Python bulk Examples

Example #1

def extract(root_data_folder, dry=False):
    """
    Extracts behaviour only
    """
    extract_session.bulk(root_data_folder,
                         dry=dry,
                         glob_flag='**/extract_me.flag')

Example #2

def extract_ephys(root_data_folder, dry=False, max_sessions=10):
    """
    Extracts ephys session only
    """
    extract_session.bulk(root_data_folder,
                         dry=dry,
                         glob_flag='**/extract_ephys.flag')

Example #3

def extract(root_data_folder, dry=False):
    extract_session.bulk(root_data_folder, dry=dry)

Example #4

File: test_ephys_extraction.py Project: anne-urai/iblscripts

 def test_sync_extract(self):
     session_path = self.session_path
     ibllib.io.flags.create_extract_flags(session_path, force=True)
     extract_session.bulk(self.session_path)
     one = ONE(base_url='https://test.alyx.internationalbrainlab.org')
     iblrig_pipeline.register(session_path, one=one)