def test_negative_idx(self, nspikes, incorrect_spikes_p, positions):
if nspikes == 0:
return
# Prepare negative times
neg_times, neg_spike_pos = self.inject_at_random_pos(
incorrect_spikes_p, nspikes, positions, -10, np.nan)
# Do actual test - must be element-wise to test for NaNs
their_spike_pos, m_i = extractSpikePositions(neg_times, positions)
np.testing.assert_equal(their_spike_pos.x, neg_spike_pos.x)
np.testing.assert_equal(their_spike_pos.y, neg_spike_pos.y)
def test_out_of_bounds_idx(self, nspikes, incorrect_spikes_p, positions):
if nspikes == 0:
return
# Prepare out of bound times
out_times, out_spike_pos = self.inject_at_random_pos(
incorrect_spikes_p, nspikes, positions,
len(positions) * positions.dt, np.nan)
# Do actual test - must be element-wise to test for NaNs
their_spike_pos, m_i = extractSpikePositions(out_times, positions)
np.testing.assert_equal(their_spike_pos.x, out_spike_pos.x)
np.testing.assert_equal(their_spike_pos.y, out_spike_pos.y)
def test_out_of_bounds_idx(self, nspikes, incorrect_spikes_p, positions):
if nspikes == 0:
return
# Prepare out of bound times
out_times, out_spike_pos = self.inject_at_random_pos(
incorrect_spikes_p,
nspikes,
positions,
len(positions)*positions.dt,
np.nan)
# Do actual test - must be element-wise to test for NaNs
their_spike_pos, m_i = extractSpikePositions(out_times, positions)
np.testing.assert_equal(their_spike_pos.x, out_spike_pos.x)
np.testing.assert_equal(their_spike_pos.y, out_spike_pos.y)
def test_negative_idx(self, nspikes, incorrect_spikes_p, positions):
if nspikes == 0:
return
# Prepare negative times
neg_times, neg_spike_pos = self.inject_at_random_pos(
incorrect_spikes_p,
nspikes,
positions,
-10,
np.nan)
# Do actual test - must be element-wise to test for NaNs
their_spike_pos, m_i = extractSpikePositions(neg_times, positions)
np.testing.assert_equal(their_spike_pos.x, neg_spike_pos.x)
np.testing.assert_equal(their_spike_pos.y, neg_spike_pos.y)
def test_correct_extraction(self, nspikes, positions):
spike_times = self.get_correct_spike_times(nspikes, positions)
spike_pos, m_i = extractSpikePositions(spike_times, positions)
# TODO: get rid of code duplication
ref_spike_pos = self.reference_spike_pos(spike_times, positions)
assert spike_pos == ref_spike_pos
def test_correct_extraction(self, nspikes, positions):
spike_times = self.get_correct_spike_times(nspikes, positions)
spike_pos, m_i = extractSpikePositions(spike_times, positions)
# TODO: get rid of code duplication
ref_spike_pos = self.reference_spike_pos(spike_times, positions)
assert spike_pos == ref_spike_pos
