs)
# Compute a SCF reference, a wavefunction is return which holds the molecule used, orbitals
# Fock matrices, and more
ref_wfn = kwargs.get('ref_wfn', None)
if ref_wfn is None:
ref_wfn = psi4.driver.scf_helper(name, **kwargs)
# Get the psi4 option object
optstash = p4util.OptionsState(['GLOBALS', 'DERTYPE'])
psi4_options = psi4.core.get_options()
psi4_options.set_current_module('FORTE')
# Get the forte option object
options = forte.forte_options
options.get_options_from_psi4(psi4_options)
if ('DF' in options.get_str('INT_TYPE')):
raise Exception('analytic gradient is not implemented for density fitting')
if (options.get_str('MINAO_BASIS')):
minao_basis = psi4.core.BasisSet.build(ref_wfn.molecule(), 'MINAO_BASIS',
options.get_str('MINAO_BASIS'))
ref_wfn.set_basisset('MINAO_BASIS', minao_basis)
# Start Forte, initialize ambit
my_proc_n_nodes = forte.startup()
my_proc, n_nodes = my_proc_n_nodes
# Print the banner
forte.banner()
# Create the MOSpaceInfo object
mo_space_info = forte.make_mo_space_info(ref_wfn, options)
# Call methods that project the orbitals (AVAS, embedding)
mo_space_info = orbital_projection(ref_wfn, options, mo_space_info)
state = forte.make_state_info_from_psi_wfn(ref_wfn)
scf_info = forte.SCFInfo(ref_wfn)
state_weights_map = forte.make_state_weights_map(options,ref_wfn)
# Run a method
job_type = options.get_str('JOB_TYPE')
energy = 0.0
if not job_type == 'CASSCF':
raise Exception('analytic gradient is only implemented for CASSCF')
start = time.time()
# Make an integral object
ints = forte.make_forte_integrals(ref_wfn, options, mo_space_info)
# Rotate orbitals before computation
orb_type = options.get_str("ORBITAL_TYPE")
if orb_type != 'CANONICAL':
orb_t = forte.make_orbital_transformation(orb_type, scf_info, options, ints, mo_space_info)
orb_t.compute_transformation()
Ua = orb_t.get_Ua()
Ub = orb_t.get_Ub()
ints.rotate_orbitals(Ua,Ub)
# Run gradient computation
energy = forte.forte_old_methods(ref_wfn, options, ints, mo_space_info)
derivobj = psi4.core.Deriv(ref_wfn)
derivobj.set_deriv_density_backtransformed(True)
derivobj.set_ignore_reference(True)
grad = derivobj.compute() #psi4.core.DerivCalcType.Correlated
ref_wfn.set_gradient(grad)
optstash.restore()
end = time.time()
#print('\n\n Your calculation took ', (end - start), ' seconds');
# Close ambit, etc.
forte.cleanup()
return ref_wfn
def run_forte(name, **kwargs):
r"""Function encoding sequence of PSI module and plugin calls so that
forte can be called via :py:func:`~driver.energy`. For post-scf plugins.
>>> energy('forte')
"""
lowername = name.lower()
kwargs = p4util.kwargs_lower(kwargs)
# Compute a SCF reference, a wavefunction is return which holds the molecule used, orbitals
# Fock matrices, and more
ref_wfn = kwargs.get('ref_wfn', None)
if ref_wfn is None:
ref_wfn = psi4.driver.scf_helper(name, **kwargs)
# Get the option object
psi4_options = psi4.core.get_options()
psi4_options.set_current_module('FORTE')
# Get the forte option object
options = forte.forte_options
options.get_options_from_psi4(psi4_options)
if ('DF' in options.get_str('INT_TYPE')):
aux_basis = psi4.core.BasisSet.build(ref_wfn.molecule(), 'DF_BASIS_MP2',
options.get_str('DF_BASIS_MP2'),
'RIFIT', options.get_str('BASIS'))
ref_wfn.set_basisset('DF_BASIS_MP2', aux_basis)
if (options.get_str('MINAO_BASIS')):
minao_basis = psi4.core.BasisSet.build(ref_wfn.molecule(), 'MINAO_BASIS',
options.get_str('MINAO_BASIS'))
ref_wfn.set_basisset('MINAO_BASIS', minao_basis)
# Start Forte, initialize ambit
my_proc_n_nodes = forte.startup()
my_proc, n_nodes = my_proc_n_nodes
# Print the banner
forte.banner()
# Create the MOSpaceInfo object
mo_space_info = forte.make_mo_space_info(ref_wfn, options)
# Call methods that project the orbitals (AVAS, embedding)
mo_space_info = orbital_projection(ref_wfn, options, mo_space_info)
# Averaging spin multiplets if doing spin-adapted computation
if options.get_str('CORRELATION_SOLVER') == 'SA-MRDSRG':
options_dict = options.dict()
options_dict['SPIN_AVG_DENSITY']['value'] = True
options.set_dict(options_dict)
state = forte.make_state_info_from_psi_wfn(ref_wfn)
scf_info = forte.SCFInfo(ref_wfn)
state_weights_map = forte.make_state_weights_map(options,ref_wfn)
# Run a method
job_type = options.get_str('JOB_TYPE')
energy = 0.0
if job_type == 'NONE':
forte.cleanup()
return ref_wfn
start_pre_ints = time.time()
# Make an integral object
ints = forte.make_forte_integrals(ref_wfn, options, mo_space_info)
start = time.time()
# Rotate orbitals before computation (e.g. localization, MP2 natural orbitals, etc.)
orb_type = options.get_str("ORBITAL_TYPE")
if orb_type != 'CANONICAL':
orb_t = forte.make_orbital_transformation(orb_type, scf_info, options, ints, mo_space_info)
orb_t.compute_transformation()
Ua = orb_t.get_Ua()
Ub = orb_t.get_Ub()
ints.rotate_orbitals(Ua,Ub)
# Run a method
if (job_type == 'NEWDRIVER'):
energy = forte_driver(state_weights_map, scf_info, options, ints, mo_space_info)
else:
energy = forte.forte_old_methods(ref_wfn, options, ints, mo_space_info)
end = time.time()
# Close ambit, etc.
forte.cleanup()
psi4.core.set_scalar_variable('CURRENT ENERGY', energy)
psi4.core.print_out(f'\n\n Time to prepare integrals: {start - start_pre_ints:12.3f} seconds')
psi4.core.print_out(f'\n Time to run job : {end - start:12.3f} seconds')
psi4.core.print_out(f'\n Total : {end - start:12.3f} seconds')
return ref_wfn
def test_sparse_ci():
import math
import psi4
import forte
import itertools
import numpy as np
import pytest
from forte import forte_options
ref_fci = -5.623851783330647
psi4.core.clean()
h2o = psi4.geometry("""
He
He 1 1.0
""")
psi4.set_options({'basis': 'cc-pVDZ'})
E_scf, wfn = psi4.energy('scf', return_wfn=True)
na = wfn.nalpha()
nb = wfn.nbeta()
nirrep = wfn.nirrep()
wfn_symmetry = 0
forte.startup()
forte.banner()
psi4_options = psi4.core.get_options()
psi4_options.set_current_module('FORTE')
forte_options.get_options_from_psi4(psi4_options)
# Setup forte and prepare the active space integral class
mo_space_info = forte.make_mo_space_info(wfn, forte_options)
ints = forte.make_forte_integrals(wfn, forte_options, mo_space_info)
as_ints = forte.make_active_space_ints(mo_space_info, ints, 'ACTIVE',
['RESTRICTED_DOCC'])
print('\n\n => Sparse FCI Test <=')
print(' Number of irreps: {}'.format(nirrep))
nmo = wfn.nmo()
nmopi = [wfn.nmopi()[h] for h in range(nirrep)]
nmopi_str = [str(wfn.nmopi()[h]) for h in range(nirrep)]
mo_sym = []
for h in range(nirrep):
for i in range(nmopi[h]):
mo_sym.append(h)
print(' Number of orbitals per irreps: [{}]'.format(','.join(nmopi_str)))
print(' Symmetry of the MOs: ', mo_sym)
hf_reference = forte.Determinant()
hf_reference.create_alfa_bit(0)
hf_reference.create_beta_bit(0)
print(' Hartree-Fock determinant: {}'.format(hf_reference.str(10)))
# Compute the HF energy
hf_energy = as_ints.nuclear_repulsion_energy() + as_ints.slater_rules(
hf_reference, hf_reference)
print(' Nuclear repulsion energy: {}'.format(
as_ints.nuclear_repulsion_energy()))
print(' Reference energy: {}'.format(hf_energy))
# Build a list of determinants
orblist = [i for i in range(nmo)]
dets = []
for astr in itertools.combinations(orblist, na):
for bstr in itertools.combinations(orblist, nb):
sym = 0
d = forte.Determinant()
for a in astr:
d.create_alfa_bit(a)
sym = sym ^ mo_sym[a]
for b in bstr:
d.create_beta_bit(b)
sym = sym ^ mo_sym[b]
if (sym == wfn_symmetry):
dets.append(d)
print(' Determinant {} has symmetry {}'.format(
d.str(nmo), sym))
print(f'\n Size of the derminant basis: {len(dets)}')
energy, evals, evecs, spin = forte.diag(dets, as_ints, 1, 1, "FULL")
efci = energy[0] + as_ints.nuclear_repulsion_energy()
print('\n FCI Energy: {}\n'.format(efci))
assert efci == pytest.approx(ref_fci, abs=1e-9)
# Clean up forte (necessary)
forte.cleanup()
def test_sparse_ci():
import math
import psi4
import forte
import itertools
import numpy as np
import pytest
from forte import forte_options
ref_fci = -1.101150330132956
psi4.core.clean()
h2o = psi4.geometry("""
H
H 1 1.0
""")
psi4.set_options({'basis': 'sto-3g'})
E_scf, wfn = psi4.energy('scf', return_wfn=True)
na = wfn.nalpha()
nb = wfn.nbeta()
nirrep = wfn.nirrep()
wfn_symmetry = 0
forte.startup()
forte.banner()
psi4_options = psi4.core.get_options()
psi4_options.set_current_module('FORTE')
forte_options.get_options_from_psi4(psi4_options)
# Setup forte and prepare the active space integral class
mo_space_info = forte.make_mo_space_info(wfn, forte_options)
ints = forte.make_forte_integrals(wfn, forte_options, mo_space_info)
as_ints = forte.make_active_space_ints(mo_space_info, ints, 'ACTIVE',
['RESTRICTED_DOCC'])
as_ints.print()
print('\n\n => Sparse FCI Test <=')
print(' Number of irreps: {}'.format(nirrep))
nmo = wfn.nmo()
nmopi = [wfn.nmopi()[h] for h in range(nirrep)]
nmopi_str = [str(wfn.nmopi()[h]) for h in range(nirrep)]
mo_sym = []
for h in range(nirrep):
for i in range(nmopi[h]):
mo_sym.append(h)
print(' Number of orbitals per irreps: [{}]'.format(','.join(nmopi_str)))
print(' Symmetry of the MOs: ', mo_sym)
hf_reference = forte.Determinant()
hf_reference.create_alfa_bit(0)
hf_reference.create_beta_bit(0)
print(' Hartree-Fock determinant: {}'.format(hf_reference.str(2)))
# Compute the HF energy
hf_energy = as_ints.nuclear_repulsion_energy() + as_ints.slater_rules(
hf_reference, hf_reference)
print(' Nuclear repulsion energy: {}'.format(
as_ints.nuclear_repulsion_energy()))
print(' Reference energy: {}'.format(hf_energy))
# Build a list of determinants
orblist = [i for i in range(nmo)]
dets = []
for astr in itertools.combinations(orblist, na):
for bstr in itertools.combinations(orblist, nb):
sym = 0
d = forte.Determinant()
for a in astr:
d.create_alfa_bit(a)
sym = sym ^ mo_sym[a]
for b in bstr:
d.create_beta_bit(b)
sym = sym ^ mo_sym[b]
if (sym == wfn_symmetry):
dets.append(d)
print(' Determinant {} has symmetry {}'.format(
d.str(nmo), sym))
# Build the Hamiltonian matrix using 'slater_rules'
nfci = len(dets)
H = np.ndarray((nfci, nfci))
for I in range(nfci):
# off-diagonal terms
for J in range(I + 1, nfci):
HIJ = as_ints.slater_rules(dets[I], dets[J])
H[I][J] = H[J][I] = HIJ
# diagonal term
H[I][I] = as_ints.nuclear_repulsion_energy() + as_ints.slater_rules(
dets[I], dets[I])
# Find the lowest eigenvalue
efci = np.linalg.eigh(H)[0][0]
print('\n FCI Energy: {}\n'.format(efci))
assert efci == pytest.approx(ref_fci, 1.0e-9)
# Clean up forte (necessary)
forte.cleanup()
def run_forte(name, **kwargs):
r"""Function encoding sequence of PSI module and plugin calls so that
forte can be called via :py:func:`~driver.energy`. For post-scf plugins.
>>> energy('forte')
"""
lowername = name.lower()
kwargs = p4util.kwargs_lower(kwargs)
# Compute a SCF reference, a wavefunction is return which holds the molecule used, orbitals
# Fock matrices, and more
ref_wfn = kwargs.get('ref_wfn', None)
if ref_wfn is None:
ref_wfn = psi4.driver.scf_helper(name, **kwargs)
# Get the option object
options = psi4.core.get_options()
options.set_current_module('FORTE')
forte.forte_options.update_psi_options(options)
if ('DF' in options.get_str('INT_TYPE')):
aux_basis = psi4.core.BasisSet.build(ref_wfn.molecule(), 'DF_BASIS_MP2',
psi4.core.get_global_option('DF_BASIS_MP2'),
'RIFIT', psi4.core.get_global_option('BASIS'))
ref_wfn.set_basisset('DF_BASIS_MP2', aux_basis)
if (options.get_str('MINAO_BASIS')):
minao_basis = psi4.core.BasisSet.build(ref_wfn.molecule(), 'MINAO_BASIS',
options.get_str('MINAO_BASIS'))
ref_wfn.set_basisset('MINAO_BASIS', minao_basis)
# Start Forte, initialize ambit
my_proc_n_nodes = forte.startup()
my_proc, n_nodes = my_proc_n_nodes
# Print the banner
forte.banner()
# Create the MOSpaceInfo object
mo_space_info = forte.make_mo_space_info(ref_wfn, forte.forte_options)
# Call methods that project the orbitals (AVAS, embedding)
orbital_projection(ref_wfn, options)
state = forte.make_state_info_from_psi_wfn(ref_wfn)
scf_info = forte.SCFInfo(ref_wfn)
state_weights_map = forte.make_state_weights_map(forte.forte_options,ref_wfn)
# Run a method
job_type = options.get_str('JOB_TYPE')
energy = 0.0
if job_type == 'NONE':
forte.cleanup()
return ref_wfn
start = timeit.timeit()
# Make an integral object
ints = forte.make_forte_integrals(ref_wfn, options, mo_space_info)
# Rotate orbitals before computation
orb_type = options.get_str("ORBITAL_TYPE")
if orb_type != 'CANONICAL':
orb_t = forte.make_orbital_transformation(orb_type, scf_info, forte.forte_options, ints, mo_space_info)
orb_t.compute_transformation()
Ua = orb_t.get_Ua()
Ub = orb_t.get_Ub()
ints.rotate_orbitals(Ua,Ub)
# Run a method
if (job_type == 'NEWDRIVER'):
energy = forte_driver(state_weights_map, scf_info, forte.forte_options, ints, mo_space_info)
else:
energy = forte.forte_old_methods(ref_wfn, options, ints, mo_space_info)
end = timeit.timeit()
#print('\n\n Your calculation took ', (end - start), ' seconds');
# Close ambit, etc.
forte.cleanup()
psi4.core.set_scalar_variable('CURRENT ENERGY', energy)
return ref_wfn