Python Track Examples

Example #1

File: TrackGenomeElementSource.py Project: henrikgs/gtrackcore

 def _getTrack(self):
     track = Track(self._trackName)
     track.addFormatReq(TrackFormatReq(allowOverlaps=self._allowOverlaps))
     return track

Example #2

File: TestTrackPreProcessor.py Project: henrikgs/gtrackcore

 def _getTrackView(self, trackName, region, allowOverlaps):
     track = Track(trackName)
     track.addFormatReq(TrackFormatReq(allowOverlaps=allowOverlaps))
     return track.getTrackView(region)

Example #3

File: TrackOperations.py Project: henrikgs/gtrackcore

def get_track_view(track_name, allow_overlaps, genome_region):
    track = Track(track_name)
    track.addFormatReq(TrackFormatReq(allowOverlaps=allow_overlaps, borderHandling='crop'))
    return track.getTrackView(genome_region)