Python distL2Squared3 Examples

Programming Language: Python

Namespace/Package Name: geometry

Method/Function: distL2Squared3

Examples at hotexamples.com: 1

Python distL2Squared3 - 1 examples found. These are the top rated real world Python examples of geometry.distL2Squared3 extracted from open source projects. You can rate examples to help us improve the quality of examples.

Example #1

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File: mol2.py Project: ryancoleman/tdt_part3

 def getRMSD(self, xyzOne, xyzTwo):
   '''calculates just the rmsd of the two conformations'''
   sumSquared = 0.0
   for atomIndex in xrange(len(self.atomXyz[xyzOne])):
     sumSquared += geometry.distL2Squared3(
         self.atomXyz[xyzOne][atomIndex], self.atomXyz[xyzTwo][atomIndex])
   rmsd = (sumSquared / len(self.atomXyz[xyzOne])) ** 0.5
   return rmsd