def ingest_products(): valid_uuids = [] for uuid, ls5_dataset_path in example_ls5_dataset_paths.items(): valid_uuids.append(uuid) index_dataset(ls5_dataset_path) # Ensure that datasets are actually indexed ensure_datasets_are_indexed(index, valid_uuids) # Ingest them clirunner(['ingest', '--config-file', str(config_path)]) # Validate that the ingestion is working as expected datasets = index.datasets.search_eager(product='ls5_nbar_albers') assert len(datasets) > 0 assert datasets[0].managed check_open_with_api(index, len(valid_uuids)) check_data_with_api(index, len(valid_uuids)) # NetCDF specific checks, based on the saved NetCDF file ds_path = str(datasets[0].local_path) with netCDF4.Dataset(ds_path) as nco: check_data_shape(nco) check_grid_mapping(nco) check_cf_compliance(nco) check_dataset_metadata_in_storage_unit(nco, example_ls5_dataset_paths) check_attributes(nco, config['global_attributes']) name = config['measurements'][0]['name'] check_attributes(nco[name], config['measurements'][0]['attrs']) check_open_with_xarray(ds_path)
def index_products(): valid_uuids = [] for uuid, ls5_dataset_path in example_ls5_dataset_paths.items(): valid_uuids.append(uuid) index_dataset(ls5_dataset_path) # Ensure that datasets are actually indexed ensure_datasets_are_indexed(index, valid_uuids) return valid_uuids
def test_index_out_of_bound_error(clirunner, index, tmpdir, example_ls5_dataset_paths, ingest_configs): """ Test for the case where ingestor processes upto `--queue-size` number of tasks and not all the available scenes """ # Make a test ingestor configuration config = INGESTER_CONFIGS / ingest_configs['ls5_nbar_albers'] config_path, config = prepare_test_ingestion_configuration(tmpdir, None, config, mode='fast_ingest') def index_dataset(path): return clirunner(['dataset', 'add', str(path)]) # Set the queue size to process 5 tiles queue_size = 5 valid_uuids = [] for uuid, ls5_dataset_path in example_ls5_dataset_paths.items(): valid_uuids.append(uuid) index_dataset(ls5_dataset_path) # Ensure that datasets are actually indexed ensure_datasets_are_indexed(index, valid_uuids) # Locationless scenario within database arises when we run the sync tool (with --update-location option) # on the disk where the actual file is removed and regenerated again with new dataset id. for indexed_uuid in valid_uuids: dc1 = datacube.Datacube(index=index) datasets = dc1.find_datasets(product='ls5_nbar_scene') try: # Remove location from the index, to simulate indexed out of range scenario res = dc1.index.datasets.remove_location(indexed_uuid, datasets[0].local_uri) except AttributeError: # Do for one dataset, ignore any other attribute errors pass assert res is True, "Error for %r. output: %r" % (indexed_uuid, res) # Ingest scenes with locationless dataset clirunner([ 'ingest', '--config-file', str(config_path), '--queue-size', queue_size, '--allow-product-changes', ]) # Validate that the ingestion is working as expected datasets = index.datasets.search_eager(product='ls5_nbar_albers') assert len(datasets) > 0 assert datasets[0].managed check_open_with_api(index, len(valid_uuids)) # NetCDF specific checks, based on the saved NetCDF file ds_path = str(datasets[0].local_path) with netCDF4.Dataset(ds_path) as nco: check_data_shape(nco) check_grid_mapping(nco) check_cf_compliance(nco) check_dataset_metadata_in_storage_unit(nco, example_ls5_dataset_paths) check_attributes(nco, config['global_attributes']) name = config['measurements'][0]['name'] check_attributes(nco[name], config['measurements'][0]['attrs']) check_open_with_xarray(ds_path)