Example #1
0
 def clean_category(self):
     category_name = self.cleaned_data['category']
     if not category_name:
         del self.cleaned_data['category']
         return
     if category_name not in CATEGORIES.keys() + CRYSPER_CATEGORIES.keys():
         raise ValidationError('You must choose a valid category')
     return category_name
Example #2
0
def _get_category_name(category):
    if category[0] in SPECIAL_SEARCH_CATEGORIES:
        return category[0]
    for name, category_def in CATEGORIES.items():
        if category == category_def:
            return name
    for name, category_def in CRYSPER_CATEGORIES.items():
        if category == category_def:
            return name
    return '{0}: {1}'.format(category[0], ','.join(category))
    raise ValueError('The given category not in the CATEGORY dictionary')
Example #3
0
    def gb_category(self):
        if (self.level != LEVEL_0 or self.type.name == VECTOR_TYPE_NAME or
                self.type.name == OTHER_TYPE_NAME):
            return self.type.name
        type_ = self.type.name
        prefix = self.prefix
        suffix = self.suffix

        for category, values in CATEGORIES.items():
            if values == (type_, prefix, suffix):
                return category.strip()
        for category, values in CRYSPER_CATEGORIES.items():
            if values == (type_, prefix, suffix):
                return category.strip()
Example #4
0
def _check_category(type_name, prefix, suffix, vector):
    if type_name in (OTHER_TYPE_NAME, VECTOR_TYPE_NAME):
        return True

    for values in CATEGORIES.values():
        if values == (type_name, prefix, suffix):
            return True
    for values in CRYSPER_CATEGORIES.values():
        if values == (type_name, prefix, suffix):
            return True
    if (type_name, prefix, suffix) in ((TU_TYPE_NAME, 'GGAG', 'GTCA'),
                                       (TU_TYPE_NAME, 'GTCA', 'CGCT'),
                                       (MODULE_TYPE_NAME, 'GGAG', 'GTCA'),
                                       (MODULE_TYPE_NAME, 'GTCA', 'CGCT')):
        return True
    return False