def save_checkpoint(checkpoint_folder, state, checkpoint_file=CHECKPOINT_FILE):
"""
Saves a state variable to the specified checkpoint folder. Returns filename
of checkpoint if successful, and False otherwise.
"""
# make sure that we have a checkpoint folder:
if not PathManager.isdir(checkpoint_folder):
try:
PathManager.mkdirs(checkpoint_folder)
except BaseException:
logging.warning("Could not create folder %s." % checkpoint_folder,
exc_info=True)
if not PathManager.isdir(checkpoint_folder):
return False
# write checkpoint atomically:
try:
full_filename = f"{checkpoint_folder}/{checkpoint_file}"
with PathManager.open(full_filename, "wb") as f:
torch.save(state, f)
return full_filename
except BaseException:
logging.warning("Did not write checkpoint to %s." % checkpoint_folder,
exc_info=True)
return False
def test_bad_args(self) -> None:
with self.assertRaises(NotImplementedError):
PathManager.copy(
self._remote_uri,
self._remote_uri,
foo="foo" # type: ignore
)
with self.assertRaises(NotImplementedError):
PathManager.exists(self._remote_uri, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.get_local_path(
self._remote_uri,
foo="foo" # type: ignore
)
with self.assertRaises(NotImplementedError):
PathManager.isdir(self._remote_uri, foo="foo") # type: ignore
with self.assertRaises(NotImplementedError):
PathManager.isfile(self._remote_uri, foo="foo") # type: ignore
with self.assertRaises(NotImplementedError):
PathManager.ls(self._remote_uri, foo="foo") # type: ignore
with self.assertRaises(NotImplementedError):
PathManager.mkdirs(self._remote_uri, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.open(self._remote_uri, foo="foo") # type: ignore
with self.assertRaises(NotImplementedError):
PathManager.rm(self._remote_uri, foo="foo") # type: ignore
PathManager.set_strict_kwargs_checking(False)
PathManager.get_local_path(self._remote_uri, foo="foo") # type: ignore
f = PathManager.open(self._remote_uri, foo="foo") # type: ignore
f.close()
PathManager.set_strict_kwargs_checking(True)
def test_isdir(self):
self.assertTrue(PathManager.isdir(self._tmpdir))
# This is a file, not a directory, so it should fail
self.assertFalse(PathManager.isdir(self._tmpfile))
# This is a non-existing path, so it should fail
fake_path = os.path.join(self._tmpdir, uuid.uuid4().hex)
self.assertFalse(PathManager.isdir(fake_path))
def get_local_path(input_file, dest_dir):
"""
If user specified copying data to a local directory,
get the local path where the data files were copied.
- If input_file is just a file, we return the dest_dir/filename
- If the intput_file is a directory, then we check if the
environemt is SLURM and use slurm_dir or otherwise dest_dir
to look up copy_complete file is available.
If available, we return the directory.
- If both above fail, we return the input_file as is.
"""
out = ""
if PathManager.isfile(input_file):
out = os.path.join(dest_dir, os.path.basename(input_file))
elif PathManager.isdir(input_file):
data_name = input_file.strip("/").split("/")[-1]
if "SLURM_JOBID" in os.environ:
dest_dir = get_slurm_dir(dest_dir)
dest_dir = os.path.join(dest_dir, data_name)
complete_flag = os.path.join(dest_dir, "copy_complete")
if PathManager.isfile(complete_flag):
out = dest_dir
if PathManager.exists(out):
return out
else:
return input_file
def __init__(self, cfg, data_source, path, split, dataset_name):
super(DiskImageDataset, self).__init__(
queue_size=cfg["DATA"][split]["BATCHSIZE_PER_REPLICA"])
assert data_source in [
"disk_filelist",
"disk_folder",
], "data_source must be either disk_filelist or disk_folder"
if data_source == "disk_filelist":
assert PathManager.isfile(path), f"File {path} does not exist"
elif data_source == "disk_folder":
assert PathManager.isdir(path), f"Directory {path} does not exist"
self.cfg = cfg
self.split = split
self.dataset_name = dataset_name
self.data_source = data_source
self._path = path
self.image_dataset = []
self.is_initialized = False
self._load_data(path)
self._num_samples = len(self.image_dataset)
if self.data_source == "disk_filelist":
# Set dataset to null so that workers dont need to pickle this file.
# This saves memory when disk_filelist is large, especially when memory mapping.
self.image_dataset = []
# whether to use QueueDataset class to handle invalid images or not
self.enable_queue_dataset = cfg["DATA"][
self.split]["ENABLE_QUEUE_DATASET"]
def copy_data(input_file, destination_dir, num_threads, tmp_destination_dir):
"""
Copy data from one source to the other using num_threads. The data to copy
can be a single file or a directory. We check what type of data and
call the relevant functions.
Returns:
output_file (str): the new path of the data (could be file or dir)
destination_dir (str): the destination dir that was actually used
"""
# return whatever the input is: whether "", None or anything else.
logging.info(f"Creating directory: {destination_dir}")
if not (destination_dir is None or destination_dir == ""):
makedir(destination_dir)
else:
destination_dir = None
if PathManager.isfile(input_file):
output_file, output_dir = copy_file(input_file, destination_dir,
tmp_destination_dir)
elif PathManager.isdir(input_file):
output_file, output_dir = copy_dir(input_file, destination_dir,
num_threads)
else:
raise RuntimeError("The input_file is neither a file nor a directory")
return output_file, output_dir
def test_bad_args(self) -> None:
# TODO (T58240718): Replace with dynamic checks
with self.assertRaises(ValueError):
PathManager.copy(
self._tmpfile,
self._tmpfile,
foo="foo" # type: ignore
)
with self.assertRaises(ValueError):
PathManager.exists(self._tmpfile, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.get_local_path(self._tmpfile,
foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.isdir(self._tmpfile, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.isfile(self._tmpfile, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.ls(self._tmpfile, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.mkdirs(self._tmpfile, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.open(self._tmpfile, foo="foo") # type: ignore
with self.assertRaises(ValueError):
PathManager.rm(self._tmpfile, foo="foo") # type: ignore
PathManager.set_strict_kwargs_checking(False)
PathManager.copy(
self._tmpfile,
self._tmpfile,
foo="foo" # type: ignore
)
PathManager.exists(self._tmpfile, foo="foo") # type: ignore
PathManager.get_local_path(self._tmpfile, foo="foo") # type: ignore
PathManager.isdir(self._tmpfile, foo="foo") # type: ignore
PathManager.isfile(self._tmpfile, foo="foo") # type: ignore
PathManager.ls(self._tmpdir, foo="foo") # type: ignore
PathManager.mkdirs(self._tmpdir, foo="foo") # type: ignore
f = PathManager.open(self._tmpfile, foo="foo") # type: ignore
f.close()
# pyre-ignore
with open(os.path.join(self._tmpdir, "test_rm.txt"), "w") as f:
rm_file = f.name
f.write(self._tmpfile_contents)
f.flush()
PathManager.rm(rm_file, foo="foo") # type: ignore
def __init__(self, cfg: AttrDict, data_source: str, path: str, split: str,
dataset_name: str):
super().__init__()
assert PathManager.isdir(path), f"Directory {path} does not exist"
self.dataset_name = dataset_name
self.path = path
self.split = split.lower()
self.dataset = self._load_dataset()
def __init__(self, cfg: AttrDict, path: str, split: str, dataset_name="fastmri_dataset", data_source="fastmri"):
super(FastMRIDataSet, self).__init__()
assert PathManager.isdir(path), f"Directory {path} does not exist"
self.dataset_name = "singlecoil"
self.data_source = "fastmri"
self.path = path
data = cfg.get("DATA", AttrDict({}))
self.key = data.get("KEY", "reconstruction_esc")
self.index = data.get("INDEX", 12)
self.split = split.lower()
self.dataset = self._load_data()
def __init__(self, cfg):
"""
Args:
cfg (CfgNode): configs. Details can be found in
slowfast/config/defaults.py
"""
self.source = PathManager.get_local_path(path=cfg.DEMO.INPUT_VIDEO)
self.fps = None
if PathManager.isdir(self.source):
self.fps = cfg.DEMO.FPS
self.video_name = self.source.split("/")[-1]
self.source = os.path.join(self.source,
"{}_%06d.jpg".format(self.video_name))
else:
self.video_name = self.source.split("/")[-1]
self.video_name = self.video_name.split(".")[0]
self.cfg = cfg
self.cap = cv2.VideoCapture(self.source)
if self.fps is None:
self.fps = self.cap.get(cv2.CAP_PROP_FPS)
self.total_frames = int(self.cap.get(cv2.CAP_PROP_FRAME_COUNT))
self.display_width = int(self.cap.get(cv2.CAP_PROP_FRAME_WIDTH))
self.display_height = int(self.cap.get(cv2.CAP_PROP_FRAME_HEIGHT))
if not self.cap.isOpened():
raise IOError("Video {} cannot be opened".format(self.source))
self.output_file = None
if cfg.DEMO.OUTPUT_FILE != "":
self.output_file = self.get_output_file(cfg.DEMO.OUTPUT_FILE)
self.pred_boxes, self.gt_boxes = load_boxes_labels(
cfg,
self.video_name,
self.fps,
self.display_width,
self.display_height,
)
self.seq_length = cfg.DATA.NUM_FRAMES * cfg.DATA.SAMPLING_RATE
self.no_frames_repeat = cfg.DEMO.SLOWMO
def load_checkpoint(
checkpoint_path: str, device: torch.device = CPU_DEVICE
) -> Optional[Dict]:
"""Loads a checkpoint from the specified checkpoint path.
Args:
checkpoint_path: The path to load the checkpoint from. Can be a file or a
directory. If it is a directory, the checkpoint is loaded from
:py:data:`CHECKPOINT_FILE` inside the directory.
device: device to load the checkpoint to
Returns:
The checkpoint, if it exists, or None.
"""
if not checkpoint_path:
return None
assert device is not None, "Please specify what device to load checkpoint on"
assert device.type in ["cpu", "cuda"], f"Unknown device: {device}"
if device.type == "cuda":
assert torch.cuda.is_available()
if not PathManager.exists(checkpoint_path):
logging.warning(f"Checkpoint path {checkpoint_path} not found")
return None
if PathManager.isdir(checkpoint_path):
checkpoint_path = f"{checkpoint_path.rstrip('/')}/{CHECKPOINT_FILE}"
if not PathManager.exists(checkpoint_path):
logging.warning(f"Checkpoint file {checkpoint_path} not found.")
return None
logging.info(f"Attempting to load checkpoint from {checkpoint_path}")
# load model on specified device and not on saved device for model and return
# the checkpoint
with PathManager.open(checkpoint_path, "rb") as f:
checkpoint = torch.load(f, map_location=device)
logging.info(f"Loaded checkpoint from {checkpoint_path}")
return checkpoint