Python JointSnvMixReader.get_parameters Examples

Example #1

File: plot_paramters.py Project: aroth85/joint-snv-mix.release

def main( jsm_file_name, prefix ):
    reader = JointSnvMixReader( jsm_file_name )    
    parameters = reader.get_parameters()    
    reader.close()
    
    n = 100
    
    global a, b 
    a = np.linspace( 0, n, n + 1 )
    b = n - a
    
    a = a.reshape( ( a.size, 1 ) )
    b = b.reshape( ( b.size, 1 ) )

    recursive_plot( parameters, prefix )

Example #2

File: extract_jsm_paramters.py Project: aroth85/joint-snv-mix.release

def extract_jsm_parameters( args ):
    reader = JointSnvMixReader( args.jsm_file_name )    
    parameters = reader.get_parameters()    
    reader.close()
    
    recursive_print( parameters )