def MultiFileDialog(title):
#hide/show debug prints
verbose = 0
# Choose image file(s) to open
fc = JFileChooser()
fc.setMultiSelectionEnabled(True)
fc.setDialogTitle(title)
sdir = OpenDialog.getDefaultDirectory()
if sdir!=None:
fdir = File(sdir)
if fdir!=None:
fc.setCurrentDirectory(fdir)
returnVal = fc.showOpenDialog(IJ.getInstance())
if returnVal!=JFileChooser.APPROVE_OPTION:
return
files = fc.getSelectedFiles()
paths = []
for i in range(len(files)):
paths.append(os.path.join(files[i].getParent(), files[i].getName()))
if verbose > 0:
for i in range(len(files)):
path = os.path.join(files[i].getParent(), files[i].getName())
print "Path: " + path
return paths
def MultiFileDialog(title):
#hide/show debug prints
verbose = 0
# Choose image file(s) to open
fc = JFileChooser()
fc.setMultiSelectionEnabled(True)
fc.setDialogTitle(title)
sdir = OpenDialog.getDefaultDirectory()
if sdir != None:
fdir = File(sdir)
if fdir != None:
fc.setCurrentDirectory(fdir)
returnVal = fc.showOpenDialog(IJ.getInstance())
if returnVal != JFileChooser.APPROVE_OPTION:
return
files = fc.getSelectedFiles()
paths = []
for i in range(len(files)):
paths.append(os.path.join(files[i].getParent(), files[i].getName()))
if verbose > 0:
for i in range(len(files)):
path = os.path.join(files[i].getParent(), files[i].getName())
print "Path: " + path
return paths
def openFolderDialog(dialogTitle):
from javax.swing import JFileChooser
chooser = JFileChooser()
chooser.setMultiSelectionEnabled(True)
chooser.setFileSelectionMode(JFileChooser.DIRECTORIES_ONLY)
chooser.setDialogTitle(dialogTitle)
if chooser.showOpenDialog(None) == JFileChooser.APPROVE_OPTION:
folderPathStrings = []
for folderPath in chooser.getSelectedFiles():
folderPathStrings.append(str(folderPath))
return folderPathStrings
def multiple_file_location_chooser(default_directory):
"""choose input data location with potential for being split over multiple files"""
chooser = JFileChooser(default_directory);
chooser.setDialogTitle("Choose one or more tiff files representing the data...");
ext_filter = FileNameExtensionFilter("*.tif", ["tif", "tiff"]);
chooser.setFileFilter(ext_filter);
chooser.setMultiSelectionEnabled(True);
chooser.showOpenDialog(None);
file_paths = [f.toString() for f in chooser.getSelectedFiles()];
if file_paths is None or len(file_paths)==0:
raise IOError('no input file chosen');
return file_paths;
def actionPerformed(self, actionEvent):
global yara_rules
global yara_path
if actionEvent.getSource() is self.menuItem:
yara_path = self._yara_exe_txtField.getText()
yara_rules = self._yara_rules_files
t = Thread(self)
t.start()
elif actionEvent.getSource() is self._yara_clear_button:
# Delete the LogEntry objects from the log
row = self._log.size()
self._lock.acquire()
self._log.clear()
# Update the Table
self.fireTableRowsDeleted(0, row)
# Clear data regarding any selected LogEntry objects from the request / response viewers
self._requestViewer.setMessage([], True)
self._responseViewer.setMessage([], False)
self._currentlyDisplayedItem = None
self._lock.release()
elif actionEvent.getSource() is self._yara_rules_select_files_button:
fileChooser = JFileChooser()
yarFilter = FileNameExtensionFilter("Yara Rules", ["yar"])
fileChooser.addChoosableFileFilter(yarFilter)
fileChooser.setFileFilter(yarFilter)
fileChooser.setMultiSelectionEnabled(True)
fileChooser.setFileSelectionMode(JFileChooser.FILES_ONLY)
ret = fileChooser.showOpenDialog(None)
if ret == JFileChooser.APPROVE_OPTION:
self._yara_rules_files.clear()
for file in fileChooser.getSelectedFiles():
self._yara_rules_files.add(file.getPath())
self._yara_rules_fileList.setListData(self._yara_rules_files)
else:
stdout.println("Unknown Event Received.")
frame = JFrame("CCM scoring")
frame.getContentPane().add(JScrollPane(all))
frame.pack()
frame.addWindowListener( Closing() )
scoreField.requestFocusInWindow()
# Get the grid files
chooser = JFileChooser()
chooser.setDialogTitle("Choose plate grids")
chooser.setMultiSelectionEnabled(True)
chooser.setCurrentDirectory( File(os.path.expanduser("~")))
chooser.showOpenDialog(JPanel())
# This is a hack to get a file path from the
# sun.awt.shell.DefaultShellFolder object returned by the chooser
fp = [str(i) for i in chooser.getSelectedFiles()]
if len(fp) != 0:
gd = GenericDialog("Name your output file")
gd.addStringField("Score file name", "scores.csv")
gd.showDialog()
if not gd.wasCanceled():
scoreFile = gd.getNextString()
scoreFile = os.path.join( os.path.split(fp[0])[0], scoreFile)
cropDir = os.path.splitext( scoreFile)[0] + "_cropped"
# Initialize the grid readers
plateGrid = GridSet(fp,scoreFile,cropDir)
plateGrid.openNext()
# Show the GUI
frame.setVisible(True)
else:
