Python raw_qc_session Examples

Example #1

File: experimental_data.py Project: eejd/ibllib

def raw_ephys_qc(root_data_folder, dry=False, max_sessions=10, force=False):
    """
    Computes raw electrophysiology QC
    """
    qcflags = Path(root_data_folder).rglob('raw_ephys_qc.flag')
    c = 0
    for qcflag in qcflags:
        session_path = qcflag.parent
        c += 1
        if c >= max_sessions:
            return
        if dry:
            print(qcflag.parent)
            continue
        qc_files = ephysqc.raw_qc_session(session_path, dry=dry, force=force)
        qcflag.unlink()
        flags.write_flag_file(session_path.joinpath('register_me.flag'), file_list=qc_files)

Example #2

File: ephys_preprocessing.py Project: k1o0/ibllib

 def _run(self, overwrite=False):
     qc_files = ephysqc.raw_qc_session(self.session_path,
                                       overwrite=overwrite)
     return qc_files